RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	CCDC6	Q16204	474 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	CCDC129	Q6ZRS4	1044 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	ANKRD44	Q8N8A2	993 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	CFAP57	Q96MR6	1250 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	NAPG	Q99747	312 aa	Predicted RBP	4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	N4BP3	O15049	544 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	CARMIL3	Q8ND23	1372 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	GMNC	A6NCL1	334 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	GRIPAP1	Q4V328	841 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	CCDC110	Q8TBZ0	833 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	RIMS2	Q9UQ26	1411 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	TWISTNB	Q3B726	338 aa	Predicted RBP	4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	CNNM3	Q8NE01	707 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	OR8K1	Q8NGG5	319 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.81	□□□□□ -1.64	2e-6	■■■■■ 51.8
MACF1-231	ENST00000564288	USP16	Q9Y5T5	823 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	PPP4R3A	Q6IN85	833 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	CACTIN	Q8WUQ7	758 aa	Known RBP	4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	ADGB	Q8N7X0	1667 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	ARHGEF11	O15085	1522 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	IQUB	Q8NA54	791 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	RMND1	Q9NWS8	449 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	PRDM15	P57071	1507 aa	Predicted RBP	4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	PDE1A	P54750	535 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	SEPT2	Q15019	361 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	CACNA2D3	Q8IZS8	1091 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	SAMD15	Q9P1V8	674 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	FAM169A	Q9Y6X4	670 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	CREB3	O43889	395 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	SYK	P43405	635 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	IRAK1	P51617	712 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	DNM1	Q05193	864 aa	Known RBP	4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	CCDC92	Q53HC0	331 aa	Predicted RBP	4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	NEK1	Q96PY6	1258 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	FKBP15	Q5T1M5	1219 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	SLC30A9	Q6PML9	568 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	ATP5J	P18859	108 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	IFNK	Q9P0W0	207 aa		4.81	□□□□□ -1.64
MACF1-231	ENST00000564288	ARID3C	A6NKF2	412 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	FAM160A1	Q05DH4	1040 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	SPAG5	Q96R06	1193 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	FBF1	Q8TES7	1133 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	CEP63	Q96MT8	703 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	CNGA4	Q8IV77	575 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	JADE2	Q9NQC1	790 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	CNPY2	Q9Y2B0	182 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	ERICH2	A1L162	156 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	SKI	P12755	728 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	NAA16	Q6N069	864 aa	Predicted RBP	4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	PNMA8A	Q86V59	439 aa	Predicted RBP	4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	EID1	Q9Y6B2	187 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	ADAL	Q6DHV7	355 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	GJB2	P29033	226 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	CEBPZ	Q03701	1054 aa	Known RBP	4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	IFT88	Q13099	833 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	CFAP221	Q4G0U5	840 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	L2HGDH	Q9H9P8	463 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	PHACTR2	O75167	634 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	IRX4	P78413	519 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	CNKSR2	Q8WXI2	1034 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	SGSM2	O43147	1006 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	MSH6	P52701	1360 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	SYNM	O15061	1565 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	PHLPP2	Q6ZVD8	1323 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	SASH1	O94885	1247 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	CCDC174	Q6PII3	467 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	CHML	P26374	656 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	TEX13A	Q9BXU3	409 aa	Predicted RBP	4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	BAIAP2L1	Q9UHR4	511 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	SAR1B	Q9Y6B6	198 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	CFAP73	A6NFT4	308 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	RASSF8	Q8NHQ8	419 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	CMA1	P23946	247 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	RALYL	Q86SE5	291 aa	Known RBP	4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	CALR3	Q96L12	384 aa	Known RBP	4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	WWC3	Q9ULE0	1092 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	USP19	O94966	1318 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	CCDC42	Q96M95	316 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	NSD3	Q9BZ95	1437 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	SAMD9L	Q8IVG5	1584 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	MARCH6	O60337	910 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	IQCA1	Q86XH1	822 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	RBM42	Q9BTD8	480 aa	Known RBP	4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	PLCB1	Q9NQ66	1216 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	TRIM4	Q9C037	500 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	ACTN4	O43707	911 aa	Known RBP	4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	TRIM14	Q14142	442 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	FSIP1	Q8NA03	581 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	SEC62	Q99442	399 aa	Known RBP	4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	GDPD2	Q9HCC8	539 aa		4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	ZFX	P17010	805 aa	Predicted RBP	4.8	□□□□□ -1.64
MACF1-231	ENST00000564288	RIPPLY1	Q0D2K3	151 aa		4.79	□□□□□ -1.64
MACF1-231	ENST00000564288	PPP2R5A	Q15172	486 aa		4.79	□□□□□ -1.64
MACF1-231	ENST00000564288	TTC41P	Q6P2S7	1318 aa		4.79	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms