RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 GOLGA6AQ9NYA3 693 aa15.54■□□□□ 0.08
CSPG4P12-202ENST00000559989 DBN1Q16643 649 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 MUM1L1Q5H9M0 696 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 RUFY4Q6ZNE9 571 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 LCA5Q86VQ0 697 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 ORC3Q9UBD5 711 aaPredicted RBP15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 GSTO1P78417 241 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 MRPL46Q9H2W6 279 aaKnown RBP15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 GNAT3A8MTJ3 354 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 DAPK3O43293 454 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 RPS6KA2Q15349 733 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 BANK1Q8NDB2 785 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 ASIC1P78348 528 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 PHLDB3Q6NSJ2 640 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 PDZD8Q8NEN9 1154 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 RILPQ96NA2 401 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 CCDC85AQ96PX6 553 aaPredicted RBP15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 LARSQ9P2J5 1176 aaKnown RBP15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 FHOD3Q2V2M9 1422 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 PPP4R1Q8TF05 950 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 PPME1Q9Y570 386 aa15.53■□□□□ 0.08
CSPG4P12-202ENST00000559989 STX10O60499 249 aa15.52■□□□□ 0.08
CSPG4P12-202ENST00000559989 C6orf50Q9HD87 102 aa15.52■□□□□ 0.08
CSPG4P12-202ENST00000559989 RBM27Q9P2N5 1060 aaKnown RBP15.52■□□□□ 0.08
CSPG4P12-202ENST00000559989 PPP2R3AQ06190 1150 aa15.52■□□□□ 0.08
CSPG4P12-202ENST00000559989 FRMD4BQ9Y2L6 1034 aa15.52■□□□□ 0.08
CSPG4P12-202ENST00000559989 LDHCP07864 332 aa15.52■□□□□ 0.08
CSPG4P12-202ENST00000559989 GIMAP6Q6P9H5 292 aa15.52■□□□□ 0.08
CSPG4P12-202ENST00000559989 EXOC6BQ9Y2D4 811 aa15.52■□□□□ 0.08
CSPG4P12-202ENST00000559989 KRT5P13647 590 aa15.52■□□□□ 0.07
CSPG4P12-202ENST00000559989 AOPEPQ8N6M6 819 aa15.52■□□□□ 0.07
CSPG4P12-202ENST00000559989 DDX21Q9NR30 783 aaKnown RBP eCLIP15.52■□□□□ 0.07
CSPG4P12-202ENST00000559989 CCDC125Q86Z20 511 aa15.52■□□□□ 0.07
CSPG4P12-202ENST00000559989 KRT23Q9C075 422 aa15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 RAPGEF2Q9Y4G8 1499 aa15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 MX2P20592 715 aa15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 NSMCE1Q8WV22 266 aa15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 AMOTQ4VCS5 1084 aa15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 IFIT1BQ5T764 474 aaKnown RBP15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 VWA3BQ502W6 1294 aa15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 HS2ST1Q7LGA3 356 aa15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 CNGA4Q8IV77 575 aa15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 TMTC2Q8N394 836 aa15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 RNF34Q969K3 372 aa15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 TPX2Q9ULW0 747 aaKnown RBP15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 IRX5P78411 483 aaPredicted RBP15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 WDR44Q5JSH3 913 aa15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 MICU3Q86XE3 530 aa15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 BAG5Q9UL15 447 aa15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 KLHL40Q2TBA0 621 aa15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 HSP90AA5PQ58FG0 334 aa15.51■□□□□ 0.07
CSPG4P12-202ENST00000559989 PLEKHH2Q8IVE3 1493 aa15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 CCT6AP40227 531 aaKnown RBP15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 LEO1Q8WVC0 666 aaPredicted RBP15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 ZNF830Q96NB3 372 aaPredicted RBP15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 NEK1Q96PY6 1258 aa15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 PROCA1Q8NCQ7 364 aaPredicted RBP15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 APOEP02649 317 aa15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 PPP2R5CQ13362 524 aa15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 KARSQ15046 597 aaKnown RBP15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 RAP1GDS1P52306 607 aa15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 LZTFL1Q9NQ48 299 aa15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 LIN9Q5TKA1 542 aa15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 GOLGA6BA6NDN3 693 aa15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 TSPY3P0CV98 308 aa15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 TSPY8P0CW00 308 aa15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 TAF7Q15545 349 aaPredicted RBP15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 CRNKL1Q9BZJ0 848 aaKnown RBP15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 GDPD2Q9HCC8 539 aa15.5■□□□□ 0.07
CSPG4P12-202ENST00000559989 WTAPQ15007 396 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 PDS5BQ9NTI5 1447 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 RTL1A6NKG5 1358 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 ATAD2Q6PL18 1390 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 CALM1P0DP23 149 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 CALM2P0DP24 149 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 CALM3P0DP25 149 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 ZSCAN22P10073 491 aaPredicted RBP15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 FAM200AQ8TCP9 573 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 GNAQP50148 359 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 ANKRD20A3Q5VUR7 823 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 RASEFQ8IZ41 740 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 GTF3C6Q969F1 213 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 ORC6Q9Y5N6 252 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 RBSNQ9H1K0 784 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 SPOPO43791 374 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 EPB41P11171 864 aaKnown RBP15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 RBBP5Q15291 538 aaKnown RBP15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 CCDC93Q567U6 631 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 C8orf74Q6P047 294 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 HEATR3Q7Z4Q2 680 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 DRC3Q9H069 523 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 PPP1R9AQ9ULJ8 1098 aa15.49■□□□□ 0.07
CSPG4P12-202ENST00000559989 TRIM68Q6AZZ1 485 aa15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 MICAL1Q8TDZ2 1067 aa15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 TROVE2P10155 538 aaKnown RBP eCLIP15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 CLCN1P35523 988 aa15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 ATP2B3Q16720 1220 aa15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 MYD88Q99836 296 aa15.48■□□□□ 0.07
CSPG4P12-202ENST00000559989 CCDC186Q7Z3E2 898 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms