RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 CRYBG1Q9Y4K1 1723 aa16.5■□□□□ 0.23
USP48-213ENST00000529637 COL15A1P39059 1388 aa16.5■□□□□ 0.23
USP48-213ENST00000529637 CAVIN2O95810 425 aa16.5■□□□□ 0.23
USP48-213ENST00000529637 SLC20A2Q08357 652 aa16.5■□□□□ 0.23
USP48-213ENST00000529637 RABL6Q3YEC7 729 aaPredicted RBP16.5■□□□□ 0.23
USP48-213ENST00000529637 LRP10Q7Z4F1 713 aa16.5■□□□□ 0.23
USP48-213ENST00000529637 ZRANB2O95218 330 aaKnown RBP eCLIP16.49■□□□□ 0.23
USP48-213ENST00000529637 WASHC4Q2M389 1173 aa16.49■□□□□ 0.23
USP48-213ENST00000529637 TMC6Q7Z403 805 aa16.49■□□□□ 0.23
USP48-213ENST00000529637 ZCRB1Q8TBF4 217 aaKnown RBP16.49■□□□□ 0.23
USP48-213ENST00000529637 ZBTB9Q96C00 473 aa16.49■□□□□ 0.23
USP48-213ENST00000529637 XPO4Q9C0E2 1151 aaKnown RBP16.49■□□□□ 0.23
USP48-213ENST00000529637 NCOA5Q9HCD5 579 aaKnown RBP16.49■□□□□ 0.23
USP48-213ENST00000529637 SMARCE1Q969G3 411 aa16.49■□□□□ 0.23
USP48-213ENST00000529637 USP28Q96RU2 1077 aa16.49■□□□□ 0.23
USP48-213ENST00000529637 PDIA4P13667 645 aaKnown RBP16.48■□□□□ 0.23
USP48-213ENST00000529637 KCND1Q9NSA2 647 aa16.48■□□□□ 0.23
USP48-213ENST00000529637 DNAI1Q9UI46 699 aa16.48■□□□□ 0.23
USP48-213ENST00000529637 SASH3O75995 380 aa16.48■□□□□ 0.23
USP48-213ENST00000529637 CADPS2Q86UW7 1296 aa16.48■□□□□ 0.23
USP48-213ENST00000529637 PUS3Q9BZE2 481 aaKnown RBP16.48■□□□□ 0.23
USP48-213ENST00000529637 IFNKQ9P0W0 207 aa16.48■□□□□ 0.23
USP48-213ENST00000529637 SMC2O95347 1197 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 GYS2P54840 703 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 HAND2P61296 217 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 SCRN1Q12765 414 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 PTPN21Q16825 1174 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 USPL1Q5W0Q7 1092 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 STOX1Q6ZVD7 989 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 ENGASEQ8NFI3 743 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 OSBPL5Q9H0X9 879 aaPredicted RBP16.47■□□□□ 0.23
USP48-213ENST00000529637 CEP126Q9P2H0 1117 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 ORC3Q9UBD5 711 aaPredicted RBP16.47■□□□□ 0.23
USP48-213ENST00000529637 A0A0G2JLW4 131 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 A0A1B0GUL7 405 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 FOXO4P98177 505 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 HSP90AB3PQ58FF7 597 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 HOMER1Q86YM7 354 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 CFAP45Q9UL16 551 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 PHRF1Q9P1Y6 1649 aaKnown RBP16.47■□□□□ 0.23
USP48-213ENST00000529637 IL15P40933 162 aaPredicted RBP16.47■□□□□ 0.23
USP48-213ENST00000529637 DPCR1Q3MIW9 517 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 ANO10Q9NW15 660 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 KAT6BQ8WYB5 2073 aa16.47■□□□□ 0.23
USP48-213ENST00000529637 KINO60870 393 aaKnown RBP16.46■□□□□ 0.23
USP48-213ENST00000529637 CCDC57Q2TAC2 916 aa16.46■□□□□ 0.23
USP48-213ENST00000529637 TSGA10IPQ3SY00 556 aa16.46■□□□□ 0.23
USP48-213ENST00000529637 DHX32Q7L7V1 743 aaKnown RBP16.46■□□□□ 0.23
USP48-213ENST00000529637 H7C1W4 665 aa16.46■□□□□ 0.23
USP48-213ENST00000529637 TTLL5Q6EMB2 1281 aa16.46■□□□□ 0.23
USP48-213ENST00000529637 TMCO3Q6UWJ1 677 aa16.46■□□□□ 0.23
USP48-213ENST00000529637 ATG9AQ7Z3C6 839 aa16.46■□□□□ 0.23
USP48-213ENST00000529637 UBXN4Q92575 508 aa16.46■□□□□ 0.23
USP48-213ENST00000529637 ZFP91Q96JP5 570 aaPredicted RBP16.46■□□□□ 0.23
USP48-213ENST00000529637 LCMT1Q9UIC8 334 aa16.46■□□□□ 0.23
USP48-213ENST00000529637 RCOR1Q9UKL0 485 aa16.46■□□□□ 0.23
USP48-213ENST00000529637 C5P01031 1676 aa16.46■□□□□ 0.22
USP48-213ENST00000529637 KIF2AO00139 706 aaPredicted RBP16.45■□□□□ 0.22
USP48-213ENST00000529637 EYA2O00167 538 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 GSDMDP57764 484 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 KRBA2Q6ZNG9 492 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 RAB11FIP4Q86YS3 637 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 CEP57L1Q8IYX8 460 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 FSIP1Q8NA03 581 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 PTPDC1A2A3K4 754 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 BIN1O00499 593 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 CASP7P55210 303 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 GOLGA8FQ08AF8 430 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 GOLGA8DPQ0D2H9 430 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 TTC39AQ5SRH9 613 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 CCDC73Q6ZRK6 1079 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 CCDC34Q96HJ3 373 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 A0A1B0GVL5 298 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 TRIM66O15016 1216 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 EVA1CP58658 441 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 FAM193AP78312 1265 aa16.45■□□□□ 0.22
USP48-213ENST00000529637 CTAGE5O15320 804 aa16.44■□□□□ 0.22
USP48-213ENST00000529637 SFPQP23246 707 aaKnown RBP eCLIP16.44■□□□□ 0.22
USP48-213ENST00000529637 ME1P48163 572 aa16.44■□□□□ 0.22
USP48-213ENST00000529637 CARD6Q9BX69 1037 aa16.44■□□□□ 0.22
USP48-213ENST00000529637 HMGB1P09429 215 aaKnown RBP16.44■□□□□ 0.22
USP48-213ENST00000529637 HSPD1P10809 573 aaKnown RBP16.44■□□□□ 0.22
USP48-213ENST00000529637 HSPA2P54652 639 aa16.44■□□□□ 0.22
USP48-213ENST00000529637 A0A0G2JS52 829 aa16.43■□□□□ 0.22
USP48-213ENST00000529637 URI1O94763 535 aaPredicted RBP16.43■□□□□ 0.22
USP48-213ENST00000529637 FAM160A1Q05DH4 1040 aa16.43■□□□□ 0.22
USP48-213ENST00000529637 ISM2Q6H9L7 571 aa16.43■□□□□ 0.22
USP48-213ENST00000529637 CREBRFQ8IUR6 639 aa16.43■□□□□ 0.22
USP48-213ENST00000529637 FAM177A1Q8N128 213 aaPredicted RBP16.43■□□□□ 0.22
USP48-213ENST00000529637 ALDH8A1Q9H2A2 487 aaPredicted RBP16.43■□□□□ 0.22
USP48-213ENST00000529637 ZSCAN16Q9H4T2 348 aaPredicted RBP16.43■□□□□ 0.22
USP48-213ENST00000529637 ETF1P62495 437 aaKnown RBP16.43■□□□□ 0.22
USP48-213ENST00000529637 CCDC158Q5M9N0 1113 aa16.43■□□□□ 0.22
USP48-213ENST00000529637 TRIM65Q6PJ69 517 aa16.43■□□□□ 0.22
USP48-213ENST00000529637 FAM89AQ96GI7 184 aa16.43■□□□□ 0.22
USP48-213ENST00000529637 TMX1Q9H3N1 280 aa16.43■□□□□ 0.22
USP48-213ENST00000529637 PCDH11XQ9BZA7 1347 aa16.43■□□□□ 0.22
USP48-213ENST00000529637 PCDH11YQ9BZA8 1340 aa16.43■□□□□ 0.22
USP48-213ENST00000529637 E7EWF7 191 aa16.43■□□□□ 0.22
USP48-213ENST00000529637 RNF113AO15541 343 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms