RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 IDH1O75874 414 aaKnown RBP12.39□□□□□ -0.43
USP3-219ENST00000561326 ZMYM1Q5SVZ6 1142 aa12.39□□□□□ -0.43
USP3-219ENST00000561326 SLC9C2Q5TAH2 1124 aa12.39□□□□□ -0.43
USP3-219ENST00000561326 DCAF8Q5TAQ9 597 aa12.39□□□□□ -0.43
USP3-219ENST00000561326 TMED8Q6PL24 325 aaPredicted RBP12.39□□□□□ -0.43
USP3-219ENST00000561326 PI16Q6UXB8 463 aa12.39□□□□□ -0.43
USP3-219ENST00000561326 ZGPATQ8N5A5 531 aaKnown RBP12.39□□□□□ -0.43
USP3-219ENST00000561326 FAM227BQ96M60 508 aa12.39□□□□□ -0.43
USP3-219ENST00000561326 IQSEC3Q9UPP2 1182 aaPredicted RBP12.39□□□□□ -0.43
USP3-219ENST00000561326 PSDA5PKW4 1024 aaPredicted RBP12.38□□□□□ -0.43
USP3-219ENST00000561326 UBE3CQ15386 1083 aa12.38□□□□□ -0.43
USP3-219ENST00000561326 SUPT20HQ8NEM7 779 aa12.38□□□□□ -0.43
USP3-219ENST00000561326 IL27Q8NEV9 243 aa12.38□□□□□ -0.43
USP3-219ENST00000561326 WDR66Q8TBY9 1149 aa12.38□□□□□ -0.43
USP3-219ENST00000561326 DAXXQ9UER7 740 aaPredicted RBP12.38□□□□□ -0.43
USP3-219ENST00000561326 POLLQ9UGP5 575 aa12.38□□□□□ -0.43
USP3-219ENST00000561326 A0A0D9SFI3 127 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 A0A0G2JLW4 131 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 DPEP1P16444 411 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 ADD2P35612 726 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 ANAPC15P60006 121 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 SOGA3Q5TF21 947 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 ERICH6Q7L0X2 663 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 RTKN2Q8IZC4 609 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 TDRD7Q8NHU6 1098 aaKnown RBP12.37□□□□□ -0.43
USP3-219ENST00000561326 APPBP2Q92624 585 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 COA1Q9GZY4 146 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 PIH1D3Q9NQM4 214 aaKnown RBP12.37□□□□□ -0.43
USP3-219ENST00000561326 RAI14Q9P0K7 980 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 PIM2Q9P1W9 311 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 ABCF2Q9UG63 623 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 CD2APQ9Y5K6 639 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 MED23Q9ULK4 1368 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 LTBP1Q14766 1721 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 IRS2Q9Y4H2 1338 aa12.37□□□□□ -0.43
USP3-219ENST00000561326 IL1R1P14778 569 aa12.36□□□□□ -0.43
USP3-219ENST00000561326 KLRK1P26718 216 aa12.36□□□□□ -0.43
USP3-219ENST00000561326 CHAF1AQ13111 956 aaPredicted RBP12.36□□□□□ -0.43
USP3-219ENST00000561326 BECN1Q14457 450 aa12.36□□□□□ -0.43
USP3-219ENST00000561326 RNF20Q5VTR2 975 aa12.36□□□□□ -0.43
USP3-219ENST00000561326 TXNRD3Q86VQ6 643 aa12.36□□□□□ -0.43
USP3-219ENST00000561326 MAP4K1Q92918 833 aa12.36□□□□□ -0.43
USP3-219ENST00000561326 LSG1Q9H089 658 aaKnown RBP12.36□□□□□ -0.43
USP3-219ENST00000561326 SPON1Q9HCB6 807 aa12.36□□□□□ -0.43
USP3-219ENST00000561326 CD209Q9NNX6 404 aa12.36□□□□□ -0.43
USP3-219ENST00000561326 CCDC171Q6TFL3 1326 aa12.36□□□□□ -0.43
USP3-219ENST00000561326 RIMBP2O15034 1052 aa12.35□□□□□ -0.43
USP3-219ENST00000561326 PDE6AP16499 860 aa12.35□□□□□ -0.43
USP3-219ENST00000561326 ZKSCAN1P17029 563 aaPredicted RBP12.35□□□□□ -0.43
USP3-219ENST00000561326 HSPA4P34932 840 aa12.35□□□□□ -0.43
USP3-219ENST00000561326 MAGEB6Q8N7X4 407 aa12.35□□□□□ -0.43
USP3-219ENST00000561326 TBC1D22AQ8WUA7 517 aa12.35□□□□□ -0.43
USP3-219ENST00000561326 C7orf43Q8WVR3 580 aa12.35□□□□□ -0.43
USP3-219ENST00000561326 IPO9Q96P70 1041 aaKnown RBP12.35□□□□□ -0.43
USP3-219ENST00000561326 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
USP3-219ENST00000561326 PPP1R1BQ9UD71 204 aaPredicted RBP12.35□□□□□ -0.43
USP3-219ENST00000561326 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
USP3-219ENST00000561326 MYH2Q9UKX2 1941 aa12.35□□□□□ -0.43
USP3-219ENST00000561326 KCNA3P22001 575 aa12.34□□□□□ -0.43
USP3-219ENST00000561326 RABEP1Q15276 862 aa12.34□□□□□ -0.43
USP3-219ENST00000561326 CCDC93Q567U6 631 aa12.34□□□□□ -0.43
USP3-219ENST00000561326 DALRD3Q5D0E6 543 aaKnown RBP12.34□□□□□ -0.43
USP3-219ENST00000561326 OSBP2Q969R2 916 aa12.34□□□□□ -0.43
USP3-219ENST00000561326 AIDAQ96BJ3 306 aa12.34□□□□□ -0.43
USP3-219ENST00000561326 SEC62Q99442 399 aaKnown RBP12.34□□□□□ -0.43
USP3-219ENST00000561326 DSCC1Q9BVC3 393 aa12.34□□□□□ -0.43
USP3-219ENST00000561326 RTFDC1Q9BY42 306 aaPredicted RBP12.34□□□□□ -0.43
USP3-219ENST00000561326 VPS33BQ9H267 617 aa12.34□□□□□ -0.43
USP3-219ENST00000561326 IL25Q9H293 177 aa12.34□□□□□ -0.43
USP3-219ENST00000561326 CTNNA3Q9UI47 895 aa12.34□□□□□ -0.43
USP3-219ENST00000561326 ZNF532Q9HCE3 1301 aa12.34□□□□□ -0.43
USP3-219ENST00000561326 SALL1Q9NSC2 1324 aa12.34□□□□□ -0.43
USP3-219ENST00000561326 C21orf2O43822 256 aa12.33□□□□□ -0.44
USP3-219ENST00000561326 LDHBP07195 334 aaKnown RBP12.33□□□□□ -0.44
USP3-219ENST00000561326 LDHCP07864 332 aa12.33□□□□□ -0.44
USP3-219ENST00000561326 GNAT2P19087 354 aa12.33□□□□□ -0.44
USP3-219ENST00000561326 CYP7A1P22680 504 aa12.33□□□□□ -0.44
USP3-219ENST00000561326 GSTO1P78417 241 aa12.33□□□□□ -0.44
USP3-219ENST00000561326 PTH1RQ03431 593 aa12.33□□□□□ -0.44
USP3-219ENST00000561326 NAA16Q6N069 864 aaPredicted RBP12.33□□□□□ -0.44
USP3-219ENST00000561326 OLFM4Q6UX06 510 aa12.33□□□□□ -0.44
USP3-219ENST00000561326 PODNQ7Z5L7 613 aa12.33□□□□□ -0.44
USP3-219ENST00000561326 ZNF589Q86UQ0 364 aaPredicted RBP12.33□□□□□ -0.44
USP3-219ENST00000561326 SLF2Q8IX21 1173 aa12.33□□□□□ -0.44
USP3-219ENST00000561326 KLHL34Q8N239 644 aa12.33□□□□□ -0.44
USP3-219ENST00000561326 GPR101Q96P66 508 aaPredicted RBP12.33□□□□□ -0.44
USP3-219ENST00000561326 SGIP1Q9BQI5 828 aa12.33□□□□□ -0.44
USP3-219ENST00000561326 BRCA1P38398 1863 aaKnown RBP12.33□□□□□ -0.44
USP3-219ENST00000561326 MAST3O60307 1309 aa12.33□□□□□ -0.44
USP3-219ENST00000561326 DUOX1Q9NRD9 1551 aa12.32□□□□□ -0.44
USP3-219ENST00000561326 TCRBV5S4A2TA0A5A2 114 aa12.32□□□□□ -0.44
USP3-219ENST00000561326 PTGER2P43116 358 aa12.32□□□□□ -0.44
USP3-219ENST00000561326 NECTIN1Q15223 517 aa12.32□□□□□ -0.44
USP3-219ENST00000561326 CCDC129Q6ZRS4 1044 aa12.32□□□□□ -0.44
USP3-219ENST00000561326 DZIP1Q86YF9 867 aaKnown RBP12.32□□□□□ -0.44
USP3-219ENST00000561326 NOL10Q9BSC4 688 aaKnown RBP12.32□□□□□ -0.44
USP3-219ENST00000561326 PUS7LQ9H0K6 701 aaKnown RBP12.32□□□□□ -0.44
USP3-219ENST00000561326 WWC3Q9ULE0 1092 aa12.32□□□□□ -0.44
USP3-219ENST00000561326 RBM8AQ9Y5S9 174 aaKnown RBP12.32□□□□□ -0.44
USP3-219ENST00000561326 FAM205AQ6ZU69 1335 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms