RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 PAPPA2Q9BXP8 1791 aa16.64■□□□□ 0.25
COPB1-209ENST00000533096 USP2O75604 605 aaPredicted RBP16.64■□□□□ 0.25
COPB1-209ENST00000533096 CSF1RP07333 972 aa16.64■□□□□ 0.25
COPB1-209ENST00000533096 FKBP5Q13451 457 aaPredicted RBP16.64■□□□□ 0.25
COPB1-209ENST00000533096 OTUD7BQ6GQQ9 843 aa16.64■□□□□ 0.25
COPB1-209ENST00000533096 CFHR5Q9BXR6 569 aa16.64■□□□□ 0.25
COPB1-209ENST00000533096 MYH16Q9H6N6 1097 aa16.64■□□□□ 0.25
COPB1-209ENST00000533096 EN2P19622 333 aaPredicted RBP16.63■□□□□ 0.25
COPB1-209ENST00000533096 IREB2P48200 963 aaKnown RBP16.63■□□□□ 0.25
COPB1-209ENST00000533096 CRHR2Q13324 411 aa16.63■□□□□ 0.25
COPB1-209ENST00000533096 IFIT5Q13325 482 aaKnown RBP16.63■□□□□ 0.25
COPB1-209ENST00000533096 RASA3Q14644 834 aa16.63■□□□□ 0.25
COPB1-209ENST00000533096 INTS3Q68E01 1043 aaKnown RBP16.63■□□□□ 0.25
COPB1-209ENST00000533096 PTPN22Q9Y2R2 807 aa16.63■□□□□ 0.25
COPB1-209ENST00000533096 SALL2Q9Y467 1007 aaPredicted RBP16.63■□□□□ 0.25
COPB1-209ENST00000533096 TNRC18O15417 2968 aaPredicted RBP16.62■□□□□ 0.25
COPB1-209ENST00000533096 MYCP01106 439 aaPredicted RBP16.62■□□□□ 0.25
COPB1-209ENST00000533096 ZNF804AQ7Z570 1209 aa16.62■□□□□ 0.25
COPB1-209ENST00000533096 DNAAF4Q8WXU2 420 aa16.62■□□□□ 0.25
COPB1-209ENST00000533096 GCC1Q96CN9 775 aa16.62■□□□□ 0.25
COPB1-209ENST00000533096 ERO1AQ96HE7 468 aa16.62■□□□□ 0.25
COPB1-209ENST00000533096 ZNF594Q96JF6 807 aaPredicted RBP16.62■□□□□ 0.25
COPB1-209ENST00000533096 PLA2G12BQ9BX93 195 aa16.62■□□□□ 0.25
COPB1-209ENST00000533096 ELP3Q9H9T3 547 aa16.62■□□□□ 0.25
COPB1-209ENST00000533096 EFCC1Q9HA90 598 aa16.62■□□□□ 0.25
COPB1-209ENST00000533096 AOX1Q06278 1338 aa16.62■□□□□ 0.25
COPB1-209ENST00000533096 SPDYE2BA6NHP3 402 aa16.61■□□□□ 0.25
COPB1-209ENST00000533096 SPDYE6P0CI01 402 aa16.61■□□□□ 0.25
COPB1-209ENST00000533096 ZBTB48P10074 688 aaPredicted RBP16.61■□□□□ 0.25
COPB1-209ENST00000533096 CASP7P55210 303 aa16.61■□□□□ 0.25
COPB1-209ENST00000533096 FLIIQ13045 1269 aa16.61■□□□□ 0.25
COPB1-209ENST00000533096 TAF7LQ5H9L4 462 aa16.61■□□□□ 0.25
COPB1-209ENST00000533096 HABP4Q5JVS0 413 aaKnown RBP16.61■□□□□ 0.25
COPB1-209ENST00000533096 PTPN18Q99952 460 aa16.61■□□□□ 0.25
COPB1-209ENST00000533096 AKAP11Q9UKA4 1901 aa16.6■□□□□ 0.25
COPB1-209ENST00000533096 GJA5P36382 358 aa16.6■□□□□ 0.25
COPB1-209ENST00000533096 SP3Q02447 781 aa16.6■□□□□ 0.25
COPB1-209ENST00000533096 MAP3K11Q16584 847 aa16.6■□□□□ 0.25
COPB1-209ENST00000533096 ANKRD13AQ8IZ07 590 aa16.6■□□□□ 0.25
COPB1-209ENST00000533096 MTMR14Q8NCE2 650 aa16.6■□□□□ 0.25
COPB1-209ENST00000533096 LINS1Q8NG48 757 aa16.6■□□□□ 0.25
COPB1-209ENST00000533096 TMEM106CQ9BVX2 250 aa16.6■□□□□ 0.25
COPB1-209ENST00000533096 TDRD3Q9H7E2 651 aaKnown RBP16.6■□□□□ 0.25
COPB1-209ENST00000533096 CNNM1Q9NRU3 951 aa16.6■□□□□ 0.25
COPB1-209ENST00000533096 F6X3S4 739 aa16.59■□□□□ 0.25
COPB1-209ENST00000533096 FOXO4P98177 505 aa16.59■□□□□ 0.25
COPB1-209ENST00000533096 LMBR1LQ6UX01 489 aa16.59■□□□□ 0.25
COPB1-209ENST00000533096 LDHAL6AQ6ZMR3 332 aa16.59■□□□□ 0.25
COPB1-209ENST00000533096 WWC1Q8IX03 1113 aa16.59■□□□□ 0.25
COPB1-209ENST00000533096 OPTNQ96CV9 577 aa16.59■□□□□ 0.25
COPB1-209ENST00000533096 PPP2R3BQ9Y5P8 575 aa16.59■□□□□ 0.25
COPB1-209ENST00000533096 TCP10L2B9ZVM9 353 aa16.58■□□□□ 0.24
COPB1-209ENST00000533096 ECM2O94769 699 aaPredicted RBP16.58■□□□□ 0.24
COPB1-209ENST00000533096 IL1R1P14778 569 aa16.58■□□□□ 0.24
COPB1-209ENST00000533096 CCDC184Q52MB2 194 aa16.58■□□□□ 0.24
COPB1-209ENST00000533096 ZNF70Q9UC06 446 aaPredicted RBP16.58■□□□□ 0.24
COPB1-209ENST00000533096 TTF2Q9UNY4 1162 aaKnown RBP16.58■□□□□ 0.24
COPB1-209ENST00000533096 CCDC57Q2TAC2 916 aa16.57■□□□□ 0.24
COPB1-209ENST00000533096 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
COPB1-209ENST00000533096 GYG1P46976 350 aa16.56■□□□□ 0.24
COPB1-209ENST00000533096 CAP1Q01518 475 aa16.56■□□□□ 0.24
COPB1-209ENST00000533096 SLC4A8Q2Y0W8 1093 aa16.56■□□□□ 0.24
COPB1-209ENST00000533096 EPHA10Q5JZY3 1008 aa16.56■□□□□ 0.24
COPB1-209ENST00000533096 C15orf52Q6ZUT6 534 aaKnown RBP16.56■□□□□ 0.24
COPB1-209ENST00000533096 IRS2Q9Y4H2 1338 aa16.55■□□□□ 0.24
COPB1-209ENST00000533096 UNCXA6NJT0 531 aa16.55■□□□□ 0.24
COPB1-209ENST00000533096 HIBADHP31937 336 aaKnown RBP16.55■□□□□ 0.24
COPB1-209ENST00000533096 MAP3K9P80192 1104 aa16.55■□□□□ 0.24
COPB1-209ENST00000533096 MFSD14BQ5SR56 506 aa16.55■□□□□ 0.24
COPB1-209ENST00000533096 CDAN1Q8IWY9 1227 aa16.55■□□□□ 0.24
COPB1-209ENST00000533096 ZFYVE28Q9HCC9 887 aa16.55■□□□□ 0.24
COPB1-209ENST00000533096 CCL15-CCL14A0A0B4J2E2 113 aa16.54■□□□□ 0.24
COPB1-209ENST00000533096 TESPA1A2RU30 521 aaPredicted RBP16.54■□□□□ 0.24
COPB1-209ENST00000533096 VAMP4O75379 141 aa16.54■□□□□ 0.24
COPB1-209ENST00000533096 FKBP1AP62942 108 aaKnown RBP16.54■□□□□ 0.24
COPB1-209ENST00000533096 EXOSC9Q06265 439 aaKnown RBP16.54■□□□□ 0.24
COPB1-209ENST00000533096 ARHGEF6Q15052 776 aa16.54■□□□□ 0.24
COPB1-209ENST00000533096 TAF1CQ15572 869 aaPredicted RBP16.54■□□□□ 0.24
COPB1-209ENST00000533096 CCL15Q16663 113 aa16.54■□□□□ 0.24
COPB1-209ENST00000533096 NBPF11Q86T75 865 aa16.54■□□□□ 0.24
COPB1-209ENST00000533096 DZIP1LQ8IYY4 767 aaKnown RBP16.54■□□□□ 0.24
COPB1-209ENST00000533096 BRI3BPQ8WY22 251 aa16.54■□□□□ 0.24
COPB1-209ENST00000533096 MS4A4AQ96JQ5 239 aa16.54■□□□□ 0.24
COPB1-209ENST00000533096 TMEM39BQ9GZU3 492 aa16.54■□□□□ 0.24
COPB1-209ENST00000533096 C9orf78Q9NZ63 289 aaPredicted RBP16.54■□□□□ 0.24
COPB1-209ENST00000533096 IQSEC3Q9UPP2 1182 aaPredicted RBP16.54■□□□□ 0.24
COPB1-209ENST00000533096 PDE4DIPQ5VU43 2346 aa16.53■□□□□ 0.24
COPB1-209ENST00000533096 SSC5DA1L4H1 1573 aa16.53■□□□□ 0.24
COPB1-209ENST00000533096 FRAT2O75474 233 aaPredicted RBP16.53■□□□□ 0.24
COPB1-209ENST00000533096 TNFAIP1Q13829 316 aa16.53■□□□□ 0.24
COPB1-209ENST00000533096 SPDYE2Q495Y8 402 aa16.53■□□□□ 0.24
COPB1-209ENST00000533096 SLC9C1Q4G0N8 1177 aa16.53■□□□□ 0.24
COPB1-209ENST00000533096 BEND3Q5T5X7 828 aa16.53■□□□□ 0.24
COPB1-209ENST00000533096 SLC4A10Q6U841 1118 aa16.53■□□□□ 0.24
COPB1-209ENST00000533096 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.53■□□□□ 0.24
COPB1-209ENST00000533096 ARMC5Q96C12 935 aa16.53■□□□□ 0.24
COPB1-209ENST00000533096 OTUD5Q96G74 571 aa16.53■□□□□ 0.24
COPB1-209ENST00000533096 PTCH2Q9Y6C5 1203 aa16.53■□□□□ 0.24
COPB1-209ENST00000533096 CRKP46108 304 aa16.52■□□□□ 0.24
COPB1-209ENST00000533096 GTF2A2P52657 109 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms