RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 PLCH2O75038 1416 aa16.52■□□□□ 0.24
SMARCA4-214ENST00000589677 IFT20Q8IY31 132 aa16.52■□□□□ 0.24
SMARCA4-214ENST00000589677 GBP1P32455 592 aa16.52■□□□□ 0.23
SMARCA4-214ENST00000589677 PCK1P35558 622 aa16.52■□□□□ 0.23
SMARCA4-214ENST00000589677 MXRA7P84157 204 aa16.52■□□□□ 0.23
SMARCA4-214ENST00000589677 PAXIP1Q6ZW49 1069 aaPredicted RBP16.52■□□□□ 0.23
SMARCA4-214ENST00000589677 KLHL34Q8N239 644 aa16.52■□□□□ 0.23
SMARCA4-214ENST00000589677 CABS1Q96KC9 395 aa16.52■□□□□ 0.23
SMARCA4-214ENST00000589677 ALDH1L1O75891 902 aa16.51■□□□□ 0.23
SMARCA4-214ENST00000589677 CTNNA2P26232 953 aa16.51■□□□□ 0.23
SMARCA4-214ENST00000589677 RUFY4Q6ZNE9 571 aa16.51■□□□□ 0.23
SMARCA4-214ENST00000589677 TMTC1Q8IUR5 882 aa16.51■□□□□ 0.23
SMARCA4-214ENST00000589677 MKNK2Q9HBH9 465 aa16.51■□□□□ 0.23
SMARCA4-214ENST00000589677 C8orf74Q6P047 294 aa16.51■□□□□ 0.23
SMARCA4-214ENST00000589677 TBC1D5Q92609 795 aa16.51■□□□□ 0.23
SMARCA4-214ENST00000589677 PHF23Q9BUL5 403 aaPredicted RBP16.51■□□□□ 0.23
SMARCA4-214ENST00000589677 CNNM2Q9H8M5 875 aa16.51■□□□□ 0.23
SMARCA4-214ENST00000589677 KRI1Q8N9T8 703 aaKnown RBP16.51■□□□□ 0.23
SMARCA4-214ENST00000589677 GPT2Q8TD30 523 aa16.51■□□□□ 0.23
SMARCA4-214ENST00000589677 MMRN2Q9H8L6 949 aa16.51■□□□□ 0.23
SMARCA4-214ENST00000589677 WTAPQ15007 396 aa16.51■□□□□ 0.23
SMARCA4-214ENST00000589677 STXBP4Q6ZWJ1 553 aa16.51■□□□□ 0.23
SMARCA4-214ENST00000589677 ZBTB16Q05516 673 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 CACNA2D3Q8IZS8 1091 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 MRFAP1L1Q96HT8 127 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 MED4Q9NPJ6 270 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 STX17P56962 302 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 ZBTB9Q96C00 473 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 C14orf93Q9H972 538 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 SLC5A1P13866 664 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 RPS6KB1P23443 525 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 ALDH3A1P30838 453 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 RTN1Q16799 776 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 CROCCP2Q86T23 111 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 KCNH5Q8NCM2 988 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 CCDC26Q8TAB7 109 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 LRRC45Q96CN5 670 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 ANTXR1Q9H6X2 564 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 SNX14Q9Y5W7 946 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 SOS1Q07889 1333 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 ATP5DP30049 168 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 TSNAXIP1Q2TAA8 658 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 INTS8Q75QN2 995 aaKnown RBP16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 UBLCP1Q8WVY7 318 aaPredicted RBP16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 KIAA0556O60303 1618 aa16.5■□□□□ 0.23
SMARCA4-214ENST00000589677 PRC1O43663 620 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 NEBLO76041 1014 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 SEPT6Q14141 434 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 CCDC85AQ96PX6 553 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 FEZ2Q9UHY8 353 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 PPFIA4O75335 1185 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 HPDP32754 393 aaPredicted RBP16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 WHAMMP3Q1A5X7 153 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 PPP1R14CQ8TAE6 165 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 TESK2Q96S53 571 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 ETF1P62495 437 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 MLKLQ8NB16 471 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 FAM71BQ8TC56 605 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 IQCGQ9H095 443 aaKnown RBP16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 TLDC2A0PJX2 215 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 KRT13P13646 458 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 APOBRQ0VD83 1088 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 LRRC8AQ8IWT6 810 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 KIAA1524Q8TCG1 905 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 VCXQ9H320 206 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 NPC1L1Q9UHC9 1359 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 CAPN7Q9Y6W3 813 aa16.49■□□□□ 0.23
SMARCA4-214ENST00000589677 VIMP08670 466 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-214ENST00000589677 RRP15Q9Y3B9 282 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-214ENST00000589677 SETSIPP0DME0 302 aa16.48■□□□□ 0.23
SMARCA4-214ENST00000589677 LRCH2Q5VUJ6 765 aa16.48■□□□□ 0.23
SMARCA4-214ENST00000589677 PSDA5PKW4 1024 aaPredicted RBP16.48■□□□□ 0.23
SMARCA4-214ENST00000589677 STMN2Q93045 179 aa16.48■□□□□ 0.23
SMARCA4-214ENST00000589677 TCOF1Q13428 1488 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-214ENST00000589677 EIF2AK4Q9P2K8 1649 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-214ENST00000589677 ATP2A1O14983 1001 aa16.48■□□□□ 0.23
SMARCA4-214ENST00000589677 IDI1Q13907 227 aa16.48■□□□□ 0.23
SMARCA4-214ENST00000589677 TNIP1Q15025 636 aa16.48■□□□□ 0.23
SMARCA4-214ENST00000589677 DUOX2Q9NRD8 1548 aa16.47■□□□□ 0.23
SMARCA4-214ENST00000589677 ARHGEF12Q9NZN5 1544 aa16.47■□□□□ 0.23
SMARCA4-214ENST00000589677 CAVIN4Q5BKX8 364 aa16.47■□□□□ 0.23
SMARCA4-214ENST00000589677 ZNF444Q8N0Y2 327 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-214ENST00000589677 SLC8A1P32418 973 aa16.47■□□□□ 0.23
SMARCA4-214ENST00000589677 CEP85LQ5SZL2 805 aa16.47■□□□□ 0.23
SMARCA4-214ENST00000589677 IQUBQ8NA54 791 aa16.47■□□□□ 0.23
SMARCA4-214ENST00000589677 CDC25BP30305 580 aa16.47■□□□□ 0.23
SMARCA4-214ENST00000589677 PPP1R2P41236 205 aa16.47■□□□□ 0.23
SMARCA4-214ENST00000589677 EFCAB13Q8IY85 973 aa16.47■□□□□ 0.23
SMARCA4-214ENST00000589677 PYCARDQ9ULZ3 195 aa16.47■□□□□ 0.23
SMARCA4-214ENST00000589677 PAK2Q13177 524 aa16.47■□□□□ 0.23
SMARCA4-214ENST00000589677 GOLGA8KD6RF30 607 aa16.46■□□□□ 0.23
SMARCA4-214ENST00000589677 JAKMIP2Q96AA8 810 aa16.46■□□□□ 0.23
SMARCA4-214ENST00000589677 NKIRAS1Q9NYS0 192 aa16.46■□□□□ 0.23
SMARCA4-214ENST00000589677 ASIC1P78348 528 aa16.46■□□□□ 0.23
SMARCA4-214ENST00000589677 GRIPAP1Q4V328 841 aa16.46■□□□□ 0.23
SMARCA4-214ENST00000589677 ANO1Q5XXA6 986 aa16.46■□□□□ 0.23
SMARCA4-214ENST00000589677 SPTY2D1Q68D10 685 aaPredicted RBP16.46■□□□□ 0.23
SMARCA4-214ENST00000589677 PUS7Q96PZ0 661 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-214ENST00000589677 KCNK9Q9NPC2 374 aa16.46■□□□□ 0.23
SMARCA4-214ENST00000589677 KDM5BQ9UGL1 1544 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms