RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 TJP1Q07157 1748 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 H7C1W4 665 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 DTNBO60941 627 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 FOXO4P98177 505 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 RESTQ13127 1097 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 NOLC1Q14978 699 aaKnown RBP eCLIP6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 MAP3K11Q16584 847 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 MCMDC2Q4G0Z9 681 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 KBTBD3Q8NAB2 608 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 FAM200AQ8TCP9 573 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 LEO1Q8WVC0 666 aaPredicted RBP6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 TCEANC2Q96MN5 208 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 NEK1Q96PY6 1258 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 HS3ST6Q96QI5 342 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 DBNDD2Q9BQY9 259 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 LLPHQ9BRT6 129 aaKnown RBP6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 TMUB1Q9BVT8 246 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 AGXT2Q9BYV1 514 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 NUP62CLQ9H1M0 184 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 DDX19AQ9NUU7 478 aaKnown RBP6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 NLRP2Q9NX02 1062 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 BOLA1Q9Y3E2 137 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 MRVI1Q9Y6F6 885 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 CPDO75976 1380 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 PAPPAQ13219 1627 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 SPEF2Q9C093 1822 aa6.14□□□□□ -1.43
ATPAF1-212ENST00000542495 CYP21A2P08686 494 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 RXRBP28702 533 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 GTF2F1P35269 517 aaKnown RBP eCLIP6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 TYRO3Q06418 890 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 FAM173BQ6P4H8 233 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 ATG9AQ7Z3C6 839 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 UBE3BQ7Z3V4 1068 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 FERMT3Q86UX7 667 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 TTC5Q8N0Z6 440 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 MYRIPQ8NFW9 859 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 KIAA1524Q8TCG1 905 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 PGBD1Q96JS3 809 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 PRIMPOLQ96LW4 560 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 ZNF830Q96NB3 372 aaPredicted RBP6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 KCNF1Q9H3M0 494 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 CLSTN2Q9H4D0 955 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 TTC12Q9H892 705 aaPredicted RBP6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 LAMA4Q16363 1823 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 MYH15Q9Y2K3 1946 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 A0A087WZG4 1122 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 NBPF26B4DH59 902 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 SNPHO15079 494 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 JAK2O60674 1132 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 PFKFB2O60825 505 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 HMGB1P09429 215 aaKnown RBP6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 ADD1P35611 737 aaKnown RBP6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 EMP3P54852 163 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 HMGN5P82970 282 aaKnown RBP6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 EXOSC10Q01780 885 aaKnown RBP6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 GLIPR1L2Q4G1C9 344 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 NBPF14Q5TI25 921 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 NAA16Q6N069 864 aaPredicted RBP6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 NBPF10Q6P3W6 841 aaKnown RBP6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 Q6ZUG5 572 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 STOX1Q6ZVD7 989 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 MTERF4Q7Z6M4 381 aaKnown RBP6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 FBXL16Q8N461 479 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 NBPF15Q8N660 670 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 JARID2Q92833 1246 aaPredicted RBP6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 SPATA32Q96LK8 384 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 SEC62Q99442 399 aaKnown RBP6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 DSCC1Q9BVC3 393 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 ZSCAN16Q9H4T2 348 aaPredicted RBP6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 HELLSQ9NRZ9 838 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 DACT1Q9NYF0 836 aa6.13□□□□□ -1.43
ATPAF1-212ENST00000542495 TNS3Q68CZ2 1445 aa6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 NUTM2BA6NNL0 878 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 NUTM2EB1AL46 878 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 ATP5J2-PTCD1G3V325 749 aa6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 PTCD1O75127 700 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 CHGBP05060 677 aa6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 SCRN1Q12765 414 aa6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 ZMYM1Q5SVZ6 1142 aa6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 LMBR1LQ6UX01 489 aa6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 CCDC129Q6ZRS4 1044 aa6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 DHX32Q7L7V1 743 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 NUTM2AQ8IVF1 878 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 NSUN7Q8NE18 718 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 TDRD7Q8NHU6 1098 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 BRF1Q92994 677 aa6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 TNMDQ9H2S6 317 aa6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 OCEL1Q9H607 264 aa6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 CBX8Q9HC52 389 aa6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 ATG3Q9NT62 314 aa6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 TFIP11Q9UBB9 837 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 KCPQ6ZWJ8 1503 aa6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 SALL1Q9NSC2 1324 aa6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 NHSL1Q5SYE7 1610 aa6.12□□□□□ -1.43
ATPAF1-212ENST00000542495 GOLGA6L6A8MZA4 724 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 NR1I2O75469 434 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 CIAO1O76071 339 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 CTDNEP1O95476 244 aa6.11□□□□□ -1.43
ATPAF1-212ENST00000542495 CAVIN2O95810 425 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms