RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	CASQ1	P31415	396 aa		13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	TXLNA	P40222	546 aa		13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	PLA2G4A	P47712	749 aa		13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	FANCC	Q00597	558 aa		13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	ERCC6L	Q2NKX8	1250 aa		13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	SYT10	Q6XYQ8	523 aa		13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	LEKR1	Q6ZMV7	388 aa		13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	RSRC2	Q7L4I2	434 aa	Known RBP	13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	TMC6	Q7Z403	805 aa		13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	MLKL	Q8NB16	471 aa		13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	JARID2	Q92833	1246 aa	Predicted RBP	13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	RPGRIP1	Q96KN7	1286 aa		13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	USP28	Q96RU2	1077 aa		13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	XPO4	Q9C0E2	1151 aa	Known RBP	13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	VIPAS39	Q9H9C1	493 aa		13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	ERBB3	P21860	1342 aa		13.54	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	FAM177B	A6PVY3	158 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	CLSTN1	O94985	981 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	TOP1	P11387	765 aa	Known RBP	13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	CPA1	P15085	419 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	PIP4K2A	P48426	406 aa	Predicted RBP	13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	NLRP6	P59044	892 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	PIP4K2B	P78356	416 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	SMC1A	Q14683	1233 aa	Known RBP	13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	SLC39A14	Q15043	492 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	C1orf141	Q5JVX7	400 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	ARMCX5	Q6P1M9	558 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	TRIM65	Q6PJ69	517 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	HDX	Q7Z353	690 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	CTCFL	Q8NI51	663 aa	Predicted RBP	13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	PANX2	Q96RD6	677 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	CTAGE1	Q96RT6	745 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	MTA3	Q9BTC8	594 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	IFNK	Q9P0W0	207 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	RAB21	Q9UL25	225 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	PCDHA7	Q9UN72	937 aa		13.53	□□□□□ -0.24
U2AF1L4-221	ENST00000601236	USP27X	A6NNY8	438 aa		13.52	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	MAP2K7	O14733	419 aa		13.52	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	ACTN2	P35609	894 aa		13.52	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	UBASH3A	P57075	661 aa		13.52	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	NCAPH	Q15003	741 aa		13.52	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	RPAIN	Q86UA6	219 aa		13.52	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	WASF1	Q92558	559 aa		13.52	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	FMNL2	Q96PY5	1086 aa		13.52	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	PYM1	Q9BRP8	204 aa	Known RBP	13.52	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	TACO1	Q9BSH4	297 aa	Known RBP	13.52	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.52	□□□□□ -0.25	8e-6	■■■□□ 14.7
U2AF1L4-221	ENST00000601236	MRFAP1	Q9Y605	127 aa		13.52	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	PARP3	Q9Y6F1	533 aa		13.52	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	NFAT5	O94916	1531 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	CUTA	O60888	179 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	ZNF202	O95125	648 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	CYP21A2	P08686	494 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	ERCC5	P28715	1186 aa	Predicted RBP	13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	RCAN1	P53805	252 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	HNRNPH2	P55795	449 aa	Known RBP	13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	ZSCAN26	Q16670	478 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	MAP9	Q49MG5	647 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	TNNI3K	Q59H18	835 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	ZMYM1	Q5SVZ6	1142 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	MYSM1	Q5VVJ2	828 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	MSANTD4	Q8NCY6	345 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	C8orf76	Q96K31	380 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	METTL22	Q9BUU2	404 aa	Predicted RBP	13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	GOLPH3L	Q9H4A5	285 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	C19orf44	Q9H6X5	657 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	HPSE	Q9Y251	543 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	CHMP3	Q9Y3E7	222 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	FPGT-TNNI3K	V9GXZ4	949 aa		13.51	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	MARF1	Q9Y4F3	1742 aa	Known RBP	13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	MST1R	Q04912	1400 aa		13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	RNMT	O43148	476 aa	Known RBP	13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	CIAO1	O76071	339 aa		13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	PDIA3	P30101	505 aa	Known RBP	13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	TBX2	Q13207	712 aa	Predicted RBP	13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	TRIM14	Q14142	442 aa		13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	WHAMMP3	Q1A5X7	153 aa		13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	NT5DC1	Q5TFE4	455 aa		13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	ANO1	Q5XXA6	986 aa		13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	CCDC102B	Q68D86	513 aa		13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	ARHGEF25	Q86VW2	580 aa		13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	REXO1L1P	Q8IX06	675 aa		13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	ZNF579	Q8NAF0	562 aa	Known RBP	13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	ENOX1	Q8TC92	643 aa	Known RBP	13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	TRMT1	Q9NXH9	659 aa	Known RBP	13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	PPP2R2C	Q9Y2T4	447 aa		13.5	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	STK36	Q9NRP7	1315 aa		13.49	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	JAK2	O60674	1132 aa		13.49	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	TBC1D8	O95759	1140 aa		13.49	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	BMP15	O95972	392 aa		13.49	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	SERPINC1	P01008	464 aa		13.49	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	CCDC175	P0C221	793 aa		13.49	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	EIF2S2	P20042	333 aa	Known RBP	13.49	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	SYK	P43405	635 aa		13.49	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	TNNT3	P45378	269 aa	Predicted RBP	13.49	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	PPP2R3A	Q06190	1150 aa		13.49	□□□□□ -0.25
U2AF1L4-221	ENST00000601236	RAD51AP2	Q09MP3	1159 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms