RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 ATP2B3Q16720 1220 aa17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 METTL24Q5JXM2 366 aa17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 LARP1BQ659C4 914 aaKnown RBP17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 LDHAL6AQ6ZMR3 332 aa17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 LRP5O75197 1615 aa17.16■□□□□ 0.34
RABGGTA-212ENST00000559974 PDE8AO60658 829 aa17.16■□□□□ 0.34
RABGGTA-212ENST00000559974 CCDC173Q0VFZ6 552 aa17.16■□□□□ 0.34
RABGGTA-212ENST00000559974 Q6ZUG5 572 aa17.16■□□□□ 0.34
RABGGTA-212ENST00000559974 STOX1Q6ZVD7 989 aa17.16■□□□□ 0.34
RABGGTA-212ENST00000559974 ZNF34Q8IZ26 560 aa17.16■□□□□ 0.34
RABGGTA-212ENST00000559974 ANP32BQ92688 251 aaKnown RBP17.16■□□□□ 0.34
RABGGTA-212ENST00000559974 RBSNQ9H1K0 784 aa17.16■□□□□ 0.34
RABGGTA-212ENST00000559974 ARAP2Q8WZ64 1704 aa17.16■□□□□ 0.34
RABGGTA-212ENST00000559974 M0R2C6 588 aa17.15■□□□□ 0.34
RABGGTA-212ENST00000559974 ZPR1O75312 459 aa17.15■□□□□ 0.34
RABGGTA-212ENST00000559974 ZFYP08048 801 aaPredicted RBP17.15■□□□□ 0.34
RABGGTA-212ENST00000559974 CSPP1Q1MSJ5 1256 aa17.15■□□□□ 0.34
RABGGTA-212ENST00000559974 GTF3C6Q969F1 213 aa17.15■□□□□ 0.34
RABGGTA-212ENST00000559974 MYO5AQ9Y4I1 1855 aaKnown RBP17.15■□□□□ 0.34
RABGGTA-212ENST00000559974 ADRA2BP18089 450 aa17.15■□□□□ 0.34
RABGGTA-212ENST00000559974 UBE2HP62256 183 aa17.15■□□□□ 0.34
RABGGTA-212ENST00000559974 STK3Q13188 491 aa17.15■□□□□ 0.34
RABGGTA-212ENST00000559974 CNNM1Q9NRU3 951 aa17.15■□□□□ 0.34
RABGGTA-212ENST00000559974 FIBPO43427 364 aa17.14■□□□□ 0.33
RABGGTA-212ENST00000559974 SCARF1Q14162 830 aa17.14■□□□□ 0.33
RABGGTA-212ENST00000559974 DHX32Q7L7V1 743 aaKnown RBP17.14■□□□□ 0.33
RABGGTA-212ENST00000559974 PPP1R9BQ96SB3 815 aa17.14■□□□□ 0.33
RABGGTA-212ENST00000559974 CASZ1Q86V15 1759 aa17.13■□□□□ 0.33
RABGGTA-212ENST00000559974 DNM1Q05193 864 aaKnown RBP17.13■□□□□ 0.33
RABGGTA-212ENST00000559974 CCDC24Q8N4L8 307 aa17.13■□□□□ 0.33
RABGGTA-212ENST00000559974 VGLL2Q8N8G2 317 aa17.13■□□□□ 0.33
RABGGTA-212ENST00000559974 OSBP2Q969R2 916 aa17.13■□□□□ 0.33
RABGGTA-212ENST00000559974 RRAGDQ9NQL2 400 aaPredicted RBP17.13■□□□□ 0.33
RABGGTA-212ENST00000559974 DDX60Q8IY21 1712 aaKnown RBP17.13■□□□□ 0.33
RABGGTA-212ENST00000559974 LAMB2P55268 1798 aa17.13■□□□□ 0.33
RABGGTA-212ENST00000559974 HSP90B1P14625 803 aaKnown RBP17.13■□□□□ 0.33
RABGGTA-212ENST00000559974 ZAP70P43403 619 aa17.13■□□□□ 0.33
RABGGTA-212ENST00000559974 CDC37L1Q7L3B6 337 aa17.13■□□□□ 0.33
RABGGTA-212ENST00000559974 TRIM44Q96DX7 344 aaPredicted RBP17.13■□□□□ 0.33
RABGGTA-212ENST00000559974 NIP7Q9Y221 180 aaKnown RBP eCLIP17.13■□□□□ 0.33
RABGGTA-212ENST00000559974 NFIXQ14938 502 aa17.12■□□□□ 0.33
RABGGTA-212ENST00000559974 COL24A1Q17RW2 1714 aa17.12■□□□□ 0.33
RABGGTA-212ENST00000559974 SUSD4Q5VX71 490 aa17.12■□□□□ 0.33
RABGGTA-212ENST00000559974 BRF1Q92994 677 aa17.12■□□□□ 0.33
RABGGTA-212ENST00000559974 ZNF512BQ96KM6 892 aaPredicted RBP17.12■□□□□ 0.33
RABGGTA-212ENST00000559974 E7EWF7 191 aa17.11■□□□□ 0.33
RABGGTA-212ENST00000559974 FGD1P98174 961 aa17.11■□□□□ 0.33
RABGGTA-212ENST00000559974 WASHC4Q2M389 1173 aa17.11■□□□□ 0.33
RABGGTA-212ENST00000559974 APPBP2Q92624 585 aa17.11■□□□□ 0.33
RABGGTA-212ENST00000559974 MYH15Q9Y2K3 1946 aa17.11■□□□□ 0.33
RABGGTA-212ENST00000559974 PDE8BO95263 885 aa17.11■□□□□ 0.33
RABGGTA-212ENST00000559974 EXOSC10Q01780 885 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-212ENST00000559974 DDR1Q08345 913 aa17.11■□□□□ 0.33
RABGGTA-212ENST00000559974 LRRC2Q9BYS8 371 aa17.11■□□□□ 0.33
RABGGTA-212ENST00000559974 A0A0G2JLW4 131 aa17.1■□□□□ 0.33
RABGGTA-212ENST00000559974 MCAMP43121 646 aa17.1■□□□□ 0.33
RABGGTA-212ENST00000559974 CCDC183Q5T5S1 534 aa17.1■□□□□ 0.33
RABGGTA-212ENST00000559974 PI16Q6UXB8 463 aa17.1■□□□□ 0.33
RABGGTA-212ENST00000559974 AGXT2Q9BYV1 514 aa17.1■□□□□ 0.33
RABGGTA-212ENST00000559974 CTNNA3Q9UI47 895 aa17.1■□□□□ 0.33
RABGGTA-212ENST00000559974 PFKFB2O60825 505 aa17.09■□□□□ 0.33
RABGGTA-212ENST00000559974 ZBTB7AO95365 584 aa17.09■□□□□ 0.33
RABGGTA-212ENST00000559974 KRT85P78386 507 aa17.09■□□□□ 0.33
RABGGTA-212ENST00000559974 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.09■□□□□ 0.335e-6■■■■■ 34.6
RABGGTA-212ENST00000559974 TSPY26PQ9H489 355 aa17.09■□□□□ 0.33
RABGGTA-212ENST00000559974 MROH5Q6ZUA9 1318 aa17.09■□□□□ 0.33
RABGGTA-212ENST00000559974 JAK2O60674 1132 aa17.09■□□□□ 0.33
RABGGTA-212ENST00000559974 SCRN1Q12765 414 aa17.09■□□□□ 0.33
RABGGTA-212ENST00000559974 CLEC4GQ6UXB4 293 aa17.09■□□□□ 0.33
RABGGTA-212ENST00000559974 LLPHQ9BRT6 129 aaKnown RBP17.09■□□□□ 0.33
RABGGTA-212ENST00000559974 FOXP2O15409 715 aa17.08■□□□□ 0.33
RABGGTA-212ENST00000559974 TM4SF1P30408 202 aa17.08■□□□□ 0.33
RABGGTA-212ENST00000559974 TTF1Q15361 905 aaPredicted RBP17.08■□□□□ 0.33
RABGGTA-212ENST00000559974 TTLL5Q6EMB2 1281 aa17.08■□□□□ 0.33
RABGGTA-212ENST00000559974 ZSCAN25Q6NSZ9 544 aa17.08■□□□□ 0.33
RABGGTA-212ENST00000559974 FERMT3Q86UX7 667 aa17.08■□□□□ 0.33
RABGGTA-212ENST00000559974 ZNF652Q9Y2D9 606 aa17.08■□□□□ 0.33
RABGGTA-212ENST00000559974 DOCK2Q92608 1830 aa17.08■□□□□ 0.32
RABGGTA-212ENST00000559974 LETM1O95202 739 aaPredicted RBP17.08■□□□□ 0.32
RABGGTA-212ENST00000559974 NTSR2O95665 410 aa17.08■□□□□ 0.32
RABGGTA-212ENST00000559974 PUM3Q15397 648 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-212ENST00000559974 PARP10Q53GL7 1025 aa17.08■□□□□ 0.32
RABGGTA-212ENST00000559974 SMARCC2Q8TAQ2 1214 aa17.08■□□□□ 0.32
RABGGTA-212ENST00000559974 UTP14AQ9BVJ6 771 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-212ENST00000559974 PUS7LQ9H0K6 701 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-212ENST00000559974 ELP1O95163 1332 aa17.07■□□□□ 0.32
RABGGTA-212ENST00000559974 ARID4AP29374 1257 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-212ENST00000559974 APOBRQ0VD83 1088 aa17.07■□□□□ 0.32
RABGGTA-212ENST00000559974 IMMTQ16891 758 aaKnown RBP17.07■□□□□ 0.32
RABGGTA-212ENST00000559974 FLAD1Q8NFF5 587 aa17.07■□□□□ 0.32
RABGGTA-212ENST00000559974 GPAA1O43292 621 aa17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 UQCRFS1P1P0C7P4 283 aa17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 HCLS1P14317 486 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 ADD2P35612 726 aa17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 CCDC102BQ68D86 513 aa17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 FBXL16Q8N461 479 aa17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 LPIN2Q92539 896 aa17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 SETDB2Q96T68 719 aa17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 TNRC6CQ9HCJ0 1690 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-212ENST00000559974 CARMIL3Q8ND23 1372 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms