RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 GIMAP6Q6P9H5 292 aa12.47□□□□□ -0.41
TPM1-210ENST00000558264 STK11IPQ8N1F8 1099 aa12.47□□□□□ -0.41
TPM1-210ENST00000558264 LPIN2Q92539 896 aa12.47□□□□□ -0.41
TPM1-210ENST00000558264 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.47□□□□□ -0.41
TPM1-210ENST00000558264 INCENPQ9NQS7 918 aa12.47□□□□□ -0.41
TPM1-210ENST00000558264 MYO5AQ9Y4I1 1855 aaKnown RBP12.47□□□□□ -0.41
TPM1-210ENST00000558264 PDE6AP16499 860 aa12.47□□□□□ -0.41
TPM1-210ENST00000558264 ERFEQ4G0M1 354 aa12.47□□□□□ -0.41
TPM1-210ENST00000558264 NSUN7Q8NE18 718 aaKnown RBP12.47□□□□□ -0.41
TPM1-210ENST00000558264 TSPY26PQ9H489 355 aa12.47□□□□□ -0.41
TPM1-210ENST00000558264 PFKFB2O60825 505 aa12.46□□□□□ -0.41
TPM1-210ENST00000558264 FGFR2P21802 821 aa12.46□□□□□ -0.41
TPM1-210ENST00000558264 PDIA3P30101 505 aaKnown RBP12.46□□□□□ -0.41
TPM1-210ENST00000558264 KRT85P78386 507 aa12.46□□□□□ -0.41
TPM1-210ENST00000558264 CCDC152Q4G0S7 254 aa12.46□□□□□ -0.41
TPM1-210ENST00000558264 SPATA5Q8NB90 893 aa12.46□□□□□ -0.41
TPM1-210ENST00000558264 FTOQ9C0B1 505 aaKnown RBP eCLIP12.46□□□□□ -0.41
TPM1-210ENST00000558264 SRP68Q9UHB9 627 aaKnown RBP12.46□□□□□ -0.41
TPM1-210ENST00000558264 AKAP11Q9UKA4 1901 aa12.46□□□□□ -0.41
TPM1-210ENST00000558264 MROH5Q6ZUA9 1318 aa12.46□□□□□ -0.41
TPM1-210ENST00000558264 NWD2Q9ULI1 1742 aa12.46□□□□□ -0.41
TPM1-210ENST00000558264 ZNF213O14771 459 aa12.46□□□□□ -0.41
TPM1-210ENST00000558264 PRC1O43663 620 aa12.46□□□□□ -0.41
TPM1-210ENST00000558264 KDM4AO75164 1064 aa12.46□□□□□ -0.41
TPM1-210ENST00000558264 SLC5A1P13866 664 aa12.46□□□□□ -0.41
TPM1-210ENST00000558264 CCDC173Q0VFZ6 552 aa12.46□□□□□ -0.41
TPM1-210ENST00000558264 CCDC183Q5T5S1 534 aa12.46□□□□□ -0.41
TPM1-210ENST00000558264 MAGEB6Q8N7X4 407 aa12.46□□□□□ -0.41
TPM1-210ENST00000558264 SPEF2Q9C093 1822 aa12.46□□□□□ -0.42
TPM1-210ENST00000558264 IGHMBP2P38935 993 aaKnown RBP12.45□□□□□ -0.42
TPM1-210ENST00000558264 TBC1D10CQ8IV04 446 aa12.45□□□□□ -0.42
TPM1-210ENST00000558264 NBPF3Q9H094 633 aa12.45□□□□□ -0.42
TPM1-210ENST00000558264 CTNNA3Q9UI47 895 aa12.45□□□□□ -0.42
TPM1-210ENST00000558264 LIG1P18858 919 aa12.45□□□□□ -0.42
TPM1-210ENST00000558264 RXRAP19793 462 aa12.45□□□□□ -0.42
TPM1-210ENST00000558264 ARID4AP29374 1257 aaPredicted RBP12.45□□□□□ -0.42
TPM1-210ENST00000558264 ANTXR2P58335 489 aa12.45□□□□□ -0.42
TPM1-210ENST00000558264 CHRNDQ07001 517 aa12.45□□□□□ -0.42
TPM1-210ENST00000558264 CAMK4Q16566 473 aa12.45□□□□□ -0.42
TPM1-210ENST00000558264 PARP10Q53GL7 1025 aa12.45□□□□□ -0.42
TPM1-210ENST00000558264 OTUD7BQ6GQQ9 843 aa12.45□□□□□ -0.42
TPM1-210ENST00000558264 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.45□□□□□ -0.42
TPM1-210ENST00000558264 GTF2E1P29083 439 aaPredicted RBP12.45□□□□□ -0.42
TPM1-210ENST00000558264 RALYLQ86SE5 291 aaKnown RBP12.45□□□□□ -0.42
TPM1-210ENST00000558264 MPNDQ8N594 471 aa12.45□□□□□ -0.42
TPM1-210ENST00000558264 SMARCC1Q92922 1105 aaPredicted RBP12.45□□□□□ -0.42
TPM1-210ENST00000558264 AIDAQ96BJ3 306 aa12.45□□□□□ -0.42
TPM1-210ENST00000558264 SPATA32Q96LK8 384 aa12.45□□□□□ -0.42
TPM1-210ENST00000558264 ARMT1Q9H993 441 aa12.45□□□□□ -0.42
TPM1-210ENST00000558264 KLF18A0A0U1RQI7 1052 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 RESTQ13127 1097 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 TTF1Q15361 905 aaPredicted RBP12.44□□□□□ -0.42
TPM1-210ENST00000558264 TBC1D9BQ66K14 1250 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 AMIGO3Q86WK7 504 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 MIGA1Q8NAN2 632 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 GJB4Q9NTQ9 266 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 BCL9LQ86UU0 1499 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 ABCC12Q96J65 1359 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 GOLGA8BA8MQT2 603 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 ESPNB1AK53 854 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 PRKAB2O43741 272 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 MBD4O95243 580 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 UQCRFS1P1P0C7P4 283 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 MB21D2Q8IYB1 491 aaPredicted RBP12.44□□□□□ -0.42
TPM1-210ENST00000558264 SMARCC2Q8TAQ2 1214 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 PPP1R9BQ96SB3 815 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 AGXT2Q9BYV1 514 aa12.44□□□□□ -0.42
TPM1-210ENST00000558264 TCRBV5S4A2TA0A5A2 114 aa12.43□□□□□ -0.42
TPM1-210ENST00000558264 PHF14O94880 888 aa12.43□□□□□ -0.42
TPM1-210ENST00000558264 GYG1P46976 350 aa12.43□□□□□ -0.42
TPM1-210ENST00000558264 ZSCAN25Q6NSZ9 544 aa12.43□□□□□ -0.42
TPM1-210ENST00000558264 CCDC144CPQ8IYA2 1237 aa12.43□□□□□ -0.42
TPM1-210ENST00000558264 NCOA7Q8NI08 942 aa12.43□□□□□ -0.42
TPM1-210ENST00000558264 LEO1Q8WVC0 666 aaPredicted RBP12.43□□□□□ -0.42
TPM1-210ENST00000558264 SENP2Q9HC62 589 aa12.43□□□□□ -0.42
TPM1-210ENST00000558264 ZNF652Q9Y2D9 606 aa12.43□□□□□ -0.42
TPM1-210ENST00000558264 TAF1P21675 1872 aa12.43□□□□□ -0.42
TPM1-210ENST00000558264 B4E1Z4 1266 aa12.43□□□□□ -0.42
TPM1-210ENST00000558264 MCM5P33992 734 aa12.43□□□□□ -0.42
TPM1-210ENST00000558264 CTDSPL2Q05D32 466 aa12.43□□□□□ -0.42
TPM1-210ENST00000558264 CSPP1Q1MSJ5 1256 aa12.43□□□□□ -0.42
TPM1-210ENST00000558264 CYB5R4Q7L1T6 521 aa12.43□□□□□ -0.42
TPM1-210ENST00000558264 SLC51AQ86UW1 340 aa12.43□□□□□ -0.42
TPM1-210ENST00000558264 ZNF512BQ96KM6 892 aaPredicted RBP12.43□□□□□ -0.42
TPM1-210ENST00000558264 DDX60Q8IY21 1712 aaKnown RBP12.43□□□□□ -0.42
TPM1-210ENST00000558264 LRP5O75197 1615 aa12.42□□□□□ -0.42
TPM1-210ENST00000558264 GOLGA6L4A6NEF3 574 aa12.42□□□□□ -0.42
TPM1-210ENST00000558264 GNPATO15228 680 aa12.42□□□□□ -0.42
TPM1-210ENST00000558264 EPB41L4AQ9HCS5 686 aaPredicted RBP12.42□□□□□ -0.42
TPM1-210ENST00000558264 ABCF2Q9UG63 623 aa12.42□□□□□ -0.42
TPM1-210ENST00000558264 USP21Q9UK80 565 aa12.42□□□□□ -0.42
TPM1-210ENST00000558264 EP400Q96L91 3159 aa12.42□□□□□ -0.42
TPM1-210ENST00000558264 FDPSP14324 419 aaKnown RBP12.42□□□□□ -0.42
TPM1-210ENST00000558264 UBE3CQ15386 1083 aa12.42□□□□□ -0.42
TPM1-210ENST00000558264 VPS72Q15906 364 aa12.42□□□□□ -0.42
TPM1-210ENST00000558264 CELF1Q92879 486 aaKnown RBP12.42□□□□□ -0.42
TPM1-210ENST00000558264 AK7Q96M32 723 aa12.42□□□□□ -0.42
TPM1-210ENST00000558264 STRBPQ96SI9 672 aaKnown RBP12.42□□□□□ -0.42
TPM1-210ENST00000558264 BCL2L12Q9HB09 334 aa12.42□□□□□ -0.42
TPM1-210ENST00000558264 MYH7P12883 1935 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms