RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 RESTQ13127 1097 aa28.04■■■□□ 2.08
HOXA4-204ENST00000610970 ATL3Q6DD88 541 aa28.04■■■□□ 2.08
HOXA4-204ENST00000610970 FERMT3Q86UX7 667 aa28.04■■■□□ 2.08
HOXA4-204ENST00000610970 ZSCAN30Q86W11 494 aa28.04■■■□□ 2.08
HOXA4-204ENST00000610970 LRRC2Q9BYS8 371 aa28.04■■■□□ 2.08
HOXA4-204ENST00000610970 FOXP2O15409 715 aa28.04■■■□□ 2.08
HOXA4-204ENST00000610970 GPAA1O43292 621 aa28.04■■■□□ 2.08
HOXA4-204ENST00000610970 CCDC102BQ68D86 513 aa28.04■■■□□ 2.08
HOXA4-204ENST00000610970 NGLY1Q96IV0 654 aa28.04■■■□□ 2.08
HOXA4-204ENST00000610970 PUS7LQ9H0K6 701 aaKnown RBP28.04■■■□□ 2.08
HOXA4-204ENST00000610970 CFAP45Q9UL16 551 aa28.04■■■□□ 2.08
HOXA4-204ENST00000610970 PDIA3P30101 505 aaKnown RBP28.03■■■□□ 2.08
HOXA4-204ENST00000610970 MCM5P33992 734 aa28.03■■■□□ 2.08
HOXA4-204ENST00000610970 NCOA7Q8NI08 942 aa28.03■■■□□ 2.08
HOXA4-204ENST00000610970 SPATA32Q96LK8 384 aa28.03■■■□□ 2.08
HOXA4-204ENST00000610970 BCL9LQ86UU0 1499 aa28.02■■■□□ 2.08
HOXA4-204ENST00000610970 ZNF213O14771 459 aa28.02■■■□□ 2.08
HOXA4-204ENST00000610970 RGL2O15211 777 aa28.02■■■□□ 2.08
HOXA4-204ENST00000610970 CCDC152Q4G0S7 254 aa28.02■■■□□ 2.08
HOXA4-204ENST00000610970 TTLL5Q6EMB2 1281 aa28.02■■■□□ 2.08
HOXA4-204ENST00000610970 ZNF652Q9Y2D9 606 aa28.02■■■□□ 2.08
HOXA4-204ENST00000610970 FNBP4Q8N3X1 1017 aaPredicted RBP28.01■■■□□ 2.07
HOXA4-204ENST00000610970 SALL1Q9NSC2 1324 aa28.01■■■□□ 2.07
HOXA4-204ENST00000610970 PTPDC1A2A3K4 754 aa28.01■■■□□ 2.07
HOXA4-204ENST00000610970 GOLGA6L4A6NEF3 574 aa28.01■■■□□ 2.07
HOXA4-204ENST00000610970 SLC9C2Q5TAH2 1124 aa28.01■■■□□ 2.07
HOXA4-204ENST00000610970 RGS22Q8NE09 1264 aa28.01■■■□□ 2.07
HOXA4-204ENST00000610970 LEO1Q8WVC0 666 aaPredicted RBP28.01■■■□□ 2.07
HOXA4-204ENST00000610970 MPHOSPH8Q99549 860 aa28.01■■■□□ 2.07
HOXA4-204ENST00000610970 DDX60Q8IY21 1712 aaKnown RBP28■■■□□ 2.07
HOXA4-204ENST00000610970 DHX16O60231 1041 aaKnown RBP28■■■□□ 2.07
HOXA4-204ENST00000610970 DTNBO60941 627 aa28■■■□□ 2.07
HOXA4-204ENST00000610970 PI16Q6UXB8 463 aa28■■■□□ 2.07
HOXA4-204ENST00000610970 MB21D2Q8IYB1 491 aaPredicted RBP28■■■□□ 2.07
HOXA4-204ENST00000610970 ACSBG1Q96GR2 724 aa28■■■□□ 2.07
HOXA4-204ENST00000610970 CTDNEP1O95476 244 aa27.99■■■□□ 2.07
HOXA4-204ENST00000610970 ITPK1Q13572 414 aa27.99■■■□□ 2.07
HOXA4-204ENST00000610970 CLEC4GQ6UXB4 293 aa27.99■■■□□ 2.07
HOXA4-204ENST00000610970 RALYLQ86SE5 291 aaKnown RBP27.99■■■□□ 2.07
HOXA4-204ENST00000610970 RNF214Q8ND24 703 aa27.99■■■□□ 2.07
HOXA4-204ENST00000610970 FUCA2Q9BTY2 467 aa27.99■■■□□ 2.07
HOXA4-204ENST00000610970 A0A0G2JLW4 131 aa27.98■■■□□ 2.07
HOXA4-204ENST00000610970 PHKA1P46020 1223 aa27.98■■■□□ 2.07
HOXA4-204ENST00000610970 DDX11Q96FC9 970 aa27.98■■■□□ 2.07
HOXA4-204ENST00000610970 PIH1D3Q9NQM4 214 aaKnown RBP27.98■■■□□ 2.07
HOXA4-204ENST00000610970 ZMYM6O95789 1325 aa27.98■■■□□ 2.07
HOXA4-204ENST00000610970 AFF2P51816 1311 aa27.98■■■□□ 2.07
HOXA4-204ENST00000610970 COL5A3P25940 1745 aaPredicted RBP27.98■■■□□ 2.07
HOXA4-204ENST00000610970 ALX1Q15699 326 aa27.98■■■□□ 2.07
HOXA4-204ENST00000610970 DDX19AQ9NUU7 478 aaKnown RBP27.98■■■□□ 2.07
HOXA4-204ENST00000610970 CCDC39Q9UFE4 941 aa27.98■■■□□ 2.07
HOXA4-204ENST00000610970 BCORQ6W2J9 1755 aa27.97■■■□□ 2.07
HOXA4-204ENST00000610970 PRC1O43663 620 aa27.97■■■□□ 2.07
HOXA4-204ENST00000610970 NTSR2O95665 410 aa27.97■■■□□ 2.07
HOXA4-204ENST00000610970 HCLS1P14317 486 aaPredicted RBP27.97■■■□□ 2.07
HOXA4-204ENST00000610970 IGHMBP2P38935 993 aaKnown RBP27.97■■■□□ 2.07
HOXA4-204ENST00000610970 PDE6AP16499 860 aa27.96■■■□□ 2.07
HOXA4-204ENST00000610970 TRDNQ13061 729 aa27.96■■■□□ 2.07
HOXA4-204ENST00000610970 MYH15Q9Y2K3 1946 aa27.96■■■□□ 2.07
HOXA4-204ENST00000610970 DOCK2Q92608 1830 aa27.96■■■□□ 2.07
HOXA4-204ENST00000610970 IDH1O75874 414 aaKnown RBP27.95■■■□□ 2.07
HOXA4-204ENST00000610970 FAM173BQ6P4H8 233 aa27.95■■■□□ 2.07
HOXA4-204ENST00000610970 SPATA5Q8NB90 893 aa27.95■■■□□ 2.07
HOXA4-204ENST00000610970 NOL7Q9UMY1 257 aaKnown RBP27.95■■■□□ 2.07
HOXA4-204ENST00000610970 NIP7Q9Y221 180 aaKnown RBP eCLIP27.95■■■□□ 2.07
HOXA4-204ENST00000610970 MYH14Q7Z406 1995 aaKnown RBP27.95■■■□□ 2.07
HOXA4-204ENST00000610970 ZNF532Q9HCE3 1301 aa27.95■■■□□ 2.07
HOXA4-204ENST00000610970 TCRBV5S4A2TA0A5A2 114 aa27.95■■■□□ 2.06
HOXA4-204ENST00000610970 CCDC192P0DO97 292 aa27.95■■■□□ 2.06
HOXA4-204ENST00000610970 MSNP26038 577 aaKnown RBP27.95■■■□□ 2.06
HOXA4-204ENST00000610970 CCT2P78371 535 aaKnown RBP27.95■■■□□ 2.06
HOXA4-204ENST00000610970 MAP3K12Q12852 859 aa27.95■■■□□ 2.06
HOXA4-204ENST00000610970 ZNF772Q68DY9 489 aaPredicted RBP27.95■■■□□ 2.06
HOXA4-204ENST00000610970 ZNF396Q96N95 335 aaPredicted RBP27.95■■■□□ 2.06
HOXA4-204ENST00000610970 NUP62CLQ9H1M0 184 aa27.95■■■□□ 2.06
HOXA4-204ENST00000610970 TFIP11Q9UBB9 837 aaKnown RBP27.95■■■□□ 2.06
HOXA4-204ENST00000610970 A0A0G2JS52 829 aa27.94■■■□□ 2.06
HOXA4-204ENST00000610970 HAND2P61296 217 aa27.94■■■□□ 2.06
HOXA4-204ENST00000610970 MAP3K11Q16584 847 aa27.92■■■□□ 2.06
HOXA4-204ENST00000610970 GIMAP6Q6P9H5 292 aa27.92■■■□□ 2.06
HOXA4-204ENST00000610970 CDC5LQ99459 802 aaKnown RBP27.92■■■□□ 2.06
HOXA4-204ENST00000610970 USP21Q9UK80 565 aa27.92■■■□□ 2.06
HOXA4-204ENST00000610970 VPS72Q15906 364 aa27.92■■■□□ 2.06
HOXA4-204ENST00000610970 CHST3Q7LGC8 479 aa27.92■■■□□ 2.06
HOXA4-204ENST00000610970 RCOR1Q9UKL0 485 aa27.92■■■□□ 2.06
HOXA4-204ENST00000610970 NAP1L2Q9ULW6 460 aaPredicted RBP27.92■■■□□ 2.06
HOXA4-204ENST00000610970 CARMIL3Q8ND23 1372 aa27.92■■■□□ 2.06
HOXA4-204ENST00000610970 HELBQ8NG08 1087 aaPredicted RBP27.91■■■□□ 2.06
HOXA4-204ENST00000610970 AIDAQ96BJ3 306 aa27.91■■■□□ 2.06
HOXA4-204ENST00000610970 STRBPQ96SI9 672 aaKnown RBP27.91■■■□□ 2.06
HOXA4-204ENST00000610970 ANTXR2P58335 489 aa27.9■■■□□ 2.06
HOXA4-204ENST00000610970 NCOA5Q9HCD5 579 aaKnown RBP27.9■■■□□ 2.06
HOXA4-204ENST00000610970 KLF18A0A0U1RQI7 1052 aa27.89■■■□□ 2.06
HOXA4-204ENST00000610970 PATL2C9JE40 543 aaKnown RBP27.89■■■□□ 2.06
HOXA4-204ENST00000610970 LIG1P18858 919 aa27.89■■■□□ 2.06
HOXA4-204ENST00000610970 RBM43Q6ZSC3 357 aaKnown RBP27.89■■■□□ 2.06
HOXA4-204ENST00000610970 SEC31BQ9NQW1 1179 aa27.89■■■□□ 2.06
HOXA4-204ENST00000610970 MYO5AQ9Y4I1 1855 aaKnown RBP27.89■■■□□ 2.06
HOXA4-204ENST00000610970 GNAT2P19087 354 aa27.89■■■□□ 2.05
HOXA4-204ENST00000610970 ADD1P35611 737 aaKnown RBP27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms