RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-210	ENST00000539303	GPN3	Q9UHW5	284 aa	Predicted RBP	4.96	□□□□□ -1.62
SNHG1-210	ENST00000539303	PPM1H	Q9ULR3	514 aa		4.96	□□□□□ -1.62
SNHG1-210	ENST00000539303	SOX13	Q9UN79	622 aa		4.96	□□□□□ -1.62
SNHG1-210	ENST00000539303	STARD13	Q9Y3M8	1113 aa		4.96	□□□□□ -1.62
SNHG1-210	ENST00000539303	ADARB2-AS1	A8MUL3	147 aa		4.95	□□□□□ -1.62
SNHG1-210	ENST00000539303	SMNDC1	O75940	238 aa	Known RBP eCLIP	4.95	□□□□□ -1.62	3e-14	■■■■■ 31.4
SNHG1-210	ENST00000539303	EPHA1	P21709	976 aa		4.95	□□□□□ -1.62
SNHG1-210	ENST00000539303	LIG3	P49916	1009 aa		4.95	□□□□□ -1.62
SNHG1-210	ENST00000539303	FBXL19	Q6PCT2	694 aa		4.95	□□□□□ -1.62
SNHG1-210	ENST00000539303	MICALL1	Q8N3F8	863 aa		4.95	□□□□□ -1.62
SNHG1-210	ENST00000539303	PHC3	Q8NDX5	983 aa		4.95	□□□□□ -1.62
SNHG1-210	ENST00000539303	BSND	Q8WZ55	320 aa		4.95	□□□□□ -1.62
SNHG1-210	ENST00000539303	DHX38	Q92620	1227 aa	Known RBP	4.95	□□□□□ -1.62
SNHG1-210	ENST00000539303	TANGO6	Q9C0B7	1094 aa		4.95	□□□□□ -1.62
SNHG1-210	ENST00000539303	RBSN	Q9H1K0	784 aa		4.95	□□□□□ -1.62
SNHG1-210	ENST00000539303	AVEN	Q9NQS1	362 aa	Predicted RBP	4.95	□□□□□ -1.62
SNHG1-210	ENST00000539303	ELOA3C	A0A087WX78	387 aa	Predicted RBP	4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	ELOA3D	A6NLF2	546 aa	Predicted RBP	4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	ALB	P02768	609 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	PF4	P02776	101 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	VSIG8	P0DPA2	414 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	TFE3	P19532	575 aa	Predicted RBP	4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	GART	P22102	1010 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	MAP2K3	P46734	347 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	PCDH1	Q08174	1060 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	GRIK5	Q16478	980 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	ELOA3B	Q3SY89	546 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	PCNX4	Q63HM2	1172 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	ZNF787	Q6DD87	383 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	TTBK2	Q6IQ55	1244 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	MPRIP	Q6WCQ1	1025 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	SV2B	Q7L1I2	683 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	SLC43A3	Q8NBI5	491 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	ELOA3	Q8NG57	546 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	ANKRD24	Q8TF21	1146 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	ACD	Q96AP0	544 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	EAF1	Q96JC9	268 aa	Predicted RBP	4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	TMEM74	Q96NL1	305 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	SPON2	Q9BUD6	331 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	RSRP1	Q9BUV0	290 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	CLEC4M	Q9H2X3	399 aa	Predicted RBP	4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	PCDHB5	Q9Y5E4	795 aa		4.94	□□□□□ -1.62
SNHG1-210	ENST00000539303	TERT	O14746	1132 aa	Known RBP	4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	ESRRA	P11474	423 aa	Predicted RBP	4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	PTPRA	P18433	802 aa		4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	EIF4A3	P38919	411 aa	Known RBP	4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	GJA8	P48165	433 aa		4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	PCSK7	Q16549	785 aa		4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	MCF2L2	Q86YR7	1114 aa		4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	RELL1	Q8IUW5	271 aa		4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	KIAA0825	Q8IV33	1275 aa		4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	GRIN3A	Q8TCU5	1115 aa		4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	ZNF296	Q8WUU4	475 aa	Predicted RBP	4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	GPRASP2	Q96D09	838 aa		4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	DNAJC2	Q99543	621 aa	Known RBP	4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	ADAM19	Q9H013	955 aa		4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	JPH1	Q9HDC5	661 aa	Predicted RBP	4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	UBP1	Q9NZI7	540 aa		4.93	□□□□□ -1.62
SNHG1-210	ENST00000539303	SHISA8	B8ZZ34	492 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	SOX1	O00570	391 aa	Predicted RBP	4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	RGS9	O75916	674 aa	Predicted RBP	4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	ADAMTS2	O95450	1211 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	ECEL1	O95672	775 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	B3GALT4	O96024	378 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	FGR	P09769	529 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	EPX	P11678	715 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	BMP6	P22004	513 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	CRK	P46108	304 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	BAG6	P46379	1132 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	NFX1	Q12986	1120 aa	Known RBP	4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	CAMK2G	Q13555	558 aa	Predicted RBP	4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	SEPT6	Q14141	434 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	BNC2	Q6ZN30	1099 aa	Predicted RBP	4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	AGMO	Q6ZNB7	445 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	C20orf204	Q6ZNR8	217 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	SLCO4C1	Q6ZQN7	724 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	GOLM1	Q8NBJ4	401 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	FBXO27	Q8NI29	283 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	GML	Q99445	158 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	CEP44	Q9C0F1	390 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	TMEM39A	Q9NV64	488 aa		4.92	□□□□□ -1.62
SNHG1-210	ENST00000539303	TLR3	O15455	904 aa	Known RBP	4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	F13A1	P00488	732 aa		4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	ATF4	P18848	351 aa	Predicted RBP	4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	CDC27	P30260	824 aa		4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	AFF1	P51825	1210 aa	Known RBP	4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	ARID5A	Q03989	594 aa		4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	PTPN11	Q06124	597 aa	Predicted RBP	4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	SF3A1	Q15459	793 aa	Known RBP	4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	SULF2	Q8IWU5	870 aa		4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	IL22RA1	Q8N6P7	574 aa		4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	GOLGA6L1	Q8N7Z2	621 aa		4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	SLC7A3	Q8WY07	619 aa		4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	UBXN4	Q92575	508 aa		4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	CARD10	Q9BWT7	1032 aa		4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	FRRS1L	Q9P0K9	344 aa		4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	NSFL1C	Q9UNZ2	370 aa	Known RBP	4.91	□□□□□ -1.62
SNHG1-210	ENST00000539303	LINC01387	J3KSC0	135 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 13 ms