RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 GREM2Q9H772 168 aa6.81□□□□□ -1.32
CHD4-205ENST00000536301 BABAM1Q9NWV8 329 aa6.81□□□□□ -1.32
CHD4-205ENST00000536301 TRIM35Q9UPQ4 493 aa6.81□□□□□ -1.32
CHD4-205ENST00000536301 JAG2Q9Y219 1238 aa6.81□□□□□ -1.32
CHD4-205ENST00000536301 DOCK3Q8IZD9 2030 aa6.81□□□□□ -1.32
CHD4-205ENST00000536301 MYO3BQ8WXR4 1341 aa6.8□□□□□ -1.32
CHD4-205ENST00000536301 IRS2Q9Y4H2 1338 aa6.8□□□□□ -1.32
CHD4-205ENST00000536301 CTSWP56202 376 aa6.8□□□□□ -1.32
CHD4-205ENST00000536301 TAF1CQ15572 869 aaPredicted RBP6.8□□□□□ -1.32
CHD4-205ENST00000536301 CFAP100Q494V2 611 aa6.8□□□□□ -1.32
CHD4-205ENST00000536301 DUSP27Q5VZP5 1158 aa6.8□□□□□ -1.32
CHD4-205ENST00000536301 TTLL11Q8NHH1 800 aa6.8□□□□□ -1.32
CHD4-205ENST00000536301 CCER1Q8TC90 406 aaPredicted RBP6.8□□□□□ -1.32
CHD4-205ENST00000536301 DPF3Q92784 378 aa6.8□□□□□ -1.32
CHD4-205ENST00000536301 PRMT6Q96LA8 375 aaPredicted RBP6.8□□□□□ -1.32
CHD4-205ENST00000536301 COA1Q9GZY4 146 aa6.8□□□□□ -1.32
CHD4-205ENST00000536301 VEZTQ9HBM0 779 aa6.8□□□□□ -1.32
CHD4-205ENST00000536301 DBF4Q9UBU7 674 aaPredicted RBP6.8□□□□□ -1.32
CHD4-205ENST00000536301 ZNF804BA4D1E1 1349 aa6.79□□□□□ -1.32
CHD4-205ENST00000536301 CCL15-CCL14A0A0B4J2E2 113 aa6.79□□□□□ -1.32
CHD4-205ENST00000536301 SPDYE2BA6NHP3 402 aa6.79□□□□□ -1.32
CHD4-205ENST00000536301 PPP1R12BO60237 982 aaPredicted RBP6.79□□□□□ -1.32
CHD4-205ENST00000536301 IGKV5-2P06315 115 aa6.79□□□□□ -1.32
CHD4-205ENST00000536301 SPDYE6P0CI01 402 aa6.79□□□□□ -1.32
CHD4-205ENST00000536301 RASA3Q14644 834 aa6.79□□□□□ -1.32
CHD4-205ENST00000536301 DLGAP5Q15398 846 aa6.79□□□□□ -1.32
CHD4-205ENST00000536301 CCL15Q16663 113 aa6.79□□□□□ -1.32
CHD4-205ENST00000536301 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.79□□□□□ -1.32
CHD4-205ENST00000536301 UBE2Q1Q7Z7E8 422 aa6.79□□□□□ -1.32
CHD4-205ENST00000536301 CCDC191Q8NCU4 936 aa6.79□□□□□ -1.32
CHD4-205ENST00000536301 CD209Q9NNX6 404 aa6.79□□□□□ -1.32
CHD4-205ENST00000536301 BSDC1Q9NW68 430 aaPredicted RBP6.79□□□□□ -1.32
CHD4-205ENST00000536301 HYPKQ9NX55 129 aa6.79□□□□□ -1.32
CHD4-205ENST00000536301 CWC25Q9NXE8 425 aaPredicted RBP6.79□□□□□ -1.32
CHD4-205ENST00000536301 ARAP2Q8WZ64 1704 aa6.79□□□□□ -1.32
CHD4-205ENST00000536301 VCANP13611 3396 aa6.78□□□□□ -1.32
CHD4-205ENST00000536301 ELL2O00472 640 aaPredicted RBP6.78□□□□□ -1.32
CHD4-205ENST00000536301 ZBTB7BO15156 539 aaPredicted RBP6.78□□□□□ -1.32
CHD4-205ENST00000536301 GOLGA2Q08379 1002 aa6.78□□□□□ -1.32
CHD4-205ENST00000536301 VGLL4Q14135 290 aa6.78□□□□□ -1.32
CHD4-205ENST00000536301 OTUD7BQ6GQQ9 843 aa6.78□□□□□ -1.32
CHD4-205ENST00000536301 Q7L0L9 218 aa6.78□□□□□ -1.32
CHD4-205ENST00000536301 NBPF11Q86T75 865 aa6.78□□□□□ -1.32
CHD4-205ENST00000536301 ANKRD13AQ8IZ07 590 aa6.78□□□□□ -1.32
CHD4-205ENST00000536301 MTMR14Q8NCE2 650 aa6.78□□□□□ -1.32
CHD4-205ENST00000536301 HELBQ8NG08 1087 aaPredicted RBP6.78□□□□□ -1.32
CHD4-205ENST00000536301 TEPSINQ96N21 525 aa6.78□□□□□ -1.32
CHD4-205ENST00000536301 CDC5LQ99459 802 aaKnown RBP6.78□□□□□ -1.32
CHD4-205ENST00000536301 METTL22Q9BUU2 404 aaPredicted RBP6.78□□□□□ -1.32
CHD4-205ENST00000536301 ZFYVE28Q9HCC9 887 aa6.78□□□□□ -1.32
CHD4-205ENST00000536301 MBIPQ9NS73 344 aa6.78□□□□□ -1.32
CHD4-205ENST00000536301 MGAMO43451 1857 aa6.77□□□□□ -1.33
CHD4-205ENST00000536301 BTBD19C9JJ37 291 aa6.77□□□□□ -1.33
CHD4-205ENST00000536301 TAF5LO75529 589 aa6.77□□□□□ -1.33
CHD4-205ENST00000536301 HOXB7P09629 217 aa6.77□□□□□ -1.33
CHD4-205ENST00000536301 IREB2P48200 963 aaKnown RBP6.77□□□□□ -1.33
CHD4-205ENST00000536301 LACTBP83111 547 aaPredicted RBP6.77□□□□□ -1.33
CHD4-205ENST00000536301 CWF19L2Q2TBE0 894 aaKnown RBP6.77□□□□□ -1.33
CHD4-205ENST00000536301 STAP2Q9UGK3 403 aa6.77□□□□□ -1.33
CHD4-205ENST00000536301 CPA4Q9UI42 421 aa6.77□□□□□ -1.33
CHD4-205ENST00000536301 LEMD3Q9Y2U8 911 aa6.77□□□□□ -1.33
CHD4-205ENST00000536301 PPP2R3BQ9Y5P8 575 aa6.77□□□□□ -1.33
CHD4-205ENST00000536301 TLR2O60603 784 aa6.76□□□□□ -1.33
CHD4-205ENST00000536301 CCL5P13501 91 aa6.76□□□□□ -1.33
CHD4-205ENST00000536301 OSBPP22059 807 aa6.76□□□□□ -1.33
CHD4-205ENST00000536301 CHRNDQ07001 517 aa6.76□□□□□ -1.33
CHD4-205ENST00000536301 LMOD3Q0VAK6 560 aa6.76□□□□□ -1.33
CHD4-205ENST00000536301 GRIK5Q16478 980 aa6.76□□□□□ -1.33
CHD4-205ENST00000536301 SUPT20HL1Q3ZLR7 823 aa6.76□□□□□ -1.33
CHD4-205ENST00000536301 C8orf58Q8NAV2 365 aa6.76□□□□□ -1.33
CHD4-205ENST00000536301 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.76□□□□□ -1.33
CHD4-205ENST00000536301 TRIM47Q96LD4 638 aa6.76□□□□□ -1.33
CHD4-205ENST00000536301 COL25A1Q9BXS0 654 aaPredicted RBP6.76□□□□□ -1.33
CHD4-205ENST00000536301 TMEM39BQ9GZU3 492 aa6.76□□□□□ -1.33
CHD4-205ENST00000536301 TDRD3Q9H7E2 651 aaKnown RBP6.76□□□□□ -1.33
CHD4-205ENST00000536301 ZNF70Q9UC06 446 aaPredicted RBP6.76□□□□□ -1.33
CHD4-205ENST00000536301 MAP3K2Q9Y2U5 619 aa6.76□□□□□ -1.33
CHD4-205ENST00000536301 SNCAIPQ9Y6H5 919 aa6.76□□□□□ -1.33
CHD4-205ENST00000536301 SPTBN5Q9NRC6 3674 aaKnown RBP6.75□□□□□ -1.33
CHD4-205ENST00000536301 EYSQ5T1H1 3165 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 PRUNE2Q8WUY3 3088 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 UNCXA6NJT0 531 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 NEURL1BA8MQ27 555 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 TCP10L2B9ZVM9 353 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 ZNF853P0CG23 659 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 ITGA6P23229 1130 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 IGHMBP2P38935 993 aaKnown RBP6.75□□□□□ -1.33
CHD4-205ENST00000536301 PSMC4P43686 418 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 GJA8P48165 433 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 MNX1P50219 401 aaPredicted RBP6.75□□□□□ -1.33
CHD4-205ENST00000536301 RBM5P52756 815 aaKnown RBP eCLIP6.75□□□□□ -1.33
CHD4-205ENST00000536301 CACNB3P54284 484 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 CASP7P55210 303 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 MAP3K9P80192 1104 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 SPDYE2Q495Y8 402 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 C17orf99Q6UX52 265 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 G2E3Q7L622 706 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 UBE3BQ7Z3V4 1068 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 TSPYL6Q8N831 410 aa6.75□□□□□ -1.33
CHD4-205ENST00000536301 UNC93B1Q9H1C4 597 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms