RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 THAP11Q96EK4 314 aa12.17□□□□□ -0.46
LRP6-205ENST00000540527 USP25Q9UHP3 1055 aa12.17□□□□□ -0.46
LRP6-205ENST00000540527 SERTAD1Q9UHV2 236 aa12.17□□□□□ -0.46
LRP6-205ENST00000540527 COLQQ9Y215 455 aaPredicted RBP12.17□□□□□ -0.46
LRP6-205ENST00000540527 PRRT4C9JH25 899 aa12.16□□□□□ -0.46
LRP6-205ENST00000540527 DXOO77932 396 aaKnown RBP12.16□□□□□ -0.46
LRP6-205ENST00000540527 CPEP16870 476 aa12.16□□□□□ -0.46
LRP6-205ENST00000540527 GARTP22102 1010 aa12.16□□□□□ -0.46
LRP6-205ENST00000540527 SCTRP47872 440 aa12.16□□□□□ -0.46
LRP6-205ENST00000540527 CCDC85BQ15834 202 aaPredicted RBP12.16□□□□□ -0.46
LRP6-205ENST00000540527 PRPF40BQ6NWY9 871 aaKnown RBP12.16□□□□□ -0.46
LRP6-205ENST00000540527 NKD1Q969G9 470 aa12.16□□□□□ -0.46
LRP6-205ENST00000540527 CHMP4CQ96CF2 233 aa12.16□□□□□ -0.46
LRP6-205ENST00000540527 AASDHPPTQ9NRN7 309 aa12.16□□□□□ -0.46
LRP6-205ENST00000540527 NOB1Q9ULX3 412 aaKnown RBP12.16□□□□□ -0.46
LRP6-205ENST00000540527 PPT2Q9UMR5 302 aa12.16□□□□□ -0.46
LRP6-205ENST00000540527 PDZRN3Q9UPQ7 1066 aa12.16□□□□□ -0.46
LRP6-205ENST00000540527 RFPL1O75677 317 aa12.15□□□□□ -0.46
LRP6-205ENST00000540527 DGKGP49619 791 aa12.15□□□□□ -0.46
LRP6-205ENST00000540527 MAP3K10Q02779 954 aa12.15□□□□□ -0.46
LRP6-205ENST00000540527 CCDC184Q52MB2 194 aa12.15□□□□□ -0.46
LRP6-205ENST00000540527 ARSIQ5FYB1 569 aa12.15□□□□□ -0.46
LRP6-205ENST00000540527 SAMD7Q7Z3H4 446 aa12.15□□□□□ -0.46
LRP6-205ENST00000540527 MORC1Q86VD1 984 aa12.15□□□□□ -0.46
LRP6-205ENST00000540527 GPR152Q8TDT2 470 aa12.15□□□□□ -0.46
LRP6-205ENST00000540527 LHX6Q9UPM6 363 aa12.15□□□□□ -0.46
LRP6-205ENST00000540527 CHMP3Q9Y3E7 222 aa12.15□□□□□ -0.46
LRP6-205ENST00000540527 A6NHS1 94 aa12.14□□□□□ -0.47
LRP6-205ENST00000540527 C19orf67A6NJJ6 358 aa12.14□□□□□ -0.47
LRP6-205ENST00000540527 GJB6O95452 261 aa12.14□□□□□ -0.47
LRP6-205ENST00000540527 EYA4O95677 639 aa12.14□□□□□ -0.47
LRP6-205ENST00000540527 PPM1FP49593 454 aaPredicted RBP12.14□□□□□ -0.47
LRP6-205ENST00000540527 PABPC4Q13310 644 aaKnown RBP eCLIP12.14□□□□□ -0.47
LRP6-205ENST00000540527 MTMR1Q13613 665 aa12.14□□□□□ -0.47
LRP6-205ENST00000540527 TBCELQ5QJ74 424 aa12.14□□□□□ -0.47
LRP6-205ENST00000540527 IL31Q6EBC2 164 aa12.14□□□□□ -0.47
LRP6-205ENST00000540527 SMAD5Q99717 465 aaKnown RBP12.14□□□□□ -0.47
LRP6-205ENST00000540527 TRIM56Q9BRZ2 755 aaKnown RBP12.14□□□□□ -0.47
LRP6-205ENST00000540527 HERPUD2Q9BSE4 406 aa12.14□□□□□ -0.47
LRP6-205ENST00000540527 IFT122Q9HBG6 1241 aa12.14□□□□□ -0.47
LRP6-205ENST00000540527 OBP2AQ9NY56 170 aa12.14□□□□□ -0.47
LRP6-205ENST00000540527 SEPT9Q9UHD8 586 aaPredicted RBP12.14□□□□□ -0.47
LRP6-205ENST00000540527 ZNF180Q9UJW8 692 aa12.14□□□□□ -0.47
LRP6-205ENST00000540527 PRPF3O43395 683 aaKnown RBP12.13□□□□□ -0.47
LRP6-205ENST00000540527 FAM98CQ17RN3 349 aaKnown RBP12.13□□□□□ -0.47
LRP6-205ENST00000540527 LARP1BQ659C4 914 aaKnown RBP12.13□□□□□ -0.47
LRP6-205ENST00000540527 ZBTB46Q86UZ6 589 aa12.13□□□□□ -0.47
LRP6-205ENST00000540527 PJA1Q8NG27 643 aa12.13□□□□□ -0.47
LRP6-205ENST00000540527 IFT43Q96FT9 208 aa12.13□□□□□ -0.47
LRP6-205ENST00000540527 SELENOOQ9BVL4 669 aa12.13□□□□□ -0.47
LRP6-205ENST00000540527 SARGQ9BW04 601 aa12.13□□□□□ -0.47
LRP6-205ENST00000540527 MUC3BQ9H195 1237 aa12.13□□□□□ -0.47
LRP6-205ENST00000540527 STRN4Q9NRL3 753 aa12.13□□□□□ -0.47
LRP6-205ENST00000540527 PUF60Q9UHX1 559 aaKnown RBP12.13□□□□□ -0.47
LRP6-205ENST00000540527 FBXO2Q9UK22 296 aaPredicted RBP12.13□□□□□ -0.47
LRP6-205ENST00000540527 ASAP1Q9ULH1 1129 aa12.13□□□□□ -0.47
LRP6-205ENST00000540527 FRMD4BQ9Y2L6 1034 aa12.13□□□□□ -0.47
LRP6-205ENST00000540527 KLRG2A4D1S0 409 aaPredicted RBP12.12□□□□□ -0.47
LRP6-205ENST00000540527 RASSF10A6NK89 507 aa12.12□□□□□ -0.47
LRP6-205ENST00000540527 RNF40O75150 1001 aa12.12□□□□□ -0.47
LRP6-205ENST00000540527 BCAMP50895 628 aa12.12□□□□□ -0.47
LRP6-205ENST00000540527 NEK3P51956 506 aa12.12□□□□□ -0.47
LRP6-205ENST00000540527 GEMIN4P57678 1058 aaKnown RBP12.12□□□□□ -0.47
LRP6-205ENST00000540527 DGKZQ13574 1117 aa12.12□□□□□ -0.47
LRP6-205ENST00000540527 LONRF2Q1L5Z9 754 aa12.12□□□□□ -0.47
LRP6-205ENST00000540527 MSS51Q4VC12 460 aa12.12□□□□□ -0.47
LRP6-205ENST00000540527 NGDNQ8NEJ9 315 aaKnown RBP12.12□□□□□ -0.47
LRP6-205ENST00000540527 STRBPQ96SI9 672 aaKnown RBP12.12□□□□□ -0.47
LRP6-205ENST00000540527 UNC93B1Q9H1C4 597 aa12.12□□□□□ -0.47
LRP6-205ENST00000540527 ESF1Q9H501 851 aaKnown RBP12.12□□□□□ -0.47
LRP6-205ENST00000540527 ATG3Q9NT62 314 aa12.12□□□□□ -0.47
LRP6-205ENST00000540527 FAM13BQ9NYF5 915 aa12.12□□□□□ -0.47
LRP6-205ENST00000540527 POLG2Q9UHN1 485 aa12.12□□□□□ -0.47
LRP6-205ENST00000540527 NOL7Q9UMY1 257 aaKnown RBP12.12□□□□□ -0.47
LRP6-205ENST00000540527 PHLDB1Q86UU1 1377 aa12.12□□□□□ -0.47
LRP6-205ENST00000540527 DYTNA2CJ06 578 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 TNFRSF21O75509 655 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 STAU1O95793 577 aaKnown RBP12.11□□□□□ -0.47
LRP6-205ENST00000540527 POTEIP0CG38 1075 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 SARSP49591 514 aaKnown RBP12.11□□□□□ -0.47
LRP6-205ENST00000540527 CASP7P55210 303 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 WNT7BP56706 349 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 FAM160A1Q05DH4 1040 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 SETDB1Q15047 1291 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 RTN1Q16799 776 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 CXorf57Q6NSI4 855 aaKnown RBP12.11□□□□□ -0.47
LRP6-205ENST00000540527 BPHLQ86WA6 291 aaPredicted RBP12.11□□□□□ -0.47
LRP6-205ENST00000540527 PHC3Q8NDX5 983 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 SNX29Q8TEQ0 813 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 SLC26A8Q96RN1 970 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 CRBNQ96SW2 442 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 NPHS2Q9NP85 383 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 PRDM11Q9NQV5 511 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 SLC5A4Q9NY91 659 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 RABGEF1Q9UJ41 708 aa12.11□□□□□ -0.47
LRP6-205ENST00000540527 FOXD3Q9UJU5 478 aaPredicted RBP12.11□□□□□ -0.47
LRP6-205ENST00000540527 CRKP46108 304 aa12.1□□□□□ -0.47
LRP6-205ENST00000540527 HIRAP54198 1017 aaPredicted RBP12.1□□□□□ -0.47
LRP6-205ENST00000540527 MTFR1Q15390 333 aa12.1□□□□□ -0.47
LRP6-205ENST00000540527 CCDC93Q567U6 631 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 1138.3 ms