RNA–Protein interactions for RNA: ENST00000611468.1

MECP2-212, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-212ENST00000611468 KIF13BQ9NQT8 1826 aa13.46□□□□□ -0.25
MECP2-212ENST00000611468 PDS5AQ29RF7 1337 aaKnown RBP13.46□□□□□ -0.25
MECP2-212ENST00000611468 SEC24BO95487 1268 aa13.46□□□□□ -0.25
MECP2-212ENST00000611468 TTF1Q15361 905 aaPredicted RBP13.46□□□□□ -0.25
MECP2-212ENST00000611468 SLFNL1Q499Z3 407 aa13.46□□□□□ -0.25
MECP2-212ENST00000611468 PODNQ7Z5L7 613 aa13.46□□□□□ -0.25
MECP2-212ENST00000611468 VPS33BQ9H267 617 aa13.46□□□□□ -0.25
MECP2-212ENST00000611468 TAOK3Q9H2K8 898 aa13.46□□□□□ -0.25
MECP2-212ENST00000611468 DUOX1Q9NRD9 1551 aa13.45□□□□□ -0.26
MECP2-212ENST00000611468 RNF113AO15541 343 aaKnown RBP13.45□□□□□ -0.26
MECP2-212ENST00000611468 ECE2O60344 883 aa13.45□□□□□ -0.26
MECP2-212ENST00000611468 IDH1O75874 414 aaKnown RBP13.45□□□□□ -0.26
MECP2-212ENST00000611468 GTF2IP78347 998 aa13.45□□□□□ -0.26
MECP2-212ENST00000611468 ARHGAP27Q6ZUM4 889 aa13.45□□□□□ -0.26
MECP2-212ENST00000611468 TICAM2Q86XR7 235 aa13.45□□□□□ -0.26
MECP2-212ENST00000611468 LARGE2Q8N3Y3 721 aa13.45□□□□□ -0.26
MECP2-212ENST00000611468 WDR66Q8TBY9 1149 aa13.45□□□□□ -0.26
MECP2-212ENST00000611468 LRP2BPQ9P2M1 347 aa13.45□□□□□ -0.26
MECP2-212ENST00000611468 ABCF2Q9UG63 623 aa13.45□□□□□ -0.26
MECP2-212ENST00000611468 FAM205AQ6ZU69 1335 aa13.44□□□□□ -0.26
MECP2-212ENST00000611468 COL1A1P02452 1464 aaPredicted RBP13.44□□□□□ -0.26
MECP2-212ENST00000611468 YBX3P16989 372 aaKnown RBP eCLIP13.44□□□□□ -0.26
MECP2-212ENST00000611468 IARSP41252 1262 aaKnown RBP13.44□□□□□ -0.26
MECP2-212ENST00000611468 PRELPP51888 382 aa13.44□□□□□ -0.26
MECP2-212ENST00000611468 NMIQ13287 307 aaPredicted RBP13.44□□□□□ -0.26
MECP2-212ENST00000611468 GRIK5Q16478 980 aa13.44□□□□□ -0.26
MECP2-212ENST00000611468 SLC9C2Q5TAH2 1124 aa13.44□□□□□ -0.26
MECP2-212ENST00000611468 TTLL5Q6EMB2 1281 aa13.44□□□□□ -0.26
MECP2-212ENST00000611468 CWC27Q6UX04 472 aaKnown RBP13.44□□□□□ -0.26
MECP2-212ENST00000611468 FAM227BQ96M60 508 aa13.44□□□□□ -0.26
MECP2-212ENST00000611468 KIAA1551Q9HCM1 1747 aa13.44□□□□□ -0.26
MECP2-212ENST00000611468 SPEF2Q9C093 1822 aa13.43□□□□□ -0.26
MECP2-212ENST00000611468 LRRC37AA6NMS7 1700 aa13.43□□□□□ -0.26
MECP2-212ENST00000611468 YDJCA8MPS7 323 aa13.43□□□□□ -0.26
MECP2-212ENST00000611468 HIP1O00291 1037 aa13.43□□□□□ -0.26
MECP2-212ENST00000611468 PDE6AP16499 860 aa13.43□□□□□ -0.26
MECP2-212ENST00000611468 RASSF7Q02833 373 aa13.43□□□□□ -0.26
MECP2-212ENST00000611468 MAP3K12Q12852 859 aa13.43□□□□□ -0.26
MECP2-212ENST00000611468 CASC1Q6TDU7 716 aa13.43□□□□□ -0.26
MECP2-212ENST00000611468 ESYT1Q9BSJ8 1104 aa13.43□□□□□ -0.26
MECP2-212ENST00000611468 MXD3Q9BW11 206 aa13.43□□□□□ -0.26
MECP2-212ENST00000611468 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.43□□□□□ -0.26
MECP2-212ENST00000611468 IL25Q9H293 177 aa13.43□□□□□ -0.26
MECP2-212ENST00000611468 DIAPH3Q9NSV4 1193 aa13.43□□□□□ -0.26
MECP2-212ENST00000611468 RAI14Q9P0K7 980 aa13.43□□□□□ -0.26
MECP2-212ENST00000611468 LTBP3Q9NS15 1303 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 SALL1Q9NSC2 1324 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 A0A0D9SFI3 127 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 TCRBV5S4A2TA0A5A2 114 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 ZFYP08048 801 aaPredicted RBP13.42□□□□□ -0.26
MECP2-212ENST00000611468 ADD2P35612 726 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 UBE3CQ15386 1083 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 LRRFIP1Q32MZ4 808 aaKnown RBP13.42□□□□□ -0.26
MECP2-212ENST00000611468 MFSD14BQ5SR56 506 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 ZMYM1Q5SVZ6 1142 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 STRIP1Q5VSL9 837 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 SPTY2D1Q68D10 685 aaPredicted RBP13.42□□□□□ -0.26
MECP2-212ENST00000611468 ZSCAN25Q6NSZ9 544 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 ERICH6Q7L0X2 663 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 MAGEB6Q8N7X4 407 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 ZNF384Q8TF68 577 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 FBXW7Q969H0 707 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 SEC62Q99442 399 aaKnown RBP13.42□□□□□ -0.26
MECP2-212ENST00000611468 ZNRF3Q9ULT6 936 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 LTBP1Q14766 1721 aa13.42□□□□□ -0.26
MECP2-212ENST00000611468 GOLGB1Q14789 3259 aaKnown RBP13.41□□□□□ -0.26
MECP2-212ENST00000611468 USP17L3A6NCW0 530 aa13.41□□□□□ -0.26
MECP2-212ENST00000611468 USP17L4A6NCW7 530 aa13.41□□□□□ -0.26
MECP2-212ENST00000611468 SGSM2O43147 1006 aa13.41□□□□□ -0.26
MECP2-212ENST00000611468 PRDX5P30044 214 aa13.41□□□□□ -0.26
MECP2-212ENST00000611468 MECOMQ03112 1051 aa13.41□□□□□ -0.26
MECP2-212ENST00000611468 DACT2Q5SW24 774 aa13.41□□□□□ -0.26
MECP2-212ENST00000611468 USP17L1Q7RTZ2 530 aa13.41□□□□□ -0.26
MECP2-212ENST00000611468 NIM1KQ8IY84 436 aa13.41□□□□□ -0.26
MECP2-212ENST00000611468 ZGPATQ8N5A5 531 aaKnown RBP13.41□□□□□ -0.26
MECP2-212ENST00000611468 CERS5Q8N5B7 392 aa13.41□□□□□ -0.26
MECP2-212ENST00000611468 TBC1D22AQ8WUA7 517 aa13.41□□□□□ -0.26
MECP2-212ENST00000611468 RUFY2Q8WXA3 655 aa13.41□□□□□ -0.26
MECP2-212ENST00000611468 OSBP2Q969R2 916 aa13.41□□□□□ -0.26
MECP2-212ENST00000611468 HELLSQ9NRZ9 838 aa13.41□□□□□ -0.26
MECP2-212ENST00000611468 ZNF532Q9HCE3 1301 aa13.4□□□□□ -0.26
MECP2-212ENST00000611468 RAD17O75943 681 aa13.4□□□□□ -0.26
MECP2-212ENST00000611468 LDHBP07195 334 aaKnown RBP13.4□□□□□ -0.26
MECP2-212ENST00000611468 CYP7A1P22680 504 aa13.4□□□□□ -0.26
MECP2-212ENST00000611468 MCMDC2Q4G0Z9 681 aa13.4□□□□□ -0.26
MECP2-212ENST00000611468 JDP2Q8WYK2 163 aa13.4□□□□□ -0.26
MECP2-212ENST00000611468 APPBP2Q92624 585 aa13.4□□□□□ -0.26
MECP2-212ENST00000611468 NSUN4Q96CB9 384 aaKnown RBP13.4□□□□□ -0.26
MECP2-212ENST00000611468 PUS7LQ9H0K6 701 aaKnown RBP13.4□□□□□ -0.26
MECP2-212ENST00000611468 RFX7Q2KHR2 1363 aa13.4□□□□□ -0.26
MECP2-212ENST00000611468 M0R2C6 588 aa13.39□□□□□ -0.27
MECP2-212ENST00000611468 CXCL9Q07325 125 aa13.39□□□□□ -0.27
MECP2-212ENST00000611468 GPR162Q16538 588 aa13.39□□□□□ -0.27
MECP2-212ENST00000611468 NAA16Q6N069 864 aaPredicted RBP13.39□□□□□ -0.27
MECP2-212ENST00000611468 CCDC129Q6ZRS4 1044 aa13.39□□□□□ -0.27
MECP2-212ENST00000611468 SUGT1Q9Y2Z0 365 aa13.39□□□□□ -0.27
MECP2-212ENST00000611468 DLEC1Q9Y238 1755 aa13.39□□□□□ -0.27
MECP2-212ENST00000611468 IGSF3O75054 1194 aa13.38□□□□□ -0.27
MECP2-212ENST00000611468 VIL1P09327 827 aaKnown RBP13.38□□□□□ -0.27
MECP2-212ENST00000611468 LMNB1P20700 586 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms