RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 TMEM88BA6NKF7 163 aa16.56■□□□□ 0.24
CAPN1-227ENST00000533909 F8W031 263 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-227ENST00000533909 EGFRP00533 1210 aa16.56■□□□□ 0.24
CAPN1-227ENST00000533909 BCAMP50895 628 aa16.56■□□□□ 0.24
CAPN1-227ENST00000533909 ATP8B2P98198 1209 aa16.56■□□□□ 0.24
CAPN1-227ENST00000533909 SCARF1Q14162 830 aa16.56■□□□□ 0.24
CAPN1-227ENST00000533909 CDC37L1Q7L3B6 337 aa16.56■□□□□ 0.24
CAPN1-227ENST00000533909 FBXO33Q7Z6M2 555 aa16.56■□□□□ 0.24
CAPN1-227ENST00000533909 SULF1Q8IWU6 871 aa16.56■□□□□ 0.24
CAPN1-227ENST00000533909 CREBZFQ9NS37 354 aa16.56■□□□□ 0.24
CAPN1-227ENST00000533909 FAM205AQ6ZU69 1335 aa16.55■□□□□ 0.24
CAPN1-227ENST00000533909 TRAF5O00463 557 aa16.55■□□□□ 0.24
CAPN1-227ENST00000533909 FGFR2P21802 821 aa16.55■□□□□ 0.24
CAPN1-227ENST00000533909 FKBP1AP62942 108 aaKnown RBP16.55■□□□□ 0.24
CAPN1-227ENST00000533909 TFCP2Q12800 502 aa16.55■□□□□ 0.24
CAPN1-227ENST00000533909 PDE3AQ14432 1141 aa16.55■□□□□ 0.24
CAPN1-227ENST00000533909 MFSD14BQ5SR56 506 aa16.55■□□□□ 0.24
CAPN1-227ENST00000533909 KRT26Q7Z3Y9 468 aa16.55■□□□□ 0.24
CAPN1-227ENST00000533909 GLIS2Q9BZE0 524 aaPredicted RBP16.55■□□□□ 0.24
CAPN1-227ENST00000533909 GGA3Q9NZ52 723 aa16.55■□□□□ 0.24
CAPN1-227ENST00000533909 PGAP2Q9UHJ9 254 aa16.55■□□□□ 0.24
CAPN1-227ENST00000533909 CEP350Q5VT06 3117 aa16.55■□□□□ 0.24
CAPN1-227ENST00000533909 SURF6O75683 361 aaKnown RBP16.54■□□□□ 0.24
CAPN1-227ENST00000533909 RBM5P52756 815 aaKnown RBP eCLIP16.54■□□□□ 0.24
CAPN1-227ENST00000533909 GORABQ5T7V8 394 aa16.54■□□□□ 0.24
CAPN1-227ENST00000533909 USP48Q86UV5 1035 aa16.54■□□□□ 0.24
CAPN1-227ENST00000533909 TBC1D22AQ8WUA7 517 aa16.54■□□□□ 0.24
CAPN1-227ENST00000533909 NEUROD6Q96NK8 337 aa16.54■□□□□ 0.24
CAPN1-227ENST00000533909 ZNF408Q9H9D4 720 aa16.54■□□□□ 0.24
CAPN1-227ENST00000533909 ABT1Q9ULW3 272 aaKnown RBP16.54■□□□□ 0.24
CAPN1-227ENST00000533909 POLA2Q14181 598 aa16.53■□□□□ 0.24
CAPN1-227ENST00000533909 DLGAP5Q15398 846 aa16.53■□□□□ 0.24
CAPN1-227ENST00000533909 ANGEL2Q5VTE6 544 aaKnown RBP16.53■□□□□ 0.24
CAPN1-227ENST00000533909 CERS5Q8N5B7 392 aa16.53■□□□□ 0.24
CAPN1-227ENST00000533909 SSH3Q8TE77 659 aa16.53■□□□□ 0.24
CAPN1-227ENST00000533909 MYO1BO43795 1136 aa16.52■□□□□ 0.24
CAPN1-227ENST00000533909 HMMRO75330 724 aa16.52■□□□□ 0.24
CAPN1-227ENST00000533909 CELF2O95319 508 aaKnown RBP16.52■□□□□ 0.24
CAPN1-227ENST00000533909 CEP85Q6P2H3 762 aa16.52■□□□□ 0.24
CAPN1-227ENST00000533909 TTF2Q9UNY4 1162 aaKnown RBP16.52■□□□□ 0.24
CAPN1-227ENST00000533909 A0A1B0GUL7 405 aa16.51■□□□□ 0.23
CAPN1-227ENST00000533909 NBPF9Q3BBW0 867 aa16.51■□□□□ 0.23
CAPN1-227ENST00000533909 C20orf194Q5TEA3 1177 aa16.51■□□□□ 0.23
CAPN1-227ENST00000533909 PAXIP1Q6ZW49 1069 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-227ENST00000533909 WDR66Q8TBY9 1149 aa16.51■□□□□ 0.23
CAPN1-227ENST00000533909 ASTN2O75129 1339 aaPredicted RBP16.5■□□□□ 0.23
CAPN1-227ENST00000533909 ADM5C9JUS6 153 aa16.5■□□□□ 0.23
CAPN1-227ENST00000533909 WNT10BO00744 389 aa16.5■□□□□ 0.23
CAPN1-227ENST00000533909 TIMM10P62072 90 aa16.5■□□□□ 0.23
CAPN1-227ENST00000533909 KLRG1Q96E93 195 aa16.5■□□□□ 0.23
CAPN1-227ENST00000533909 MKRN1Q9UHC7 482 aaKnown RBP16.5■□□□□ 0.23
CAPN1-227ENST00000533909 PITPNM2Q9BZ72 1349 aa16.49■□□□□ 0.23
CAPN1-227ENST00000533909 SEMA3EO15041 775 aa16.49■□□□□ 0.23
CAPN1-227ENST00000533909 ADORA1P30542 326 aa16.49■□□□□ 0.23
CAPN1-227ENST00000533909 FMR1Q06787 632 aaKnown RBP eCLIP16.49■□□□□ 0.23
CAPN1-227ENST00000533909 CFAP100Q494V2 611 aa16.49■□□□□ 0.23
CAPN1-227ENST00000533909 HSP90AB4PQ58FF6 505 aa16.49■□□□□ 0.23
CAPN1-227ENST00000533909 RPAP2Q8IXW5 612 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-227ENST00000533909 XAGE2Q96GT9 111 aa16.49■□□□□ 0.23
CAPN1-227ENST00000533909 ZBTB40Q9NUA8 1239 aa16.49■□□□□ 0.23
CAPN1-227ENST00000533909 SERPINA10Q9UK55 444 aa16.49■□□□□ 0.23
CAPN1-227ENST00000533909 DENND2AQ9ULE3 1009 aa16.49■□□□□ 0.23
CAPN1-227ENST00000533909 MAST3O60307 1309 aa16.48■□□□□ 0.23
CAPN1-227ENST00000533909 PHKA1P46020 1223 aa16.48■□□□□ 0.23
CAPN1-227ENST00000533909 RRP1P56182 461 aaKnown RBP16.48■□□□□ 0.23
CAPN1-227ENST00000533909 CCDC102BQ68D86 513 aa16.48■□□□□ 0.23
CAPN1-227ENST00000533909 ERC1Q8IUD2 1116 aa16.48■□□□□ 0.23
CAPN1-227ENST00000533909 APOBEC3FQ8IUX4 373 aaKnown RBP16.48■□□□□ 0.23
CAPN1-227ENST00000533909 DNAJC5GQ8N7S2 189 aa16.48■□□□□ 0.23
CAPN1-227ENST00000533909 ZNF646O15015 1829 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-227ENST00000533909 MTMR14Q8NCE2 650 aa16.47■□□□□ 0.23
CAPN1-227ENST00000533909 VEZTQ9HBM0 779 aa16.47■□□□□ 0.23
CAPN1-227ENST00000533909 EXOC6BQ9Y2D4 811 aa16.47■□□□□ 0.23
CAPN1-227ENST00000533909 NOP58Q9Y2X3 529 aaKnown RBP16.47■□□□□ 0.23
CAPN1-227ENST00000533909 SUGT1Q9Y2Z0 365 aa16.47■□□□□ 0.23
CAPN1-227ENST00000533909 SPDYE2BA6NHP3 402 aa16.46■□□□□ 0.23
CAPN1-227ENST00000533909 SPDYE6P0CI01 402 aa16.46■□□□□ 0.23
CAPN1-227ENST00000533909 NF2P35240 595 aa16.46■□□□□ 0.23
CAPN1-227ENST00000533909 CRKP46108 304 aa16.46■□□□□ 0.23
CAPN1-227ENST00000533909 DEFB115Q30KQ5 88 aa16.46■□□□□ 0.23
CAPN1-227ENST00000533909 TNNI3KQ59H18 835 aa16.46■□□□□ 0.23
CAPN1-227ENST00000533909 CST9Q5W186 159 aa16.46■□□□□ 0.23
CAPN1-227ENST00000533909 ZGPATQ8N5A5 531 aaKnown RBP16.46■□□□□ 0.23
CAPN1-227ENST00000533909 C2orf69Q8N8R5 385 aa16.46■□□□□ 0.23
CAPN1-227ENST00000533909 TEKT1Q969V4 418 aa16.46■□□□□ 0.23
CAPN1-227ENST00000533909 CDCA5Q96FF9 252 aa16.46■□□□□ 0.23
CAPN1-227ENST00000533909 GPR108Q9NPR9 543 aa16.46■□□□□ 0.23
CAPN1-227ENST00000533909 FPGT-TNNI3KV9GXZ4 949 aa16.46■□□□□ 0.23
CAPN1-227ENST00000533909 TRPM7Q96QT4 1865 aa16.46■□□□□ 0.22
CAPN1-227ENST00000533909 MYH13Q9UKX3 1938 aa16.45■□□□□ 0.22
CAPN1-227ENST00000533909 CLRN2A0PK11 232 aa16.45■□□□□ 0.22
CAPN1-227ENST00000533909 APBB1O00213 710 aa16.45■□□□□ 0.22
CAPN1-227ENST00000533909 LDHBP07195 334 aaKnown RBP16.45■□□□□ 0.22
CAPN1-227ENST00000533909 GRM1Q13255 1194 aa16.45■□□□□ 0.22
CAPN1-227ENST00000533909 CCDC158Q5M9N0 1113 aa16.45■□□□□ 0.22
CAPN1-227ENST00000533909 TTC39AQ5SRH9 613 aa16.45■□□□□ 0.22
CAPN1-227ENST00000533909 DLK2Q6UY11 383 aa16.45■□□□□ 0.22
CAPN1-227ENST00000533909 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
CAPN1-227ENST00000533909 GBA2Q9HCG7 927 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-227ENST00000533909 SCAF8Q9UPN6 1271 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms