RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 RTN1Q16799 776 aa16.69■□□□□ 0.26
GCFC2-211ENST00000541687 MKNK2Q9HBH9 465 aa16.69■□□□□ 0.26
GCFC2-211ENST00000541687 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
GCFC2-211ENST00000541687 AXIN2Q9Y2T1 843 aa16.69■□□□□ 0.26
GCFC2-211ENST00000541687 USP5P45974 858 aa16.68■□□□□ 0.26
GCFC2-211ENST00000541687 CCDC191Q8NCU4 936 aa16.68■□□□□ 0.26
GCFC2-211ENST00000541687 KIF2AO00139 706 aaPredicted RBP16.68■□□□□ 0.26
GCFC2-211ENST00000541687 UQCRFS1P1P0C7P4 283 aa16.68■□□□□ 0.26
GCFC2-211ENST00000541687 CATIPQ7Z7H3 387 aa16.68■□□□□ 0.26
GCFC2-211ENST00000541687 MYO3AQ8NEV4 1616 aa16.68■□□□□ 0.26
GCFC2-211ENST00000541687 CCDC66A2RUB6 948 aa16.68■□□□□ 0.26
GCFC2-211ENST00000541687 POLR3GO15318 223 aaPredicted RBP16.68■□□□□ 0.26
GCFC2-211ENST00000541687 GNG11P61952 73 aa16.68■□□□□ 0.26
GCFC2-211ENST00000541687 ZSCAN12O43309 604 aa16.67■□□□□ 0.26
GCFC2-211ENST00000541687 MBD4O95243 580 aa16.67■□□□□ 0.26
GCFC2-211ENST00000541687 TMCO3Q6UWJ1 677 aa16.67■□□□□ 0.26
GCFC2-211ENST00000541687 PAXBP1Q9Y5B6 917 aa16.67■□□□□ 0.26
GCFC2-211ENST00000541687 HSPD1P10809 573 aaKnown RBP16.67■□□□□ 0.26
GCFC2-211ENST00000541687 STX17P56962 302 aa16.67■□□□□ 0.26
GCFC2-211ENST00000541687 SCRN1Q12765 414 aa16.67■□□□□ 0.26
GCFC2-211ENST00000541687 NRBP1Q9UHY1 535 aa16.67■□□□□ 0.26
GCFC2-211ENST00000541687 ACBD3Q9H3P7 528 aa16.67■□□□□ 0.26
GCFC2-211ENST00000541687 ATP10DQ9P241 1426 aa16.67■□□□□ 0.26
GCFC2-211ENST00000541687 NECTIN1Q15223 517 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 DZIP1Q86YF9 867 aaKnown RBP16.66■□□□□ 0.26
GCFC2-211ENST00000541687 PYCARDQ9ULZ3 195 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 NIP7Q9Y221 180 aaKnown RBP eCLIP16.66■□□□□ 0.26
GCFC2-211ENST00000541687 IGKV5-2P06315 115 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 KIF4BQ2VIQ3 1234 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 APPBP2Q92624 585 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 PCDH11XQ9BZA7 1347 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 PCDH11YQ9BZA8 1340 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 EIF5P55010 431 aaKnown RBP16.66■□□□□ 0.26
GCFC2-211ENST00000541687 SOGA3Q5TF21 947 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 COPRSQ9NQ92 184 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 ANKIB1Q9P2G1 1089 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 CGNQ9P2M7 1197 aaKnown RBP16.66■□□□□ 0.26
GCFC2-211ENST00000541687 CRB1P82279 1406 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 TSPY2A6NKD2 308 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 STIM1Q13586 685 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 DHX58Q96C10 678 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 TANGO6Q9C0B7 1094 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 ZNHIT6Q9NWK9 470 aaKnown RBP16.66■□□□□ 0.26
GCFC2-211ENST00000541687 ZNF652Q9Y2D9 606 aa16.66■□□□□ 0.26
GCFC2-211ENST00000541687 ATP6V1AP38606 617 aa16.65■□□□□ 0.26
GCFC2-211ENST00000541687 AXDND1Q5T1B0 1012 aaPredicted RBP16.65■□□□□ 0.26
GCFC2-211ENST00000541687 SYT10Q6XYQ8 523 aa16.65■□□□□ 0.26
GCFC2-211ENST00000541687 AK7Q96M32 723 aa16.65■□□□□ 0.26
GCFC2-211ENST00000541687 HAUS7Q99871 368 aa16.65■□□□□ 0.26
GCFC2-211ENST00000541687 ARMT1Q9H993 441 aa16.65■□□□□ 0.26
GCFC2-211ENST00000541687 PI16Q6UXB8 463 aa16.65■□□□□ 0.26
GCFC2-211ENST00000541687 ADORA1P30542 326 aa16.65■□□□□ 0.26
GCFC2-211ENST00000541687 CASQ1P31415 396 aa16.65■□□□□ 0.26
GCFC2-211ENST00000541687 CHGBP05060 677 aa16.64■□□□□ 0.26
GCFC2-211ENST00000541687 PTPN12Q05209 780 aaKnown RBP16.64■□□□□ 0.26
GCFC2-211ENST00000541687 CCDC150Q8NCX0 1101 aa16.64■□□□□ 0.26
GCFC2-211ENST00000541687 MYRIPQ8NFW9 859 aa16.64■□□□□ 0.26
GCFC2-211ENST00000541687 LLPHQ9BRT6 129 aaKnown RBP16.64■□□□□ 0.26
GCFC2-211ENST00000541687 VAT1LQ9HCJ6 419 aa16.64■□□□□ 0.26
GCFC2-211ENST00000541687 MROH2AA6NES4 1674 aa16.64■□□□□ 0.25
GCFC2-211ENST00000541687 PRDM1O75626 825 aa16.64■□□□□ 0.25
GCFC2-211ENST00000541687 CYP2E1P05181 493 aaPredicted RBP16.64■□□□□ 0.25
GCFC2-211ENST00000541687 ADD1P35611 737 aaKnown RBP16.64■□□□□ 0.25
GCFC2-211ENST00000541687 EPS15P42566 896 aa16.64■□□□□ 0.25
GCFC2-211ENST00000541687 ANO1Q5XXA6 986 aa16.64■□□□□ 0.25
GCFC2-211ENST00000541687 hCG_1642624A0A1W2PR95 340 aa16.64■□□□□ 0.25
GCFC2-211ENST00000541687 NOM1Q5C9Z4 860 aaKnown RBP16.64■□□□□ 0.25
GCFC2-211ENST00000541687 MEX3CQ5U5Q3 659 aaKnown RBP16.64■□□□□ 0.25
GCFC2-211ENST00000541687 BTG4Q9NY30 223 aa16.64■□□□□ 0.25
GCFC2-211ENST00000541687 NUP88Q99567 741 aaPredicted RBP16.64■□□□□ 0.25
GCFC2-211ENST00000541687 DEF6Q9H4E7 631 aa16.64■□□□□ 0.25
GCFC2-211ENST00000541687 CTDSPL2Q05D32 466 aa16.63■□□□□ 0.25
GCFC2-211ENST00000541687 ANGEL1Q9UNK9 670 aaKnown RBP16.63■□□□□ 0.25
GCFC2-211ENST00000541687 CCDC152Q4G0S7 254 aa16.63■□□□□ 0.25
GCFC2-211ENST00000541687 BRAPQ7Z569 592 aa16.63■□□□□ 0.25
GCFC2-211ENST00000541687 CMTR1Q8N1G2 835 aaKnown RBP16.63■□□□□ 0.25
GCFC2-211ENST00000541687 CDC5LQ99459 802 aaKnown RBP16.63■□□□□ 0.25
GCFC2-211ENST00000541687 KRT23Q9C075 422 aa16.63■□□□□ 0.25
GCFC2-211ENST00000541687 GPHNQ9NQX3 736 aaPredicted RBP16.63■□□□□ 0.25
GCFC2-211ENST00000541687 STX8Q9UNK0 236 aa16.63■□□□□ 0.25
GCFC2-211ENST00000541687 MRVI1Q9Y6F6 885 aa16.63■□□□□ 0.25
GCFC2-211ENST00000541687 ZNF202O95125 648 aa16.63■□□□□ 0.25
GCFC2-211ENST00000541687 TRERF1Q96PN7 1200 aa16.63■□□□□ 0.25
GCFC2-211ENST00000541687 ERBB3P21860 1342 aa16.63■□□□□ 0.25
GCFC2-211ENST00000541687 FGAP02671 866 aa16.62■□□□□ 0.25
GCFC2-211ENST00000541687 KRT18P05783 430 aaKnown RBP16.62■□□□□ 0.25
GCFC2-211ENST00000541687 U2AF2P26368 475 aaKnown RBP eCLIP16.62■□□□□ 0.259e-8■■■■□ 21.5
GCFC2-211ENST00000541687 IFIT1BQ5T764 474 aaKnown RBP16.62■□□□□ 0.25
GCFC2-211ENST00000541687 PIK3C2BO00750 1634 aa16.62■□□□□ 0.25
GCFC2-211ENST00000541687 KIAA1210Q9ULL0 1709 aa16.62■□□□□ 0.25
GCFC2-211ENST00000541687 ESR2Q92731 530 aa16.62■□□□□ 0.25
GCFC2-211ENST00000541687 UTP14AQ9BVJ6 771 aaKnown RBP16.62■□□□□ 0.25
GCFC2-211ENST00000541687 RNF216Q9NWF9 866 aaPredicted RBP16.62■□□□□ 0.25
GCFC2-211ENST00000541687 CCDC194A0A1B0GVG4 234 aa16.62■□□□□ 0.25
GCFC2-211ENST00000541687 FAM193AP78312 1265 aa16.62■□□□□ 0.25
GCFC2-211ENST00000541687 NAA16Q6N069 864 aaPredicted RBP16.62■□□□□ 0.25
GCFC2-211ENST00000541687 TSPYL1Q9H0U9 437 aa16.62■□□□□ 0.25
GCFC2-211ENST00000541687 DIP2CQ9Y2E4 1556 aa16.62■□□□□ 0.25
GCFC2-211ENST00000541687 DDIT3P35638 169 aa16.61■□□□□ 0.25
GCFC2-211ENST00000541687 DHX37Q8IY37 1157 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms