RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ECM29Q5VYK3 1845 aa23.43■■□□□ 1.34
LINC01238-205ENST00000567549 PPP1R12BO60237 982 aaPredicted RBP23.42■■□□□ 1.34
LINC01238-205ENST00000567549 PLIN1O60240 522 aa23.42■■□□□ 1.34
LINC01238-205ENST00000567549 ZNF521Q96K83 1311 aa23.41■■□□□ 1.34
LINC01238-205ENST00000567549 UNCXA6NJT0 531 aa23.41■■□□□ 1.34
LINC01238-205ENST00000567549 UBE2Q2LH0YL09 131 aa23.41■■□□□ 1.34
LINC01238-205ENST00000567549 TNFAIP1Q13829 316 aa23.41■■□□□ 1.34
LINC01238-205ENST00000567549 SUPT20HL1Q3ZLR7 823 aa23.41■■□□□ 1.34
LINC01238-205ENST00000567549 UTYO14607 1347 aa23.4■■□□□ 1.34
LINC01238-205ENST00000567549 VPS37DQ86XT2 251 aa23.4■■□□□ 1.34
LINC01238-205ENST00000567549 ZBED3Q96IU2 234 aaPredicted RBP23.4■■□□□ 1.34
LINC01238-205ENST00000567549 IRS2Q9Y4H2 1338 aa23.39■■□□□ 1.34
LINC01238-205ENST00000567549 HIBADHP31937 336 aaKnown RBP23.39■■□□□ 1.33
LINC01238-205ENST00000567549 RBM5P52756 815 aaKnown RBP eCLIP23.39■■□□□ 1.33
LINC01238-205ENST00000567549 EPHA10Q5JZY3 1008 aa23.39■■□□□ 1.33
LINC01238-205ENST00000567549 ZNF594Q96JF6 807 aaPredicted RBP23.39■■□□□ 1.33
LINC01238-205ENST00000567549 DEFB129Q9H1M3 183 aa23.39■■□□□ 1.33
LINC01238-205ENST00000567549 FAM205AQ6ZU69 1335 aa23.38■■□□□ 1.33
LINC01238-205ENST00000567549 CFAP100Q494V2 611 aa23.38■■□□□ 1.33
LINC01238-205ENST00000567549 CAVIN4Q5BKX8 364 aa23.38■■□□□ 1.33
LINC01238-205ENST00000567549 PRAMEF18Q5VWM3 479 aa23.38■■□□□ 1.33
LINC01238-205ENST00000567549 HDAC5Q9UQL6 1122 aa23.38■■□□□ 1.33
LINC01238-205ENST00000567549 SPDYE2BA6NHP3 402 aa23.37■■□□□ 1.33
LINC01238-205ENST00000567549 ALDH1A1P00352 501 aa23.37■■□□□ 1.33
LINC01238-205ENST00000567549 SPDYE6P0CI01 402 aa23.37■■□□□ 1.33
LINC01238-205ENST00000567549 INHBEP58166 350 aa23.37■■□□□ 1.33
LINC01238-205ENST00000567549 MLLT1Q03111 559 aaPredicted RBP23.37■■□□□ 1.33
LINC01238-205ENST00000567549 ALDH1L2Q3SY69 923 aa23.37■■□□□ 1.33
LINC01238-205ENST00000567549 SUCLG2Q96I99 432 aa23.37■■□□□ 1.33
LINC01238-205ENST00000567549 F8W031 263 aaPredicted RBP23.36■■□□□ 1.33
LINC01238-205ENST00000567549 FRAT2O75474 233 aaPredicted RBP23.36■■□□□ 1.33
LINC01238-205ENST00000567549 TM4SF4P48230 202 aa23.36■■□□□ 1.33
LINC01238-205ENST00000567549 PKN2Q16513 984 aaKnown RBP23.36■■□□□ 1.33
LINC01238-205ENST00000567549 MFSD14BQ5SR56 506 aa23.36■■□□□ 1.33
LINC01238-205ENST00000567549 CERS5Q8N5B7 392 aa23.36■■□□□ 1.33
LINC01238-205ENST00000567549 MRPL50Q8N5N7 158 aaKnown RBP23.36■■□□□ 1.33
LINC01238-205ENST00000567549 TBC1D22AQ8WUA7 517 aa23.36■■□□□ 1.33
LINC01238-205ENST00000567549 SERPINA10Q9UK55 444 aa23.36■■□□□ 1.33
LINC01238-205ENST00000567549 ANGEL1Q9UNK9 670 aaKnown RBP23.36■■□□□ 1.33
LINC01238-205ENST00000567549 SCAF8Q9UPN6 1271 aaKnown RBP23.36■■□□□ 1.33
LINC01238-205ENST00000567549 SNAP23O00161 211 aa23.35■■□□□ 1.33
LINC01238-205ENST00000567549 CT47B1P0C2W7 299 aaPredicted RBP23.35■■□□□ 1.33
LINC01238-205ENST00000567549 NBPF7P0C2Y1 421 aaPredicted RBP23.35■■□□□ 1.33
LINC01238-205ENST00000567549 RABL6Q3YEC7 729 aaPredicted RBP23.35■■□□□ 1.33
LINC01238-205ENST00000567549 NOM1Q5C9Z4 860 aaKnown RBP23.35■■□□□ 1.33
LINC01238-205ENST00000567549 MOB2Q70IA6 237 aa23.35■■□□□ 1.33
LINC01238-205ENST00000567549 CTU1Q7Z7A3 348 aaKnown RBP23.35■■□□□ 1.33
LINC01238-205ENST00000567549 TDRD7Q8NHU6 1098 aaKnown RBP23.35■■□□□ 1.33
LINC01238-205ENST00000567549 BICC1Q9H694 974 aaKnown RBP23.35■■□□□ 1.33
LINC01238-205ENST00000567549 IREB2P48200 963 aaKnown RBP23.34■■□□□ 1.33
LINC01238-205ENST00000567549 RGS19P49795 217 aa23.34■■□□□ 1.33
LINC01238-205ENST00000567549 METTL24Q5JXM2 366 aa23.34■■□□□ 1.33
LINC01238-205ENST00000567549 SLC10A4Q96EP9 437 aa23.34■■□□□ 1.33
LINC01238-205ENST00000567549 VEZTQ9HBM0 779 aa23.34■■□□□ 1.33
LINC01238-205ENST00000567549 MANSC4A6NHS7 340 aaPredicted RBP23.33■■□□□ 1.33
LINC01238-205ENST00000567549 ZBTB48P10074 688 aaPredicted RBP23.33■■□□□ 1.33
LINC01238-205ENST00000567549 TNNI2P48788 182 aa23.33■■□□□ 1.33
LINC01238-205ENST00000567549 PRKG1Q13976 671 aa23.33■■□□□ 1.33
LINC01238-205ENST00000567549 MAP3K11Q16584 847 aa23.33■■□□□ 1.33
LINC01238-205ENST00000567549 LDLRAD1Q5T700 205 aa23.33■■□□□ 1.33
LINC01238-205ENST00000567549 TTF2Q9UNY4 1162 aaKnown RBP23.33■■□□□ 1.33
LINC01238-205ENST00000567549 RIPOR2Q9Y4F9 1068 aa23.33■■□□□ 1.33
LINC01238-205ENST00000567549 PTPN12Q05209 780 aaKnown RBP23.32■■□□□ 1.32
LINC01238-205ENST00000567549 ARAP2Q8WZ64 1704 aa23.32■■□□□ 1.32
LINC01238-205ENST00000567549 IFIT1P09914 478 aaKnown RBP23.31■■□□□ 1.32
LINC01238-205ENST00000567549 GYG1P46976 350 aa23.31■■□□□ 1.32
LINC01238-205ENST00000567549 SLFN5Q08AF3 891 aa23.31■■□□□ 1.32
LINC01238-205ENST00000567549 SPRYD7Q5W111 196 aa23.31■■□□□ 1.32
LINC01238-205ENST00000567549 OTUD7BQ6GQQ9 843 aa23.31■■□□□ 1.32
LINC01238-205ENST00000567549 FAM84BQ96KN1 310 aaPredicted RBP23.31■■□□□ 1.32
LINC01238-205ENST00000567549 SMC4Q9NTJ3 1288 aa23.31■■□□□ 1.32
LINC01238-205ENST00000567549 MAST3O60307 1309 aa23.31■■□□□ 1.32
LINC01238-205ENST00000567549 KIF16BQ96L93 1317 aa23.31■■□□□ 1.32
LINC01238-205ENST00000567549 CLRN2A0PK11 232 aa23.3■■□□□ 1.32
LINC01238-205ENST00000567549 PDE8BO95263 885 aa23.3■■□□□ 1.32
LINC01238-205ENST00000567549 SSH1Q8WYL5 1049 aa23.3■■□□□ 1.32
LINC01238-205ENST00000567549 PRMT6Q96LA8 375 aaPredicted RBP23.3■■□□□ 1.32
LINC01238-205ENST00000567549 CFHR5Q9BXR6 569 aa23.3■■□□□ 1.32
LINC01238-205ENST00000567549 HDLBPQ00341 1268 aaKnown RBP23.29■■□□□ 1.32
LINC01238-205ENST00000567549 HOOK2Q96ED9 719 aa23.29■■□□□ 1.32
LINC01238-205ENST00000567549 KAZALD1Q96I82 304 aa23.29■■□□□ 1.32
LINC01238-205ENST00000567549 PUS3Q9BZE2 481 aaKnown RBP23.29■■□□□ 1.32
LINC01238-205ENST00000567549 SUGT1Q9Y2Z0 365 aa23.29■■□□□ 1.32
LINC01238-205ENST00000567549 PUM3Q15397 648 aaKnown RBP23.28■■□□□ 1.32
LINC01238-205ENST00000567549 SPDYE2Q495Y8 402 aa23.28■■□□□ 1.32
LINC01238-205ENST00000567549 ANKRD13AQ8IZ07 590 aa23.28■■□□□ 1.32
LINC01238-205ENST00000567549 TMOD2Q9NZR1 351 aa23.28■■□□□ 1.32
LINC01238-205ENST00000567549 JAG2Q9Y219 1238 aa23.28■■□□□ 1.32
LINC01238-205ENST00000567549 MKRN3Q13064 507 aaKnown RBP23.27■■□□□ 1.32
LINC01238-205ENST00000567549 RASA3Q14644 834 aa23.27■■□□□ 1.32
LINC01238-205ENST00000567549 FBXO33Q7Z6M2 555 aa23.27■■□□□ 1.32
LINC01238-205ENST00000567549 ANKRD44Q8N8A2 993 aa23.27■■□□□ 1.32
LINC01238-205ENST00000567549 FBXO3Q9UK99 471 aa23.27■■□□□ 1.32
LINC01238-205ENST00000567549 TBC1D8O95759 1140 aa23.26■■□□□ 1.31
LINC01238-205ENST00000567549 DZIP1LQ8IYY4 767 aaKnown RBP23.26■■□□□ 1.31
LINC01238-205ENST00000567549 ZNF296Q8WUU4 475 aaPredicted RBP23.26■■□□□ 1.31
LINC01238-205ENST00000567549 TEKT1Q969V4 418 aa23.26■■□□□ 1.31
LINC01238-205ENST00000567549 USP44Q9H0E7 712 aa23.26■■□□□ 1.31
LINC01238-205ENST00000567549 ZNF70Q9UC06 446 aaPredicted RBP23.26■■□□□ 1.31
LINC01238-205ENST00000567549 GPR25O00155 361 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms