RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 MARCKSP29966 332 aaPredicted RBP16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 PLA2G4AP47712 749 aa16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 HSP90AA4PQ58FG1 418 aa16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 ESCO1Q5FWF5 840 aa16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 NFATC2IPQ8NCF5 419 aa16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 ANKRD24Q8TF21 1146 aa16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 NOL10Q9BSC4 688 aaKnown RBP16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 AGXT2Q9BYV1 514 aa16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 IMPACTQ9P2X3 320 aa16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 SLC3A2P08195 630 aaKnown RBP16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 HSP90AB3PQ58FF7 597 aa16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 ANKRD13DQ6ZTN6 518 aa16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 PAG1Q9NWQ8 432 aa16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 A0A087WZG4 1122 aa16.17■□□□□ 0.18
SCNN1A-215ENST00000540037 HMGB1P09429 215 aaKnown RBP16.17■□□□□ 0.18
SCNN1A-215ENST00000540037 LMBR1LQ6UX01 489 aa16.17■□□□□ 0.18
SCNN1A-215ENST00000540037 ZBTB9Q96C00 473 aa16.17■□□□□ 0.18
SCNN1A-215ENST00000540037 MROH7-TTC4A0A0A0MT08 1334 aa16.17■□□□□ 0.18
SCNN1A-215ENST00000540037 POLR3GO15318 223 aaPredicted RBP16.17■□□□□ 0.18
SCNN1A-215ENST00000540037 IRX5P78411 483 aaPredicted RBP16.17■□□□□ 0.18
SCNN1A-215ENST00000540037 FANCCQ00597 558 aa16.17■□□□□ 0.18
SCNN1A-215ENST00000540037 MAPK8IP2Q13387 824 aaPredicted RBP16.17■□□□□ 0.18
SCNN1A-215ENST00000540037 TAF3Q5VWG9 929 aa16.17■□□□□ 0.18
SCNN1A-215ENST00000540037 ZNF496Q96IT1 587 aaPredicted RBP16.17■□□□□ 0.18
SCNN1A-215ENST00000540037 SH3TC1Q8TE82 1336 aa16.17■□□□□ 0.18
SCNN1A-215ENST00000540037 M0R2C6 588 aa16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 SPTLC2O15270 562 aa16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 BMS1Q14692 1282 aaKnown RBP16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 CCDC150Q8NCX0 1101 aa16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 MAST3O60307 1309 aa16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 PALLDQ8WX93 1383 aa16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 VGLL3A8MV65 326 aa16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 WDHD1O75717 1129 aaPredicted RBP16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 UTP14AQ9BVJ6 771 aaKnown RBP16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 ABCC6O95255 1503 aa16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 PSDA5PKW4 1024 aaPredicted RBP16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 TMEM232C9JQI7 657 aa16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 KIF2AO00139 706 aaPredicted RBP16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 GCP02774 474 aa16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 PFKFB1P16118 471 aa16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 TRIM65Q6PJ69 517 aa16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 C8orf76Q96K31 380 aa16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 AIFM3Q96NN9 605 aa16.16■□□□□ 0.18
SCNN1A-215ENST00000540037 URI1O94763 535 aaPredicted RBP16.15■□□□□ 0.18
SCNN1A-215ENST00000540037 ETF1P62495 437 aaKnown RBP16.15■□□□□ 0.18
SCNN1A-215ENST00000540037 ZNF594Q96JF6 807 aaPredicted RBP16.15■□□□□ 0.18
SCNN1A-215ENST00000540037 ZCCHC17Q9NP64 241 aaKnown RBP16.15■□□□□ 0.18
SCNN1A-215ENST00000540037 A0A1W2PQ27 194 aa16.15■□□□□ 0.18
SCNN1A-215ENST00000540037 A0A1W2PQ64 194 aa16.15■□□□□ 0.18
SCNN1A-215ENST00000540037 A0A1W2PQD8 194 aa16.15■□□□□ 0.18
SCNN1A-215ENST00000540037 NLRP12P59046 1061 aa16.15■□□□□ 0.18
SCNN1A-215ENST00000540037 MYSM1Q5VVJ2 828 aa16.15■□□□□ 0.18
SCNN1A-215ENST00000540037 CARD6Q9BX69 1037 aa16.15■□□□□ 0.18
SCNN1A-215ENST00000540037 ZMYM1Q5SVZ6 1142 aa16.14■□□□□ 0.17
SCNN1A-215ENST00000540037 ATL3Q6DD88 541 aa16.14■□□□□ 0.17
SCNN1A-215ENST00000540037 LRP10Q7Z4F1 713 aa16.14■□□□□ 0.17
SCNN1A-215ENST00000540037 ZNF274Q96GC6 653 aaPredicted RBP16.14■□□□□ 0.17
SCNN1A-215ENST00000540037 DSCC1Q9BVC3 393 aa16.14■□□□□ 0.17
SCNN1A-215ENST00000540037 ORC3Q9UBD5 711 aaPredicted RBP16.14■□□□□ 0.17
SCNN1A-215ENST00000540037 AXDND1Q5T1B0 1012 aaPredicted RBP16.14■□□□□ 0.17
SCNN1A-215ENST00000540037 OSBP2Q969R2 916 aa16.14■□□□□ 0.17
SCNN1A-215ENST00000540037 DENND2AQ9ULE3 1009 aa16.14■□□□□ 0.17
SCNN1A-215ENST00000540037 CCDC66A2RUB6 948 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 RABL6Q3YEC7 729 aaPredicted RBP16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 LRRC24Q50LG9 513 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 ATG9AQ7Z3C6 839 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 UBXN4Q92575 508 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 C5P01031 1676 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 PNOCQ13519 176 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 ARHGEF25Q86VW2 580 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 NKX2-3Q8TAU0 364 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 BPIFA3Q9BQP9 254 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 HPS5Q9UPZ3 1129 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 KLF18A0A0U1RQI7 1052 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 FOXP2O15409 715 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 ZRANB2O95218 330 aaKnown RBP eCLIP16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 CYP2C19P33261 490 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 UBASH3AP57075 661 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 FBXO18Q8NFZ0 1043 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 NEK11Q8NG66 645 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 TIGD1Q96MW7 591 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 HELLSQ9NRZ9 838 aa16.13■□□□□ 0.17
SCNN1A-215ENST00000540037 GOLGA8BA8MQT2 603 aa16.12■□□□□ 0.17
SCNN1A-215ENST00000540037 SERPINC1P01008 464 aa16.12■□□□□ 0.17
SCNN1A-215ENST00000540037 RXRAP19793 462 aa16.12■□□□□ 0.17
SCNN1A-215ENST00000540037 HNRNPH2P55795 449 aaKnown RBP16.12■□□□□ 0.17
SCNN1A-215ENST00000540037 CFAP100Q494V2 611 aa16.12■□□□□ 0.17
SCNN1A-215ENST00000540037 REXO1L1PQ8IX06 675 aa16.12■□□□□ 0.17
SCNN1A-215ENST00000540037 KCNH5Q8NCM2 988 aa16.12■□□□□ 0.17
SCNN1A-215ENST00000540037 KCNG4Q8TDN1 519 aa16.12■□□□□ 0.17
SCNN1A-215ENST00000540037 POLR3EQ9NVU0 708 aa16.12■□□□□ 0.17
SCNN1A-215ENST00000540037 SASH3O75995 380 aa16.12■□□□□ 0.17
SCNN1A-215ENST00000540037 FKBP4Q02790 459 aaKnown RBP eCLIP16.12■□□□□ 0.17
SCNN1A-215ENST00000540037 USP54Q70EL1 1684 aa16.12■□□□□ 0.17
SCNN1A-215ENST00000540037 ST5P78524 1137 aa16.11■□□□□ 0.17
SCNN1A-215ENST00000540037 ANO1Q5XXA6 986 aa16.11■□□□□ 0.17
SCNN1A-215ENST00000540037 MNS1Q8NEH6 495 aa16.11■□□□□ 0.17
SCNN1A-215ENST00000540037 CLIC6Q96NY7 704 aa16.11■□□□□ 0.17
SCNN1A-215ENST00000540037 PARP3Q9Y6F1 533 aa16.11■□□□□ 0.17
SCNN1A-215ENST00000540037 RFX7Q2KHR2 1363 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms