RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 IL25Q9H293 177 aa16.72■□□□□ 0.27
CDK5RAP3-219ENST00000580670 COL1A1P02452 1464 aaPredicted RBP16.71■□□□□ 0.27
CDK5RAP3-219ENST00000580670 RNF113AO15541 343 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-219ENST00000580670 IDH1O75874 414 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-219ENST00000580670 WASHC4Q2M389 1173 aa16.71■□□□□ 0.27
CDK5RAP3-219ENST00000580670 ZC3H12CQ9C0D7 883 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-219ENST00000580670 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.71■□□□□ 0.271e-7■■■□□ 14.8
CDK5RAP3-219ENST00000580670 CD209Q9NNX6 404 aa16.71■□□□□ 0.27
CDK5RAP3-219ENST00000580670 MYH13Q9UKX3 1938 aa16.7■□□□□ 0.26
CDK5RAP3-219ENST00000580670 A0A0D9SFI3 127 aa16.7■□□□□ 0.26
CDK5RAP3-219ENST00000580670 ZBTB22O15209 634 aa16.7■□□□□ 0.26
CDK5RAP3-219ENST00000580670 CHGBP05060 677 aa16.7■□□□□ 0.26
CDK5RAP3-219ENST00000580670 ZFYP08048 801 aaPredicted RBP16.7■□□□□ 0.26
CDK5RAP3-219ENST00000580670 CHAF1AQ13111 956 aaPredicted RBP16.7■□□□□ 0.26
CDK5RAP3-219ENST00000580670 CCDC93Q567U6 631 aa16.7■□□□□ 0.26
CDK5RAP3-219ENST00000580670 DALRD3Q5D0E6 543 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-219ENST00000580670 TDRD7Q8NHU6 1098 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-219ENST00000580670 WWC3Q9ULE0 1092 aa16.7■□□□□ 0.26
CDK5RAP3-219ENST00000580670 PDS5AQ29RF7 1337 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-219ENST00000580670 GRIPAP1Q4V328 841 aa16.69■□□□□ 0.26
CDK5RAP3-219ENST00000580670 ZSCAN25Q6NSZ9 544 aa16.69■□□□□ 0.26
CDK5RAP3-219ENST00000580670 RTFDC1Q9BY42 306 aaPredicted RBP16.69■□□□□ 0.26
CDK5RAP3-219ENST00000580670 ANO2Q9NQ90 1003 aa16.69■□□□□ 0.26
CDK5RAP3-219ENST00000580670 RAD50Q92878 1312 aa16.69■□□□□ 0.26
CDK5RAP3-219ENST00000580670 SNED1Q8TER0 1413 aa16.69■□□□□ 0.26
CDK5RAP3-219ENST00000580670 IL1R1P14778 569 aa16.69■□□□□ 0.26
CDK5RAP3-219ENST00000580670 MAP3K12Q12852 859 aa16.69■□□□□ 0.26
CDK5RAP3-219ENST00000580670 SLFNL1Q499Z3 407 aa16.69■□□□□ 0.26
CDK5RAP3-219ENST00000580670 C22orf23Q9BZE7 217 aa16.69■□□□□ 0.26
CDK5RAP3-219ENST00000580670 LRP2BPQ9P2M1 347 aa16.69■□□□□ 0.26
CDK5RAP3-219ENST00000580670 MYO5AQ9Y4I1 1855 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP3-219ENST00000580670 MYH7P12883 1935 aa16.68■□□□□ 0.26
CDK5RAP3-219ENST00000580670 ANP32AP39687 249 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-219ENST00000580670 ZMYM1Q5SVZ6 1142 aa16.68■□□□□ 0.26
CDK5RAP3-219ENST00000580670 SLC9C2Q5TAH2 1124 aa16.68■□□□□ 0.26
CDK5RAP3-219ENST00000580670 RTKN2Q8IZC4 609 aa16.68■□□□□ 0.26
CDK5RAP3-219ENST00000580670 SUPT20HQ8NEM7 779 aa16.68■□□□□ 0.26
CDK5RAP3-219ENST00000580670 TBC1D32Q96NH3 1257 aa16.68■□□□□ 0.26
CDK5RAP3-219ENST00000580670 COA1Q9GZY4 146 aa16.68■□□□□ 0.26
CDK5RAP3-219ENST00000580670 ABCF2Q9UG63 623 aa16.68■□□□□ 0.26
CDK5RAP3-219ENST00000580670 JAG2Q9Y219 1238 aa16.68■□□□□ 0.26
CDK5RAP3-219ENST00000580670 DOCK2Q92608 1830 aa16.68■□□□□ 0.26
CDK5RAP3-219ENST00000580670 BRCA1P38398 1863 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-219ENST00000580670 G3V3G9 751 aa16.67■□□□□ 0.26
CDK5RAP3-219ENST00000580670 ADD2P35612 726 aa16.67■□□□□ 0.26
CDK5RAP3-219ENST00000580670 MCMDC2Q4G0Z9 681 aa16.67■□□□□ 0.26
CDK5RAP3-219ENST00000580670 DCAF8Q5TAQ9 597 aa16.67■□□□□ 0.26
CDK5RAP3-219ENST00000580670 SOGA3Q5TF21 947 aa16.67■□□□□ 0.26
CDK5RAP3-219ENST00000580670 KIAA1211Q6ZU35 1233 aa16.67■□□□□ 0.26
CDK5RAP3-219ENST00000580670 SEC62Q99442 399 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-219ENST00000580670 USP26Q9BXU7 913 aa16.67■□□□□ 0.26
CDK5RAP3-219ENST00000580670 HELLSQ9NRZ9 838 aa16.67■□□□□ 0.26
CDK5RAP3-219ENST00000580670 PDE6AP16499 860 aa16.66■□□□□ 0.26
CDK5RAP3-219ENST00000580670 NLGN2Q8NFZ4 835 aa16.66■□□□□ 0.26
CDK5RAP3-219ENST00000580670 WDR66Q8TBY9 1149 aa16.66■□□□□ 0.26
CDK5RAP3-219ENST00000580670 UBE3CQ15386 1083 aa16.66■□□□□ 0.26
CDK5RAP3-219ENST00000580670 DOK7Q18PE1 504 aa16.66■□□□□ 0.26
CDK5RAP3-219ENST00000580670 ZNF589Q86UQ0 364 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-219ENST00000580670 MAGEB6Q8N7X4 407 aa16.66■□□□□ 0.26
CDK5RAP3-219ENST00000580670 APPBP2Q92624 585 aa16.66■□□□□ 0.26
CDK5RAP3-219ENST00000580670 RAI14Q9P0K7 980 aa16.66■□□□□ 0.26
CDK5RAP3-219ENST00000580670 ZNF532Q9HCE3 1301 aa16.65■□□□□ 0.26
CDK5RAP3-219ENST00000580670 CCDC129Q6ZRS4 1044 aa16.65■□□□□ 0.26
CDK5RAP3-219ENST00000580670 OSBP2Q969R2 916 aa16.65■□□□□ 0.26
CDK5RAP3-219ENST00000580670 PSMD1Q99460 953 aa16.65■□□□□ 0.26
CDK5RAP3-219ENST00000580670 BCS1LQ9Y276 419 aa16.65■□□□□ 0.26
CDK5RAP3-219ENST00000580670 MAST3O60307 1309 aa16.64■□□□□ 0.26
CDK5RAP3-219ENST00000580670 SALL1Q9NSC2 1324 aa16.64■□□□□ 0.26
CDK5RAP3-219ENST00000580670 M0R2C6 588 aa16.64■□□□□ 0.25
CDK5RAP3-219ENST00000580670 AOC3Q16853 763 aa16.64■□□□□ 0.25
CDK5RAP3-219ENST00000580670 ZGPATQ8N5A5 531 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-219ENST00000580670 LSG1Q9H089 658 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-219ENST00000580670 CCDC171Q6TFL3 1326 aa16.64■□□□□ 0.25
CDK5RAP3-219ENST00000580670 TCRBV5S4A2TA0A5A2 114 aa16.64■□□□□ 0.25
CDK5RAP3-219ENST00000580670 RBM25P49756 843 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-219ENST00000580670 KIAA2012Q0VF49 1180 aa16.64■□□□□ 0.25
CDK5RAP3-219ENST00000580670 SPTY2D1Q68D10 685 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-219ENST00000580670 FHDC1Q9C0D6 1143 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-219ENST00000580670 DBNDD1Q9H9R9 158 aa16.64■□□□□ 0.25
CDK5RAP3-219ENST00000580670 PPIP5K2O43314 1243 aa16.63■□□□□ 0.25
CDK5RAP3-219ENST00000580670 EPB41L2O43491 1005 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-219ENST00000580670 PTH1RQ03431 593 aa16.63■□□□□ 0.25
CDK5RAP3-219ENST00000580670 PUS7LQ9H0K6 701 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-219ENST00000580670 CHD4Q14839 1912 aa16.63■□□□□ 0.25
CDK5RAP3-219ENST00000580670 FAM205AQ6ZU69 1335 aa16.62■□□□□ 0.25
CDK5RAP3-219ENST00000580670 PRDX5P30044 214 aa16.62■□□□□ 0.25
CDK5RAP3-219ENST00000580670 GTF2IP78347 998 aa16.62■□□□□ 0.25
CDK5RAP3-219ENST00000580670 PODNQ7Z5L7 613 aa16.62■□□□□ 0.25
CDK5RAP3-219ENST00000580670 FBXW7Q969H0 707 aa16.62■□□□□ 0.25
CDK5RAP3-219ENST00000580670 ECE2O60344 883 aa16.61■□□□□ 0.25
CDK5RAP3-219ENST00000580670 LDHBP07195 334 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-219ENST00000580670 CYP7A1P22680 504 aa16.61■□□□□ 0.25
CDK5RAP3-219ENST00000580670 NAA16Q6N069 864 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-219ENST00000580670 TBC1D22AQ8WUA7 517 aa16.61■□□□□ 0.25
CDK5RAP3-219ENST00000580670 MCCP23508 829 aa16.61■□□□□ 0.25
CDK5RAP3-219ENST00000580670 MECOMQ03112 1051 aa16.61■□□□□ 0.25
CDK5RAP3-219ENST00000580670 MFSD14BQ5SR56 506 aa16.61■□□□□ 0.25
CDK5RAP3-219ENST00000580670 TTLL5Q6EMB2 1281 aa16.61■□□□□ 0.25
CDK5RAP3-219ENST00000580670 NSUN4Q96CB9 384 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-219ENST00000580670 ZNF277Q9NRM2 450 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms