RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 CCDC25Q86WR0 208 aa11.55□□□□□ -0.56
GTF3C1-202ENST00000561623 CWC25Q9NXE8 425 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-202ENST00000561623 SAMD15Q9P1V8 674 aa11.55□□□□□ -0.56
GTF3C1-202ENST00000561623 WASLO00401 505 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 VAMP4O75379 141 aa11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 KCNH5Q8NCM2 988 aa11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 CEP83Q9Y592 693 aa11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 GJC1P36383 396 aa11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 TUBB4BP68371 445 aa11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 ZBTB16Q05516 673 aa11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 GRIPAP1Q4V328 841 aa11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 ANKRD24Q8TF21 1146 aa11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 NAPGQ99747 312 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 FBXO31Q5XUX0 539 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 TBC1D5Q92609 795 aa11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 LUC7L2Q9Y383 392 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 GOLGA6CA6NDK9 693 aa11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 MYCP01106 439 aaPredicted RBP11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 GOLGA6DP0CG33 693 aa11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 CLNS1AP54105 237 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 CUL5Q93034 780 aa11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 PUS7Q96PZ0 661 aaKnown RBP11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 GOLGA6AQ9NYA3 693 aa11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 FANCCQ00597 558 aa11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 CTNND2Q9UQB3 1225 aa11.54□□□□□ -0.56
GTF3C1-202ENST00000561623 TRIM75PA6NK02 468 aa11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 RNASE9P60153 205 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 SF3A3Q12874 501 aaKnown RBP eCLIP11.53□□□□□ -0.563e-6■■■■■ 29.5
GTF3C1-202ENST00000561623 IFIT1BQ5T764 474 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 IGSF22Q8N9C0 903 aa11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 STMN4Q9H169 189 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 HEATR3Q7Z4Q2 680 aa11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 MSH6P52701 1360 aa11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 CNGA4Q8IV77 575 aa11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 ARFGAP2Q8N6H7 521 aa11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 PPM1EQ8WY54 764 aa11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 IQCGQ9H095 443 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 KRT23Q9C075 422 aa11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 GAS2L3Q86XJ1 694 aa11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 NEK11Q8NG66 645 aa11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 SLC4A4Q9Y6R1 1079 aa11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 PTPRKQ15262 1439 aa11.53□□□□□ -0.56
GTF3C1-202ENST00000561623 ZBTB7BO15156 539 aaPredicted RBP11.52□□□□□ -0.56
GTF3C1-202ENST00000561623 TBCAO75347 108 aaKnown RBP11.52□□□□□ -0.56
GTF3C1-202ENST00000561623 NBPF7P0C2Y1 421 aaPredicted RBP11.52□□□□□ -0.56
GTF3C1-202ENST00000561623 BMP15O95972 392 aa11.52□□□□□ -0.56
GTF3C1-202ENST00000561623 VIMP08670 466 aaKnown RBP11.52□□□□□ -0.56
GTF3C1-202ENST00000561623 PDE4BQ07343 736 aa11.52□□□□□ -0.56
GTF3C1-202ENST00000561623 B4GALNT4Q76KP1 1039 aa11.52□□□□□ -0.56
GTF3C1-202ENST00000561623 PAG1Q9NWQ8 432 aa11.52□□□□□ -0.56
GTF3C1-202ENST00000561623 TTC21BQ7Z4L5 1316 aa11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 HGSO14964 777 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 MCM7P33993 719 aa11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 APBB1IPQ7Z5R6 666 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 VPS16Q9H269 839 aa11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 ELP1O95163 1332 aa11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 TTC41PQ6P2S7 1318 aa11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 GSTA5Q7RTV2 222 aa11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 FERMT2Q96AC1 680 aa11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 GDAP1L1Q96MZ0 367 aa11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 TTC14Q96N46 770 aa11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 SNX14Q9Y5W7 946 aa11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 A0A1B0GUA9 196 aa11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 ZNF500O60304 480 aaPredicted RBP11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 ZSCAN26Q16670 478 aa11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 CCDC77Q9BR77 488 aa11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 LRRC27Q9C0I9 530 aa11.52□□□□□ -0.57
GTF3C1-202ENST00000561623 TOPBP1Q92547 1522 aa11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 BUB1BO60566 1050 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 STX8Q9UNK0 236 aa11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 IQSEC3Q9UPP2 1182 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 DHX32Q7L7V1 743 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 GPIHBP1Q8IV16 184 aa11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 SEC62Q99442 399 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 MRVI1Q9Y6F6 885 aa11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 MAGI1Q96QZ7 1491 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 TUBBP07437 444 aa11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 LACTBP83111 547 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 BRAPQ7Z569 592 aa11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 GRM8O00222 908 aa11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 APBA3O96018 575 aa11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 TNNC1P63316 161 aa11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 ANKRD13DQ6ZTN6 518 aa11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 CD109Q6YHK3 1445 aa11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 DAAM2Q86T65 1068 aa11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 CHAMP1Q96JM3 812 aa11.51□□□□□ -0.57
GTF3C1-202ENST00000561623 CCDC172P0C7W6 258 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 LRMPQ12912 555 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 SLC9C2Q5TAH2 1124 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 ARHGAP27Q6ZUM4 889 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 POTEDQ86YR6 584 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 RPS6KB1P23443 525 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 ERCC6LQ2NKX8 1250 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 UTP14CQ5TAP6 766 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 CDC37L1Q7L3B6 337 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 OGFOD1Q8N543 542 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 XAGE3Q8WTP9 111 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 LEO1Q8WVC0 666 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 SMC6Q96SB8 1091 aa11.5□□□□□ -0.57
GTF3C1-202ENST00000561623 PPP4R3AQ6IN85 833 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms