RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 IARSP41252 1262 aaKnown RBP16.59■□□□□ 0.25
HMBOX1-213ENST00000560269 DOK7Q18PE1 504 aa16.59■□□□□ 0.25
HMBOX1-213ENST00000560269 PODNQ7Z5L7 613 aa16.59■□□□□ 0.25
HMBOX1-213ENST00000560269 CNTROBQ8N137 903 aa16.59■□□□□ 0.25
HMBOX1-213ENST00000560269 NDUFB9Q9Y6M9 179 aa16.59■□□□□ 0.25
HMBOX1-213ENST00000560269 COL4A5P29400 1685 aa16.59■□□□□ 0.25
HMBOX1-213ENST00000560269 ZNF646O15015 1829 aaPredicted RBP16.59■□□□□ 0.25
HMBOX1-213ENST00000560269 GOLIM4O00461 696 aa16.58■□□□□ 0.24
HMBOX1-213ENST00000560269 ECE2O60344 883 aa16.58■□□□□ 0.24
HMBOX1-213ENST00000560269 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.24
HMBOX1-213ENST00000560269 CYP2E1P05181 493 aaPredicted RBP16.58■□□□□ 0.24
HMBOX1-213ENST00000560269 TTF1Q15361 905 aaPredicted RBP16.58■□□□□ 0.24
HMBOX1-213ENST00000560269 EDC3Q96F86 508 aaKnown RBP16.58■□□□□ 0.24
HMBOX1-213ENST00000560269 FAM205AQ6ZU69 1335 aa16.58■□□□□ 0.24
HMBOX1-213ENST00000560269 PSME4Q14997 1843 aa16.58■□□□□ 0.24
HMBOX1-213ENST00000560269 CCDC88AQ3V6T2 1871 aa16.57■□□□□ 0.24
HMBOX1-213ENST00000560269 SALL1Q9NSC2 1324 aa16.57■□□□□ 0.24
HMBOX1-213ENST00000560269 G3V3G9 751 aa16.57■□□□□ 0.24
HMBOX1-213ENST00000560269 RASSF7Q02833 373 aa16.57■□□□□ 0.24
HMBOX1-213ENST00000560269 DCAF8Q5TAQ9 597 aa16.57■□□□□ 0.24
HMBOX1-213ENST00000560269 ARHGAP27Q6ZUM4 889 aa16.57■□□□□ 0.24
HMBOX1-213ENST00000560269 TICAM2Q86XR7 235 aa16.57■□□□□ 0.24
HMBOX1-213ENST00000560269 LARGE2Q8N3Y3 721 aa16.57■□□□□ 0.24
HMBOX1-213ENST00000560269 RILPL2Q969X0 211 aa16.57■□□□□ 0.24
HMBOX1-213ENST00000560269 ANTXR1Q9H6X2 564 aa16.57■□□□□ 0.24
HMBOX1-213ENST00000560269 DBNDD1Q9H9R9 158 aa16.57■□□□□ 0.24
HMBOX1-213ENST00000560269 SCN9AQ15858 1988 aa16.57■□□□□ 0.24
HMBOX1-213ENST00000560269 DICER1Q9UPY3 1922 aaKnown RBP16.57■□□□□ 0.24
HMBOX1-213ENST00000560269 SBF1O95248 1867 aa16.56■□□□□ 0.24
HMBOX1-213ENST00000560269 MYO5AQ9Y4I1 1855 aaKnown RBP16.56■□□□□ 0.24
HMBOX1-213ENST00000560269 RFX7Q2KHR2 1363 aa16.56■□□□□ 0.24
HMBOX1-213ENST00000560269 KBTBD3Q8NAB2 608 aa16.56■□□□□ 0.24
HMBOX1-213ENST00000560269 WDR66Q8TBY9 1149 aa16.56■□□□□ 0.24
HMBOX1-213ENST00000560269 PIH1D3Q9NQM4 214 aaKnown RBP16.56■□□□□ 0.24
HMBOX1-213ENST00000560269 MYH7P12883 1935 aa16.56■□□□□ 0.24
HMBOX1-213ENST00000560269 IGSF3O75054 1194 aa16.55■□□□□ 0.24
HMBOX1-213ENST00000560269 PRELPP51888 382 aa16.55■□□□□ 0.24
HMBOX1-213ENST00000560269 CHAF1AQ13111 956 aaPredicted RBP16.55■□□□□ 0.24
HMBOX1-213ENST00000560269 PELP1Q8IZL8 1130 aaKnown RBP16.55■□□□□ 0.24
HMBOX1-213ENST00000560269 YDJCA8MPS7 323 aa16.54■□□□□ 0.24
HMBOX1-213ENST00000560269 GTF2IP78347 998 aa16.54■□□□□ 0.24
HMBOX1-213ENST00000560269 TBC1D9Q6ZT07 1266 aa16.54■□□□□ 0.24
HMBOX1-213ENST00000560269 NIM1KQ8IY84 436 aa16.54■□□□□ 0.24
HMBOX1-213ENST00000560269 ZGPATQ8N5A5 531 aaKnown RBP16.54■□□□□ 0.24
HMBOX1-213ENST00000560269 TBC1D22AQ8WUA7 517 aa16.54■□□□□ 0.24
HMBOX1-213ENST00000560269 FSD1Q9BTV5 496 aa16.54■□□□□ 0.24
HMBOX1-213ENST00000560269 ZNRF3Q9ULT6 936 aa16.54■□□□□ 0.24
HMBOX1-213ENST00000560269 MAST2Q6P0Q8 1798 aa16.54■□□□□ 0.24
HMBOX1-213ENST00000560269 CDC45O75419 566 aa16.53■□□□□ 0.24
HMBOX1-213ENST00000560269 LMNB1P20700 586 aa16.53■□□□□ 0.24
HMBOX1-213ENST00000560269 FKBP1AP62942 108 aaKnown RBP16.53■□□□□ 0.24
HMBOX1-213ENST00000560269 GPR162Q16538 588 aa16.53■□□□□ 0.24
HMBOX1-213ENST00000560269 STRIP1Q5VSL9 837 aa16.53■□□□□ 0.24
HMBOX1-213ENST00000560269 TTLL5Q6EMB2 1281 aa16.53■□□□□ 0.24
HMBOX1-213ENST00000560269 JDP2Q8WYK2 163 aa16.53■□□□□ 0.24
HMBOX1-213ENST00000560269 KCNQ5Q9NR82 932 aa16.53■□□□□ 0.24
HMBOX1-213ENST00000560269 USP17L3A6NCW0 530 aa16.52■□□□□ 0.24
HMBOX1-213ENST00000560269 USP17L4A6NCW7 530 aa16.52■□□□□ 0.24
HMBOX1-213ENST00000560269 GRIN3BO60391 1043 aa16.52■□□□□ 0.24
HMBOX1-213ENST00000560269 LRRFIP1Q32MZ4 808 aaKnown RBP16.52■□□□□ 0.24
HMBOX1-213ENST00000560269 SPTY2D1Q68D10 685 aaPredicted RBP16.52■□□□□ 0.24
HMBOX1-213ENST00000560269 USP17L1Q7RTZ2 530 aa16.52■□□□□ 0.24
HMBOX1-213ENST00000560269 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.52■□□□□ 0.24
HMBOX1-213ENST00000560269 JAG2Q9Y219 1238 aa16.52■□□□□ 0.24
HMBOX1-213ENST00000560269 HIP1O00291 1037 aa16.51■□□□□ 0.23
HMBOX1-213ENST00000560269 ZFYP08048 801 aaPredicted RBP16.51■□□□□ 0.23
HMBOX1-213ENST00000560269 CHMLP26374 656 aa16.51■□□□□ 0.23
HMBOX1-213ENST00000560269 MAP3K12Q12852 859 aa16.51■□□□□ 0.23
HMBOX1-213ENST00000560269 DACT2Q5SW24 774 aa16.51■□□□□ 0.23
HMBOX1-213ENST00000560269 ZSCAN25Q6NSZ9 544 aa16.51■□□□□ 0.23
HMBOX1-213ENST00000560269 TMED8Q6PL24 325 aaPredicted RBP16.51■□□□□ 0.23
HMBOX1-213ENST00000560269 LRP2BPQ9P2M1 347 aa16.51■□□□□ 0.23
HMBOX1-213ENST00000560269 ABCF2Q9UG63 623 aa16.51■□□□□ 0.23
HMBOX1-213ENST00000560269 SUGT1Q9Y2Z0 365 aa16.51■□□□□ 0.23
HMBOX1-213ENST00000560269 FZD9O00144 591 aa16.5■□□□□ 0.23
HMBOX1-213ENST00000560269 RNF113AO15541 343 aaKnown RBP16.5■□□□□ 0.23
HMBOX1-213ENST00000560269 IDH1O75874 414 aaKnown RBP16.5■□□□□ 0.23
HMBOX1-213ENST00000560269 PRDX5P30044 214 aa16.5■□□□□ 0.23
HMBOX1-213ENST00000560269 C8orf34Q49A92 452 aa16.5■□□□□ 0.23
HMBOX1-213ENST00000560269 MFSD14BQ5SR56 506 aa16.5■□□□□ 0.23
HMBOX1-213ENST00000560269 ERICH6Q7L0X2 663 aa16.5■□□□□ 0.23
HMBOX1-213ENST00000560269 CERS5Q8N5B7 392 aa16.5■□□□□ 0.23
HMBOX1-213ENST00000560269 TIAM2Q8IVF5 1701 aa16.5■□□□□ 0.23
HMBOX1-213ENST00000560269 LDHBP07195 334 aaKnown RBP16.49■□□□□ 0.23
HMBOX1-213ENST00000560269 VIL1P09327 827 aaKnown RBP16.49■□□□□ 0.23
HMBOX1-213ENST00000560269 PDE6AP16499 860 aa16.49■□□□□ 0.23
HMBOX1-213ENST00000560269 ADD2P35612 726 aa16.49■□□□□ 0.23
HMBOX1-213ENST00000560269 CXCL9Q07325 125 aa16.49■□□□□ 0.23
HMBOX1-213ENST00000560269 UBE3CQ15386 1083 aa16.49■□□□□ 0.23
HMBOX1-213ENST00000560269 SLC9C2Q5TAH2 1124 aa16.49■□□□□ 0.23
HMBOX1-213ENST00000560269 FBXW7Q969H0 707 aa16.49■□□□□ 0.23
HMBOX1-213ENST00000560269 NSUN4Q96CB9 384 aaKnown RBP16.49■□□□□ 0.23
HMBOX1-213ENST00000560269 DIAPH3Q9NSV4 1193 aa16.49■□□□□ 0.23
HMBOX1-213ENST00000560269 RAI14Q9P0K7 980 aa16.49■□□□□ 0.23
HMBOX1-213ENST00000560269 TCRBV5S4A2TA0A5A2 114 aa16.48■□□□□ 0.23
HMBOX1-213ENST00000560269 GRIK5Q16478 980 aa16.48■□□□□ 0.23
HMBOX1-213ENST00000560269 CASC1Q6TDU7 716 aa16.48■□□□□ 0.23
HMBOX1-213ENST00000560269 MYO3BQ8WXR4 1341 aa16.47■□□□□ 0.23
HMBOX1-213ENST00000560269 UTRNP46939 3433 aa16.47■□□□□ 0.23
HMBOX1-213ENST00000560269 PSMD14O00487 310 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms