RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 TTLL11Q8NHH1 800 aa13.68□□□□□ -0.22
C11orf54-209ENST00000530620 TMC2Q8TDI7 906 aa13.68□□□□□ -0.22
C11orf54-209ENST00000530620 CDC5LQ99459 802 aaKnown RBP13.68□□□□□ -0.22
C11orf54-209ENST00000530620 STK31Q9BXU1 1019 aa13.68□□□□□ -0.22
C11orf54-209ENST00000530620 CHMP4AQ9BY43 222 aa13.68□□□□□ -0.22
C11orf54-209ENST00000530620 GREM2Q9H772 168 aa13.68□□□□□ -0.22
C11orf54-209ENST00000530620 MED23Q9ULK4 1368 aa13.68□□□□□ -0.22
C11orf54-209ENST00000530620 ATP2B4P23634 1241 aa13.67□□□□□ -0.22
C11orf54-209ENST00000530620 CCDC27Q2M243 656 aa13.67□□□□□ -0.22
C11orf54-209ENST00000530620 TWISTNBQ3B726 338 aaPredicted RBP13.67□□□□□ -0.22
C11orf54-209ENST00000530620 ANGEL2Q5VTE6 544 aaKnown RBP13.67□□□□□ -0.22
C11orf54-209ENST00000530620 RGMBQ6NW40 437 aa13.67□□□□□ -0.22
C11orf54-209ENST00000530620 UBE3BQ7Z3V4 1068 aa13.67□□□□□ -0.22
C11orf54-209ENST00000530620 WWC1Q8IX03 1113 aa13.67□□□□□ -0.22
C11orf54-209ENST00000530620 AGBL3Q8NEM8 1001 aa13.67□□□□□ -0.22
C11orf54-209ENST00000530620 CDCA5Q96FF9 252 aa13.67□□□□□ -0.22
C11orf54-209ENST00000530620 GMLQ99445 158 aa13.67□□□□□ -0.22
C11orf54-209ENST00000530620 C2orf72A6NCS6 295 aa13.66□□□□□ -0.22
C11orf54-209ENST00000530620 BSDC1Q9NW68 430 aaPredicted RBP13.66□□□□□ -0.22
C11orf54-209ENST00000530620 MINPP1Q9UNW1 487 aa13.66□□□□□ -0.22
C11orf54-209ENST00000530620 USP17L3A6NCW0 530 aa13.65□□□□□ -0.22
C11orf54-209ENST00000530620 USP17L4A6NCW7 530 aa13.65□□□□□ -0.22
C11orf54-209ENST00000530620 USP17L8P0C7I0 530 aa13.65□□□□□ -0.22
C11orf54-209ENST00000530620 SCARF1Q14162 830 aa13.65□□□□□ -0.22
C11orf54-209ENST00000530620 USP17L1Q7RTZ2 530 aa13.65□□□□□ -0.22
C11orf54-209ENST00000530620 PODNQ7Z5L7 613 aa13.65□□□□□ -0.22
C11orf54-209ENST00000530620 MCOLN1Q9GZU1 580 aa13.65□□□□□ -0.22
C11orf54-209ENST00000530620 MYOZ2Q9NPC6 264 aa13.65□□□□□ -0.22
C11orf54-209ENST00000530620 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
C11orf54-209ENST00000530620 CCDC85CA6NKD9 419 aa13.64□□□□□ -0.23
C11orf54-209ENST00000530620 H7C1W4 665 aa13.64□□□□□ -0.23
C11orf54-209ENST00000530620 SLC10A3P09131 477 aa13.64□□□□□ -0.23
C11orf54-209ENST00000530620 CCT4P50991 539 aaKnown RBP13.64□□□□□ -0.23
C11orf54-209ENST00000530620 ZNF157P51786 506 aaPredicted RBP13.64□□□□□ -0.23
C11orf54-209ENST00000530620 KIF23Q02241 960 aaPredicted RBP13.64□□□□□ -0.23
C11orf54-209ENST00000530620 FLIIQ13045 1269 aa13.64□□□□□ -0.23
C11orf54-209ENST00000530620 FAM161AQ3B820 660 aa13.64□□□□□ -0.23
C11orf54-209ENST00000530620 CCDC102AQ96A19 550 aa13.64□□□□□ -0.23
C11orf54-209ENST00000530620 MXD3Q9BW11 206 aa13.64□□□□□ -0.23
C11orf54-209ENST00000530620 SCAF8Q9UPN6 1271 aaKnown RBP13.64□□□□□ -0.23
C11orf54-209ENST00000530620 ARAP2Q8WZ64 1704 aa13.64□□□□□ -0.23
C11orf54-209ENST00000530620 IL16Q14005 1332 aa13.64□□□□□ -0.23
C11orf54-209ENST00000530620 PITPNM2Q9BZ72 1349 aa13.64□□□□□ -0.23
C11orf54-209ENST00000530620 LAMB1P07942 1786 aa13.63□□□□□ -0.23
C11orf54-209ENST00000530620 KLRK1P26718 216 aa13.63□□□□□ -0.23
C11orf54-209ENST00000530620 GCKRQ14397 625 aa13.63□□□□□ -0.23
C11orf54-209ENST00000530620 DACT2Q5SW24 774 aa13.63□□□□□ -0.23
C11orf54-209ENST00000530620 TXNRD3Q86VQ6 643 aa13.63□□□□□ -0.23
C11orf54-209ENST00000530620 CRISPLD2Q9H0B8 497 aa13.63□□□□□ -0.23
C11orf54-209ENST00000530620 GPHNQ9NQX3 736 aaPredicted RBP13.63□□□□□ -0.23
C11orf54-209ENST00000530620 IGHMBP2P38935 993 aaKnown RBP13.62□□□□□ -0.23
C11orf54-209ENST00000530620 CASP7P55210 303 aa13.62□□□□□ -0.23
C11orf54-209ENST00000530620 FKBP5Q13451 457 aaPredicted RBP13.62□□□□□ -0.23
C11orf54-209ENST00000530620 DGKZQ13574 1117 aa13.62□□□□□ -0.23
C11orf54-209ENST00000530620 NBPF9Q3BBW0 867 aa13.62□□□□□ -0.23
C11orf54-209ENST00000530620 RASAL3Q86YV0 1011 aa13.62□□□□□ -0.23
C11orf54-209ENST00000530620 FBXW7Q969H0 707 aa13.62□□□□□ -0.23
C11orf54-209ENST00000530620 PLA2G12BQ9BX93 195 aa13.62□□□□□ -0.23
C11orf54-209ENST00000530620 ITGA6P23229 1130 aa13.61□□□□□ -0.23
C11orf54-209ENST00000530620 DNAAF4Q8WXU2 420 aa13.61□□□□□ -0.23
C11orf54-209ENST00000530620 MRS2Q9HD23 443 aa13.61□□□□□ -0.23
C11orf54-209ENST00000530620 SAGE1Q9NXZ1 904 aa13.61□□□□□ -0.23
C11orf54-209ENST00000530620 ZNF804BA4D1E1 1349 aa13.61□□□□□ -0.23
C11orf54-209ENST00000530620 SNPHO15079 494 aa13.6□□□□□ -0.23
C11orf54-209ENST00000530620 PDE4AP27815 886 aa13.6□□□□□ -0.23
C11orf54-209ENST00000530620 STRIP1Q5VSL9 837 aa13.6□□□□□ -0.23
C11orf54-209ENST00000530620 PRAMEF18Q5VWM3 479 aa13.6□□□□□ -0.23
C11orf54-209ENST00000530620 MOB2Q70IA6 237 aa13.6□□□□□ -0.23
C11orf54-209ENST00000530620 LINS1Q8NG48 757 aa13.6□□□□□ -0.23
C11orf54-209ENST00000530620 COA1Q9GZY4 146 aa13.6□□□□□ -0.23
C11orf54-209ENST00000530620 MYH16Q9H6N6 1097 aa13.6□□□□□ -0.23
C11orf54-209ENST00000530620 RNF186Q9NXI6 227 aa13.6□□□□□ -0.23
C11orf54-209ENST00000530620 LEMD3Q9Y2U8 911 aa13.6□□□□□ -0.23
C11orf54-209ENST00000530620 MYO3BQ8WXR4 1341 aa13.6□□□□□ -0.23
C11orf54-209ENST00000530620 OTOFQ9HC10 1997 aa13.6□□□□□ -0.23
C11orf54-209ENST00000530620 TNRC18O15417 2968 aaPredicted RBP13.59□□□□□ -0.23
C11orf54-209ENST00000530620 WNT10BO00744 389 aa13.59□□□□□ -0.23
C11orf54-209ENST00000530620 TRPA1O75762 1119 aa13.59□□□□□ -0.23
C11orf54-209ENST00000530620 SASH1O94885 1247 aa13.59□□□□□ -0.23
C11orf54-209ENST00000530620 CSF1RP07333 972 aa13.59□□□□□ -0.23
C11orf54-209ENST00000530620 FKBP1BP68106 108 aa13.59□□□□□ -0.23
C11orf54-209ENST00000530620 CSRNP1Q96S65 589 aa13.59□□□□□ -0.23
C11orf54-209ENST00000530620 MPHOSPH8Q99549 860 aa13.59□□□□□ -0.23
C11orf54-209ENST00000530620 SALL2Q9Y467 1007 aaPredicted RBP13.59□□□□□ -0.23
C11orf54-209ENST00000530620 VAMP4O75379 141 aa13.58□□□□□ -0.24
C11orf54-209ENST00000530620 EXOSC9Q06265 439 aaKnown RBP13.58□□□□□ -0.24
C11orf54-209ENST00000530620 CHRNDQ07001 517 aa13.58□□□□□ -0.24
C11orf54-209ENST00000530620 OGFOD1Q8N543 542 aa13.58□□□□□ -0.24
C11orf54-209ENST00000530620 ANKRD2Q9GZV1 360 aa13.58□□□□□ -0.24
C11orf54-209ENST00000530620 IRS2Q9Y4H2 1338 aa13.58□□□□□ -0.24
C11orf54-209ENST00000530620 F6X3S4 739 aa13.57□□□□□ -0.24
C11orf54-209ENST00000530620 SNAP23O00161 211 aa13.57□□□□□ -0.24
C11orf54-209ENST00000530620 KCNJ4P48050 445 aa13.57□□□□□ -0.24
C11orf54-209ENST00000530620 RGS19P49795 217 aa13.57□□□□□ -0.24
C11orf54-209ENST00000530620 FOXK1P85037 733 aa13.57□□□□□ -0.24
C11orf54-209ENST00000530620 MLLT1Q03111 559 aaPredicted RBP13.57□□□□□ -0.24
C11orf54-209ENST00000530620 TTLL5Q6EMB2 1281 aa13.57□□□□□ -0.24
C11orf54-209ENST00000530620 KIAA0825Q8IV33 1275 aa13.57□□□□□ -0.24
C11orf54-209ENST00000530620 TSHZ2Q9NRE2 1034 aa13.57□□□□□ -0.24
C11orf54-209ENST00000530620 COL1A1P02452 1464 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms