RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 KIF2AO00139 706 aaPredicted RBP11.15□□□□□ -0.63
CLTCL1-211ENST00000621271 TNFAIP1Q13829 316 aa11.15□□□□□ -0.63
CLTCL1-211ENST00000621271 DPH6Q7L8W6 267 aa11.15□□□□□ -0.63
CLTCL1-211ENST00000621271 CCDC113Q9H0I3 377 aa11.15□□□□□ -0.63
CLTCL1-211ENST00000621271 SPC25Q9HBM1 224 aa11.15□□□□□ -0.63
CLTCL1-211ENST00000621271 DDX19AQ9NUU7 478 aaKnown RBP11.15□□□□□ -0.63
CLTCL1-211ENST00000621271 TFIP11Q9UBB9 837 aaKnown RBP11.15□□□□□ -0.63
CLTCL1-211ENST00000621271 MLH3Q9UHC1 1453 aa11.15□□□□□ -0.63
CLTCL1-211ENST00000621271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 ALS2CR12Q96Q35 445 aa11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 SLC5A4Q9NY91 659 aa11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 PRPF4BQ13523 1007 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 TTC22Q5TAA0 569 aa11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 HS2ST1Q7LGA3 356 aa11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 TSNARE1Q96NA8 513 aa11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 BIN1O00499 593 aa11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 ARHGEF6Q15052 776 aa11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 PUM3Q15397 648 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 DYDC1Q8WWB3 177 aa11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 DDX17Q92841 729 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 TFCP2Q12800 502 aa11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 ZYXQ15942 572 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 NAP1L4Q99733 375 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 LRRC2Q9BYS8 371 aa11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 GOPCQ9HD26 462 aa11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 YEATS2Q9ULM3 1422 aa11.14□□□□□ -0.63
CLTCL1-211ENST00000621271 ATP7AQ04656 1500 aa11.13□□□□□ -0.63
CLTCL1-211ENST00000621271 ZBED4O75132 1171 aa11.13□□□□□ -0.63
CLTCL1-211ENST00000621271 PLVAPQ9BX97 442 aa11.13□□□□□ -0.63
CLTCL1-211ENST00000621271 ASIC1P78348 528 aa11.13□□□□□ -0.63
CLTCL1-211ENST00000621271 ZSCAN16Q9H4T2 348 aaPredicted RBP11.13□□□□□ -0.63
CLTCL1-211ENST00000621271 KIAA0754O94854 1291 aa11.13□□□□□ -0.63
CLTCL1-211ENST00000621271 KIF4BQ2VIQ3 1234 aa11.13□□□□□ -0.63
CLTCL1-211ENST00000621271 RBM8AQ9Y5S9 174 aaKnown RBP11.13□□□□□ -0.63
CLTCL1-211ENST00000621271 STAMBPO95630 424 aa11.13□□□□□ -0.63
CLTCL1-211ENST00000621271 CCDC24Q8N4L8 307 aa11.13□□□□□ -0.63
CLTCL1-211ENST00000621271 MRVI1Q9Y6F6 885 aa11.13□□□□□ -0.63
CLTCL1-211ENST00000621271 ARAP3Q8WWN8 1544 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 MSANTD4Q8NCY6 345 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 RGS22Q8NE09 1264 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 PKD2L1Q9P0L9 805 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 USP25Q9UHP3 1055 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 SOS1Q07889 1333 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 TCOF1Q13428 1488 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 GLI2P10070 1586 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 IFFO1Q0D2I5 559 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 RRAGBQ5VZM2 374 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 GIGYF2Q6Y7W6 1299 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 PRIMPOLQ96LW4 560 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 GINS2Q9Y248 185 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 CFAP43Q8NDM7 1665 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 MBD4O95243 580 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 PTPN14Q15678 1187 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 TBC1D9Q6ZT07 1266 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 DNAJC10Q8IXB1 793 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 TBC1D22AQ8WUA7 517 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 TRIM75PA6NK02 468 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 M0QZ92 97 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 SULF1Q8IWU6 871 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 UBXN4Q92575 508 aa11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 DCPSQ96C86 337 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-211ENST00000621271 ANKRD44Q8N8A2 993 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 CRACR2AQ9BSW2 395 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 GPCPD1Q9NPB8 672 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 CGNQ9P2M7 1197 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 ERICH4A6NGS2 130 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 SYKP43405 635 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 AFMP43652 599 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 IFI16Q16666 785 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 OTUD7BQ6GQQ9 843 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 FCHSD1Q86WN1 690 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 C2CD5Q86YS7 1000 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 GBP3Q9H0R5 595 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 SLC52A2Q9HAB3 445 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 TTC41PQ6P2S7 1318 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 PTPDC1A2A3K4 754 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 EYA2O00167 538 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 NLGN1Q8N2Q7 840 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 CNKSR1Q969H4 720 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 CEP83Q9Y592 693 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 N4BP3O15049 544 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 PDE1AP54750 535 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 ZSCAN23Q3MJ62 389 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 BICC1Q9H694 974 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 PSMA7O14818 248 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 AKR1B10O60218 316 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 A1BGP04217 495 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 UVSSAQ2YD98 709 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 FAM196AQ6ZSG2 479 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 MRPL50Q8N5N7 158 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 CCDC102AQ96A19 550 aa11.11□□□□□ -0.63
CLTCL1-211ENST00000621271 SHANK2Q9UPX8 1470 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 SBNO1A3KN83 1393 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 GCOM1H8Y6P7 765 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 DKC1O60832 514 aaKnown RBP eCLIP11.1□□□□□ -0.632e-6■■■■□ 22.2
CLTCL1-211ENST00000621271 MYZAPP0CAP1 466 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 NMIQ13287 307 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 STX1AQ16623 288 aa11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 NAA15Q9BXJ9 866 aaKnown RBP11.1□□□□□ -0.63
CLTCL1-211ENST00000621271 AZI2Q9H6S1 392 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms