RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 AKAP12Q02952 1782 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 UBR1Q8IWV7 1749 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 PRAMEF22A3QJZ6 481 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 PTMAP06454 111 aaKnown RBP6.42□□□□□ -1.38
VAPA-203ENST00000577539 MYL6BP14649 208 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 FAM200AQ8TCP9 573 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 ANKRD24Q8TF21 1146 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 GPATCH3Q96I76 525 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 RNF19AQ9NV58 838 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 STAP2Q9UGK3 403 aa6.42□□□□□ -1.38
VAPA-203ENST00000577539 DIP2AQ14689 1571 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 LZTS3O60299 673 aaPredicted RBP6.41□□□□□ -1.38
VAPA-203ENST00000577539 CYP2E1P05181 493 aaPredicted RBP6.41□□□□□ -1.38
VAPA-203ENST00000577539 ANAPC15P60006 121 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 SLC39A6Q13433 755 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 PROSER3Q2NL68 480 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 AKAP4Q5JQC9 854 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 BEND3Q5T5X7 828 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 POTEAQ6S8J7 498 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 AACSQ86V21 672 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 GPT2Q8TD30 523 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 RBSNQ9H1K0 784 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 PRDM16Q9HAZ2 1276 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 BABAM1Q9NWV8 329 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 C21orf2O43822 256 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 ERCC3P19447 782 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 RAD51AP2Q09MP3 1159 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 G3BP1Q13283 466 aaKnown RBP eCLIP6.41□□□□□ -1.38
VAPA-203ENST00000577539 JARID2Q92833 1246 aaPredicted RBP6.41□□□□□ -1.38
VAPA-203ENST00000577539 C1QTNF2Q9BXJ5 285 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 CCDC8Q9H0W5 538 aaPredicted RBP6.41□□□□□ -1.38
VAPA-203ENST00000577539 SEPT3Q9UH03 358 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 NSFL1CQ9UNZ2 370 aaKnown RBP6.41□□□□□ -1.38
VAPA-203ENST00000577539 ERBB4Q15303 1308 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 SALL3Q9BXA9 1300 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 NRKQ7Z2Y5 1582 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 POTEMA6NI47 508 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 RNMTO43148 476 aaKnown RBP6.41□□□□□ -1.38
VAPA-203ENST00000577539 GLRX3O76003 335 aaKnown RBP6.41□□□□□ -1.38
VAPA-203ENST00000577539 Q3C1V9 767 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 CLEC17AQ6ZS10 378 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 RUFY2Q8WXA3 655 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 RAPGEF4Q8WZA2 1011 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 TMEM63CQ9P1W3 806 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 SMC3Q9UQE7 1217 aa6.41□□□□□ -1.38
VAPA-203ENST00000577539 SGSM2O43147 1006 aa6.4□□□□□ -1.38
VAPA-203ENST00000577539 DDX58O95786 925 aaKnown RBP6.4□□□□□ -1.38
VAPA-203ENST00000577539 MBD3O95983 291 aa6.4□□□□□ -1.38
VAPA-203ENST00000577539 CCNYL3P0C7X3 344 aa6.4□□□□□ -1.38
VAPA-203ENST00000577539 CASTP20810 708 aaKnown RBP6.4□□□□□ -1.38
VAPA-203ENST00000577539 PIP4K2AP48426 406 aaPredicted RBP6.4□□□□□ -1.38
VAPA-203ENST00000577539 AMOTQ4VCS5 1084 aa6.4□□□□□ -1.38
VAPA-203ENST00000577539 PRPF40BQ6NWY9 871 aaKnown RBP6.4□□□□□ -1.38
VAPA-203ENST00000577539 JAKMIP1Q96N16 626 aaKnown RBP6.4□□□□□ -1.38
VAPA-203ENST00000577539 PBX2P40425 430 aa6.4□□□□□ -1.38
VAPA-203ENST00000577539 BCAMP50895 628 aa6.4□□□□□ -1.38
VAPA-203ENST00000577539 ADGRD1Q6QNK2 874 aa6.4□□□□□ -1.38
VAPA-203ENST00000577539 RNF135Q8IUD6 432 aa6.4□□□□□ -1.38
VAPA-203ENST00000577539 MPNDQ8N594 471 aa6.4□□□□□ -1.38
VAPA-203ENST00000577539 WDR33Q9C0J8 1336 aaKnown RBP6.4□□□□□ -1.39
VAPA-203ENST00000577539 SFI1A8K8P3 1242 aa6.4□□□□□ -1.39
VAPA-203ENST00000577539 FIBPO43427 364 aa6.4□□□□□ -1.39
VAPA-203ENST00000577539 PRMT3O60678 531 aa6.4□□□□□ -1.39
VAPA-203ENST00000577539 GIGYF1O75420 1035 aaPredicted RBP6.4□□□□□ -1.39
VAPA-203ENST00000577539 HSPA4P34932 840 aa6.4□□□□□ -1.39
VAPA-203ENST00000577539 ZNF445P59923 1031 aa6.4□□□□□ -1.39
VAPA-203ENST00000577539 MTMR3Q13615 1198 aa6.4□□□□□ -1.39
VAPA-203ENST00000577539 KSR2Q6VAB6 950 aa6.4□□□□□ -1.39
VAPA-203ENST00000577539 PI4K2BQ8TCG2 481 aa6.4□□□□□ -1.39
VAPA-203ENST00000577539 SYAP1Q96A49 352 aaPredicted RBP6.4□□□□□ -1.39
VAPA-203ENST00000577539 BOLA2Q9H3K6 86 aa6.4□□□□□ -1.39
VAPA-203ENST00000577539 ECHDC1Q9NTX5 307 aa6.4□□□□□ -1.39
VAPA-203ENST00000577539 HDAC5Q9UQL6 1122 aa6.4□□□□□ -1.39
VAPA-203ENST00000577539 SNX14Q9Y5W7 946 aa6.4□□□□□ -1.39
VAPA-203ENST00000577539 VPS37CA5D8V6 355 aaPredicted RBP6.39□□□□□ -1.39
VAPA-203ENST00000577539 AK2P54819 239 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 NEXNQ0ZGT2 675 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 KRT28Q7Z3Y7 464 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 CCDC83Q8IWF9 413 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 ANKARQ7Z5J8 1434 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 ZKSCAN1P17029 563 aaPredicted RBP6.39□□□□□ -1.39
VAPA-203ENST00000577539 ZNF211Q13398 564 aaPredicted RBP6.39□□□□□ -1.39
VAPA-203ENST00000577539 MAP7D1Q3KQU3 841 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 ZNF295-AS1Q8N0V1 137 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 KLHDC4Q8TBB5 520 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 GPKOWQ92917 476 aaPredicted RBP eCLIP6.39□□□□□ -1.39
VAPA-203ENST00000577539 ZNF594Q96JF6 807 aaPredicted RBP6.39□□□□□ -1.39
VAPA-203ENST00000577539 ASB16Q96NS5 453 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 FSD1Q9BTV5 496 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 CHMP3Q9Y3E7 222 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 RAD50Q92878 1312 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 TMEM229AB2RXF0 380 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 GADD45BO75293 160 aaPredicted RBP6.39□□□□□ -1.39
VAPA-203ENST00000577539 HOXB7P09629 217 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 SCTRP47872 440 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 CUL4AQ13619 759 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 ZSCAN30Q86W11 494 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 INTS4Q96HW7 963 aaKnown RBP6.39□□□□□ -1.39
VAPA-203ENST00000577539 C8orf37Q96NL8 207 aa6.39□□□□□ -1.39
VAPA-203ENST00000577539 UNC93B1Q9H1C4 597 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms