RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 PSMD14O00487 310 aa18.25■□□□□ 0.51
ARHGEF1-214ENST00000596957 ERC2O15083 957 aa18.25■□□□□ 0.51
ARHGEF1-214ENST00000596957 STRIP1Q5VSL9 837 aa18.25■□□□□ 0.51
ARHGEF1-214ENST00000596957 TSHZ3Q63HK5 1081 aa18.25■□□□□ 0.51
ARHGEF1-214ENST00000596957 SPATA5Q8NB90 893 aa18.25■□□□□ 0.51
ARHGEF1-214ENST00000596957 DNAJC2Q99543 621 aaKnown RBP18.25■□□□□ 0.51
ARHGEF1-214ENST00000596957 WDR66Q8TBY9 1149 aa18.24■□□□□ 0.51
ARHGEF1-214ENST00000596957 TBC1D22AQ8WUA7 517 aa18.24■□□□□ 0.51
ARHGEF1-214ENST00000596957 ZNF512BQ96KM6 892 aaPredicted RBP18.24■□□□□ 0.51
ARHGEF1-214ENST00000596957 BOLA2Q9H3K6 86 aa18.24■□□□□ 0.51
ARHGEF1-214ENST00000596957 HMG20BQ9P0W2 317 aa18.24■□□□□ 0.51
ARHGEF1-214ENST00000596957 TTC41PQ6P2S7 1318 aa18.23■□□□□ 0.51
ARHGEF1-214ENST00000596957 ATP5JP18859 108 aa18.23■□□□□ 0.51
ARHGEF1-214ENST00000596957 MCAMP43121 646 aa18.23■□□□□ 0.51
ARHGEF1-214ENST00000596957 SCARF1Q14162 830 aa18.23■□□□□ 0.51
ARHGEF1-214ENST00000596957 MFSD14BQ5SR56 506 aa18.23■□□□□ 0.51
ARHGEF1-214ENST00000596957 PI16Q6UXB8 463 aa18.23■□□□□ 0.51
ARHGEF1-214ENST00000596957 GPC2Q8N158 579 aa18.23■□□□□ 0.51
ARHGEF1-214ENST00000596957 FAM205AQ6ZU69 1335 aa18.23■□□□□ 0.51
ARHGEF1-214ENST00000596957 MYO3BQ8WXR4 1341 aa18.23■□□□□ 0.51
ARHGEF1-214ENST00000596957 DDNO94850 711 aaPredicted RBP18.22■□□□□ 0.51
ARHGEF1-214ENST00000596957 DACT2Q5SW24 774 aa18.22■□□□□ 0.51
ARHGEF1-214ENST00000596957 RSBN1LQ6PCB5 846 aaPredicted RBP18.22■□□□□ 0.51
ARHGEF1-214ENST00000596957 ZGPATQ8N5A5 531 aaKnown RBP18.22■□□□□ 0.51
ARHGEF1-214ENST00000596957 MXD3Q9BW11 206 aa18.22■□□□□ 0.51
ARHGEF1-214ENST00000596957 ABCF2Q9UG63 623 aa18.22■□□□□ 0.51
ARHGEF1-214ENST00000596957 ZBTB12Q9Y330 459 aaPredicted RBP18.22■□□□□ 0.51
ARHGEF1-214ENST00000596957 ARAP2Q8WZ64 1704 aa18.22■□□□□ 0.51
ARHGEF1-214ENST00000596957 F8W031 263 aaPredicted RBP18.21■□□□□ 0.51
ARHGEF1-214ENST00000596957 GLRX3O76003 335 aaKnown RBP18.21■□□□□ 0.51
ARHGEF1-214ENST00000596957 VIL1P09327 827 aaKnown RBP18.21■□□□□ 0.51
ARHGEF1-214ENST00000596957 ZAP70P43403 619 aa18.21■□□□□ 0.51
ARHGEF1-214ENST00000596957 GMPSP49915 693 aaPredicted RBP18.21■□□□□ 0.51
ARHGEF1-214ENST00000596957 PDE1AP54750 535 aa18.21■□□□□ 0.51
ARHGEF1-214ENST00000596957 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.21■□□□□ 0.51
ARHGEF1-214ENST00000596957 GLTPD2A6NH11 291 aa18.2■□□□□ 0.5
ARHGEF1-214ENST00000596957 RPS12P25398 132 aaKnown RBP18.2■□□□□ 0.5
ARHGEF1-214ENST00000596957 PDE4AP27815 886 aa18.2■□□□□ 0.5
ARHGEF1-214ENST00000596957 LMOD1P29536 600 aaPredicted RBP18.2■□□□□ 0.5
ARHGEF1-214ENST00000596957 SPTY2D1Q68D10 685 aaPredicted RBP18.2■□□□□ 0.5
ARHGEF1-214ENST00000596957 AGBL3Q8NEM8 1001 aa18.2■□□□□ 0.5
ARHGEF1-214ENST00000596957 ZNF526Q8TF50 670 aaPredicted RBP18.2■□□□□ 0.5
ARHGEF1-214ENST00000596957 LRP2BPQ9P2M1 347 aa18.2■□□□□ 0.5
ARHGEF1-214ENST00000596957 NDUFB9Q9Y6M9 179 aa18.2■□□□□ 0.5
ARHGEF1-214ENST00000596957 TIAM2Q8IVF5 1701 aa18.2■□□□□ 0.5
ARHGEF1-214ENST00000596957 PDS5AQ29RF7 1337 aaKnown RBP18.2■□□□□ 0.5
ARHGEF1-214ENST00000596957 COL1A1P02452 1464 aaPredicted RBP18.2■□□□□ 0.5
ARHGEF1-214ENST00000596957 GOLIM4O00461 696 aa18.19■□□□□ 0.5
ARHGEF1-214ENST00000596957 LDHBP07195 334 aaKnown RBP18.19■□□□□ 0.5
ARHGEF1-214ENST00000596957 RGS3P49796 1198 aa18.19■□□□□ 0.5
ARHGEF1-214ENST00000596957 KIAA0825Q8IV33 1275 aa18.19■□□□□ 0.5
ARHGEF1-214ENST00000596957 PLEKHM2Q8IWE5 1019 aa18.19■□□□□ 0.5
ARHGEF1-214ENST00000596957 OGFOD1Q8N543 542 aa18.19■□□□□ 0.5
ARHGEF1-214ENST00000596957 HAUS7Q99871 368 aa18.19■□□□□ 0.5
ARHGEF1-214ENST00000596957 RAI14Q9P0K7 980 aa18.19■□□□□ 0.5
ARHGEF1-214ENST00000596957 STAP2Q9UGK3 403 aa18.19■□□□□ 0.5
ARHGEF1-214ENST00000596957 HDAC9Q9UKV0 1011 aa18.19■□□□□ 0.5
ARHGEF1-214ENST00000596957 AOX1Q06278 1338 aa18.19■□□□□ 0.5
ARHGEF1-214ENST00000596957 SALL3Q9BXA9 1300 aa18.19■□□□□ 0.5
ARHGEF1-214ENST00000596957 MAP4K4O95819 1239 aaPredicted RBP18.18■□□□□ 0.5
ARHGEF1-214ENST00000596957 FKBP1AP62942 108 aaKnown RBP18.18■□□□□ 0.5
ARHGEF1-214ENST00000596957 TTF1Q15361 905 aaPredicted RBP18.18■□□□□ 0.5
ARHGEF1-214ENST00000596957 TBC1D9Q6ZT07 1266 aa18.18■□□□□ 0.5
ARHGEF1-214ENST00000596957 ERICH6Q7L0X2 663 aa18.18■□□□□ 0.5
ARHGEF1-214ENST00000596957 DZIP1Q86YF9 867 aaKnown RBP18.18■□□□□ 0.5
ARHGEF1-214ENST00000596957 PI4K2BQ8TCG2 481 aa18.18■□□□□ 0.5
ARHGEF1-214ENST00000596957 PAG1Q9NWQ8 432 aa18.18■□□□□ 0.5
ARHGEF1-214ENST00000596957 UTRNP46939 3433 aa18.18■□□□□ 0.5
ARHGEF1-214ENST00000596957 H7C1D1 291 aa18.17■□□□□ 0.5
ARHGEF1-214ENST00000596957 ZBTB22O15209 634 aa18.17■□□□□ 0.5
ARHGEF1-214ENST00000596957 IDH1O75874 414 aaKnown RBP18.17■□□□□ 0.5
ARHGEF1-214ENST00000596957 CYP2E1P05181 493 aaPredicted RBP18.17■□□□□ 0.5
ARHGEF1-214ENST00000596957 USP17L8P0C7I0 530 aa18.17■□□□□ 0.5
ARHGEF1-214ENST00000596957 CERS5Q8N5B7 392 aa18.17■□□□□ 0.5
ARHGEF1-214ENST00000596957 TTF2Q9UNY4 1162 aaKnown RBP18.17■□□□□ 0.5
ARHGEF1-214ENST00000596957 SBF1O95248 1867 aa18.17■□□□□ 0.5
ARHGEF1-214ENST00000596957 SALL1Q9NSC2 1324 aa18.17■□□□□ 0.5
ARHGEF1-214ENST00000596957 TRIM6-TRIM34B2RNG4 842 aa18.16■□□□□ 0.5
ARHGEF1-214ENST00000596957 YY1P25490 414 aa18.16■□□□□ 0.5
ARHGEF1-214ENST00000596957 RBM5P52756 815 aaKnown RBP eCLIP18.16■□□□□ 0.52e-10■■■■□ 20.1
ARHGEF1-214ENST00000596957 MICALL2Q8IY33 904 aa18.16■□□□□ 0.5
ARHGEF1-214ENST00000596957 DPF2Q92785 391 aa18.16■□□□□ 0.5
ARHGEF1-214ENST00000596957 ANTXR1Q9H6X2 564 aa18.16■□□□□ 0.5
ARHGEF1-214ENST00000596957 CNOT7Q9UIV1 285 aaKnown RBP18.16■□□□□ 0.5
ARHGEF1-214ENST00000596957 SUGT1Q9Y2Z0 365 aa18.16■□□□□ 0.5
ARHGEF1-214ENST00000596957 MAST3O60307 1309 aa18.16■□□□□ 0.5
ARHGEF1-214ENST00000596957 IQCA1LA6NCM1 817 aa18.15■□□□□ 0.5
ARHGEF1-214ENST00000596957 PRDX5P30044 214 aa18.15■□□□□ 0.5
ARHGEF1-214ENST00000596957 MAP3K12Q12852 859 aa18.15■□□□□ 0.5
ARHGEF1-214ENST00000596957 SKAP1Q86WV1 359 aa18.15■□□□□ 0.5
ARHGEF1-214ENST00000596957 EDC3Q96F86 508 aaKnown RBP18.15■□□□□ 0.5
ARHGEF1-214ENST00000596957 OSBPL3Q9H4L5 887 aa18.15■□□□□ 0.5
ARHGEF1-214ENST00000596957 PIH1D3Q9NQM4 214 aaKnown RBP18.15■□□□□ 0.5
ARHGEF1-214ENST00000596957 HACL1Q9UJ83 578 aa18.15■□□□□ 0.5
ARHGEF1-214ENST00000596957 CCDC88AQ3V6T2 1871 aa18.14■□□□□ 0.49
ARHGEF1-214ENST00000596957 SCNN1DP51172 638 aa18.14■□□□□ 0.49
ARHGEF1-214ENST00000596957 GRIK5Q16478 980 aa18.14■□□□□ 0.49
ARHGEF1-214ENST00000596957 RBM26Q5T8P6 1007 aaKnown RBP18.14■□□□□ 0.49
ARHGEF1-214ENST00000596957 SLF2Q8IX21 1173 aa18.14■□□□□ 0.49
ARHGEF1-214ENST00000596957 RILPL2Q969X0 211 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms