RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 HCLS1P14317 486 aaPredicted RBP8.92□□□□□ -0.98
HERPUD1-217ENST00000569429 FOSL2P15408 326 aa8.92□□□□□ -0.98
HERPUD1-217ENST00000569429 PSMC4P43686 418 aa8.92□□□□□ -0.98
HERPUD1-217ENST00000569429 IREB2P48200 963 aaKnown RBP8.92□□□□□ -0.98
HERPUD1-217ENST00000569429 GTF2A2P52657 109 aa8.92□□□□□ -0.98
HERPUD1-217ENST00000569429 ANKLE1Q8NAG6 615 aa8.92□□□□□ -0.98
HERPUD1-217ENST00000569429 SLAIN1Q8ND83 568 aa8.92□□□□□ -0.98
HERPUD1-217ENST00000569429 CELF1Q92879 486 aaKnown RBP8.92□□□□□ -0.98
HERPUD1-217ENST00000569429 OPTNQ96CV9 577 aa8.92□□□□□ -0.98
HERPUD1-217ENST00000569429 DEFB129Q9H1M3 183 aa8.92□□□□□ -0.98
HERPUD1-217ENST00000569429 PAK6Q9NQU5 681 aaPredicted RBP8.92□□□□□ -0.98
HERPUD1-217ENST00000569429 PPP2R3BQ9Y5P8 575 aa8.92□□□□□ -0.98
HERPUD1-217ENST00000569429 DDX60LQ5H9U9 1706 aaKnown RBP8.91□□□□□ -0.98
HERPUD1-217ENST00000569429 SPTBN4Q9H254 2564 aa8.91□□□□□ -0.98
HERPUD1-217ENST00000569429 ADGRA2Q96PE1 1338 aa8.91□□□□□ -0.98
HERPUD1-217ENST00000569429 CCL15-CCL14A0A0B4J2E2 113 aa8.91□□□□□ -0.98
HERPUD1-217ENST00000569429 USP2O75604 605 aaPredicted RBP8.91□□□□□ -0.98
HERPUD1-217ENST00000569429 CCL15Q16663 113 aa8.91□□□□□ -0.98
HERPUD1-217ENST00000569429 SUPT20HL1Q3ZLR7 823 aa8.91□□□□□ -0.98
HERPUD1-217ENST00000569429 C17orf99Q6UX52 265 aa8.91□□□□□ -0.98
HERPUD1-217ENST00000569429 PPP4R3CPQ6ZMV5 832 aa8.91□□□□□ -0.98
HERPUD1-217ENST00000569429 PODNQ7Z5L7 613 aa8.91□□□□□ -0.98
HERPUD1-217ENST00000569429 DIS3LQ8TF46 1054 aaKnown RBP8.91□□□□□ -0.98
HERPUD1-217ENST00000569429 ATXN2LQ8WWM7 1075 aaKnown RBP8.91□□□□□ -0.98
HERPUD1-217ENST00000569429 ZBED3Q96IU2 234 aaPredicted RBP8.91□□□□□ -0.98
HERPUD1-217ENST00000569429 DEFB118Q96PH6 123 aa8.91□□□□□ -0.98
HERPUD1-217ENST00000569429 MYO3BQ8WXR4 1341 aa8.9□□□□□ -0.98
HERPUD1-217ENST00000569429 SASH1O94885 1247 aa8.9□□□□□ -0.98
HERPUD1-217ENST00000569429 ADAMTS19Q8TE59 1207 aa8.9□□□□□ -0.98
HERPUD1-217ENST00000569429 UHRF1Q96T88 793 aaPredicted RBP8.9□□□□□ -0.98
HERPUD1-217ENST00000569429 LRFN3Q9BTN0 628 aa8.9□□□□□ -0.98
HERPUD1-217ENST00000569429 CFAP54Q96N23 3096 aa8.9□□□□□ -0.99
HERPUD1-217ENST00000569429 SH3TC1Q8TE82 1336 aa8.89□□□□□ -0.99
HERPUD1-217ENST00000569429 UFL1O94874 794 aa8.89□□□□□ -0.99
HERPUD1-217ENST00000569429 FMNL1O95466 1100 aaPredicted RBP8.89□□□□□ -0.99
HERPUD1-217ENST00000569429 MORC1Q86VD1 984 aa8.89□□□□□ -0.99
HERPUD1-217ENST00000569429 USP38Q8NB14 1042 aa8.89□□□□□ -0.99
HERPUD1-217ENST00000569429 TTYH1Q9H313 450 aaPredicted RBP8.89□□□□□ -0.99
HERPUD1-217ENST00000569429 ELP3Q9H9T3 547 aa8.89□□□□□ -0.99
HERPUD1-217ENST00000569429 WDFY4Q6ZS81 3184 aa8.89□□□□□ -0.99
HERPUD1-217ENST00000569429 PRKCZQ05513 592 aa8.88□□□□□ -0.99
HERPUD1-217ENST00000569429 SF3B3Q15393 1217 aaKnown RBP8.88□□□□□ -0.99
HERPUD1-217ENST00000569429 DACT2Q5SW24 774 aa8.88□□□□□ -0.99
HERPUD1-217ENST00000569429 ASB2Q96Q27 587 aa8.88□□□□□ -0.99
HERPUD1-217ENST00000569429 NBPF3Q9H094 633 aa8.88□□□□□ -0.99
HERPUD1-217ENST00000569429 GGA1Q9UJY5 639 aa8.88□□□□□ -0.99
HERPUD1-217ENST00000569429 RRP7AQ9Y3A4 280 aaKnown RBP8.88□□□□□ -0.99
HERPUD1-217ENST00000569429 ZNF804BA4D1E1 1349 aa8.87□□□□□ -0.99
HERPUD1-217ENST00000569429 XIRP2A4UGR9 3374 aa8.87□□□□□ -0.99
HERPUD1-217ENST00000569429 ADCY3O60266 1144 aa8.87□□□□□ -0.99
HERPUD1-217ENST00000569429 INHAP05111 366 aa8.87□□□□□ -0.99
HERPUD1-217ENST00000569429 MRE11P49959 708 aa8.87□□□□□ -0.99
HERPUD1-217ENST00000569429 RPS8P62241 208 aaKnown RBP8.87□□□□□ -0.99
HERPUD1-217ENST00000569429 MDM2Q00987 491 aaPredicted RBP8.87□□□□□ -0.99
HERPUD1-217ENST00000569429 NBPF12Q5TAG4 269 aaPredicted RBP8.87□□□□□ -0.99
HERPUD1-217ENST00000569429 NLRP10Q86W26 655 aa8.87□□□□□ -0.99
HERPUD1-217ENST00000569429 PXYLP1Q8TE99 480 aa8.87□□□□□ -0.99
HERPUD1-217ENST00000569429 PTPRZ1P23471 2315 aaPredicted RBP8.87□□□□□ -0.99
HERPUD1-217ENST00000569429 COL3A1P02461 1466 aaPredicted RBP8.86□□□□□ -0.99
HERPUD1-217ENST00000569429 BTBD19C9JJ37 291 aa8.86□□□□□ -0.99
HERPUD1-217ENST00000569429 CETPP11597 493 aa8.86□□□□□ -0.99
HERPUD1-217ENST00000569429 MYL6BP14649 208 aa8.86□□□□□ -0.99
HERPUD1-217ENST00000569429 HSP90AB3PQ58FF7 597 aa8.86□□□□□ -0.99
HERPUD1-217ENST00000569429 STRIP1Q5VSL9 837 aa8.86□□□□□ -0.99
HERPUD1-217ENST00000569429 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.86□□□□□ -0.99
HERPUD1-217ENST00000569429 MTMR14Q8NCE2 650 aa8.86□□□□□ -0.99
HERPUD1-217ENST00000569429 MXD3Q9BW11 206 aa8.86□□□□□ -0.99
HERPUD1-217ENST00000569429 C11orf49Q9H6J7 331 aa8.86□□□□□ -0.99
HERPUD1-217ENST00000569429 ANKIB1Q9P2G1 1089 aa8.86□□□□□ -0.99
HERPUD1-217ENST00000569429 TRMT112Q9UI30 125 aaKnown RBP8.86□□□□□ -0.99
HERPUD1-217ENST00000569429 CPA4Q9UI42 421 aa8.86□□□□□ -0.99
HERPUD1-217ENST00000569429 USP34Q70CQ2 3546 aa8.86□□□□□ -0.99
HERPUD1-217ENST00000569429 LTBP2Q14767 1821 aa8.85□□□□□ -0.99
HERPUD1-217ENST00000569429 DIAPH1O60610 1272 aaKnown RBP8.85□□□□□ -0.99
HERPUD1-217ENST00000569429 FCGRTP55899 365 aa8.85□□□□□ -0.99
HERPUD1-217ENST00000569429 SMAD3P84022 425 aaKnown RBP8.85□□□□□ -0.99
HERPUD1-217ENST00000569429 IRF5Q13568 498 aa8.85□□□□□ -0.99
HERPUD1-217ENST00000569429 THEGQ9P2T0 379 aa8.85□□□□□ -0.99
HERPUD1-217ENST00000569429 GABRQQ9UN88 632 aa8.85□□□□□ -0.99
HERPUD1-217ENST00000569429 REV3LO60673 3130 aa8.85□□□□□ -0.99
HERPUD1-217ENST00000569429 PKD1L2Q7Z442 2459 aa8.85□□□□□ -0.99
HERPUD1-217ENST00000569429 AK9Q5TCS8 1911 aa8.84□□□□□ -0.99
HERPUD1-217ENST00000569429 MRPS5P82675 430 aaKnown RBP8.84□□□□□ -0.99
HERPUD1-217ENST00000569429 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.84□□□□□ -0.992e-6■■■■□ 23.5
HERPUD1-217ENST00000569429 PFASO15067 1338 aa8.83□□□□□ -1
HERPUD1-217ENST00000569429 SPDYE5A6NIY4 337 aa8.83□□□□□ -1
HERPUD1-217ENST00000569429 ELNP15502 786 aa8.83□□□□□ -1
HERPUD1-217ENST00000569429 ATP2B4P23634 1241 aa8.83□□□□□ -1
HERPUD1-217ENST00000569429 FLT3LGP49771 235 aa8.83□□□□□ -1
HERPUD1-217ENST00000569429 MAP3K9P80192 1104 aa8.83□□□□□ -1
HERPUD1-217ENST00000569429 VGLL4Q14135 290 aa8.83□□□□□ -1
HERPUD1-217ENST00000569429 TMEM31Q5JXX7 168 aa8.83□□□□□ -1
HERPUD1-217ENST00000569429 LRP10Q7Z4F1 713 aa8.83□□□□□ -1
HERPUD1-217ENST00000569429 KIAA0825Q8IV33 1275 aa8.83□□□□□ -1
HERPUD1-217ENST00000569429 LBHD1Q9BQE6 289 aaPredicted RBP8.83□□□□□ -1
HERPUD1-217ENST00000569429 ZNF318Q5VUA4 2279 aa8.82□□□□□ -1
HERPUD1-217ENST00000569429 MAST2Q6P0Q8 1798 aa8.82□□□□□ -1
HERPUD1-217ENST00000569429 GPR37L1O60883 481 aa8.82□□□□□ -1
HERPUD1-217ENST00000569429 BCRP11274 1271 aa8.82□□□□□ -1
HERPUD1-217ENST00000569429 FOXK2Q01167 660 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms