RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 NEK11Q8NG66 645 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 STIM2Q9P246 746 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 GIGYF1O75420 1035 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 PPFIBP2Q8ND30 876 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 MMRN2Q9H8L6 949 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 RTL9Q8NET4 1388 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 GPATCH8Q9UKJ3 1502 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 ATP2A1O14983 1001 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 PPFIA3O75145 1194 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 IL15P40933 162 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 DAAM2Q86T65 1068 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 SLF2Q8IX21 1173 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 IQUBQ8NA54 791 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 TRIM7Q9C029 511 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 CALML3P27482 149 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 KSR2Q6VAB6 950 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 IGSF22Q8N9C0 903 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 ERMNQ8TAM6 284 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 IFT81Q8WYA0 676 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 IQCGQ9H095 443 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 SNRKQ9NRH2 765 aa16.91■□□□□ 0.3
SMARCA4-207ENST00000541122 ASIC1P78348 528 aa16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 RPGRIP1Q96KN7 1286 aa16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 KIF24Q5T7B8 1368 aa16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 TBCAO75347 108 aaKnown RBP16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 ATP5DP30049 168 aa16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 ACTN2P35609 894 aa16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 NLRP12P59046 1061 aa16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 PPP1R14CQ8TAE6 165 aa16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 LEO1Q8WVC0 666 aaPredicted RBP16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 SREK1Q8WXA9 508 aaKnown RBP16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 TMTC1Q8IUR5 882 aa16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 CFAP43Q8NDM7 1665 aa16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 TSPY2A6NKD2 308 aa16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 APOBRQ0VD83 1088 aa16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 LDHAL6AQ6ZMR3 332 aa16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 LMNTD2Q8IXW0 634 aa16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 MLKLQ8NB16 471 aa16.9■□□□□ 0.3
SMARCA4-207ENST00000541122 SSH2Q76I76 1423 aa16.89■□□□□ 0.3
SMARCA4-207ENST00000541122 A0A1B0GVL5 298 aa16.89■□□□□ 0.29
SMARCA4-207ENST00000541122 SPTY2D1Q68D10 685 aaPredicted RBP16.89■□□□□ 0.29
SMARCA4-207ENST00000541122 PPP4R3AQ6IN85 833 aa16.89■□□□□ 0.29
SMARCA4-207ENST00000541122 SPATS2Q86XZ4 545 aaKnown RBP16.89■□□□□ 0.29
SMARCA4-207ENST00000541122 ZSCAN29Q8IWY8 852 aaPredicted RBP16.89■□□□□ 0.29
SMARCA4-207ENST00000541122 PLCD3Q8N3E9 789 aa16.89■□□□□ 0.29
SMARCA4-207ENST00000541122 CCDC26Q8TAB7 109 aa16.89■□□□□ 0.29
SMARCA4-207ENST00000541122 PRDM11Q9NQV5 511 aa16.89■□□□□ 0.29
SMARCA4-207ENST00000541122 PAG1Q9NWQ8 432 aa16.89■□□□□ 0.29
SMARCA4-207ENST00000541122 SNX14Q9Y5W7 946 aa16.89■□□□□ 0.29
SMARCA4-207ENST00000541122 ATP11AP98196 1134 aa16.89■□□□□ 0.29
SMARCA4-207ENST00000541122 TRMT112Q9UI30 125 aaKnown RBP16.89■□□□□ 0.29
SMARCA4-207ENST00000541122 GOLGA6BA6NDN3 693 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 RNF113AO15541 343 aaKnown RBP16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 CLNS1AP54105 237 aaKnown RBP16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 MXRA7P84157 204 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 RUFY4Q6ZNE9 571 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 IFT20Q8IY31 132 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 TEX13AQ9BXU3 409 aaPredicted RBP16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 KRT13P13646 458 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 C8orf74Q6P047 294 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 USHBP1Q8N6Y0 703 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 LRRC45Q96CN5 670 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 ATP8B1O43520 1251 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 KRT2P35908 639 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 GADD45BO75293 160 aaPredicted RBP16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 LDHCP07864 332 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 ZBTB16Q05516 673 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 ANKRD13DQ6ZTN6 518 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 WDR66Q8TBY9 1149 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 TMOD3Q9NYL9 352 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 CHPF2Q9P2E5 772 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 DUOX2Q9NRD8 1548 aa16.88■□□□□ 0.29
SMARCA4-207ENST00000541122 STX17P56962 302 aa16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 SARNPP82979 210 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 IFIT1BQ5T764 474 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 NAA16Q6N069 864 aaPredicted RBP16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 LINS1Q8NG48 757 aa16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 ADGRL1O94910 1474 aa16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 MSH6P52701 1360 aa16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 ALDH3A1P30838 453 aa16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 MAP2K2P36507 400 aa16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 RILPL1Q5EBL4 403 aa16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 USP37Q86T82 979 aa16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 NAP1L3Q99457 506 aaPredicted RBP16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 MPHOSPH10O00566 681 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 SNRPA1P09661 255 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 PAIP2Q9BPZ3 127 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 HELLSQ9NRZ9 838 aa16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 RBM28Q9NW13 759 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 ANO1Q5XXA6 986 aa16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 FERMT1Q9BQL6 677 aa16.87■□□□□ 0.29
SMARCA4-207ENST00000541122 EFCAB8A8MWE9 144 aa16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 SGSM2O43147 1006 aa16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 TSPYL6Q8N831 410 aa16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 GOLGA5Q8TBA6 731 aa16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 JAKMIP2Q96AA8 810 aa16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 KIF21AQ7Z4S6 1674 aa16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 INTS8Q75QN2 995 aaKnown RBP16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 TSNARE1Q96NA8 513 aa16.86■□□□□ 0.29
SMARCA4-207ENST00000541122 NUP58Q9BVL2 599 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms