RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 PDCL3Q9H2J4 239 aa14.06□□□□□ -0.16
CHMP1B-201ENST00000526991 GLI3P10071 1580 aa14.06□□□□□ -0.16
CHMP1B-201ENST00000526991 E7EWF7 191 aa14.06□□□□□ -0.16
CHMP1B-201ENST00000526991 ZAP70P43403 619 aa14.06□□□□□ -0.16
CHMP1B-201ENST00000526991 RESTQ13127 1097 aa14.06□□□□□ -0.16
CHMP1B-201ENST00000526991 OSBP2Q969R2 916 aa14.06□□□□□ -0.16
CHMP1B-201ENST00000526991 MAST3O60307 1309 aa14.06□□□□□ -0.16
CHMP1B-201ENST00000526991 CTDNEP1O95476 244 aa14.06□□□□□ -0.16
CHMP1B-201ENST00000526991 IL15P40933 162 aaPredicted RBP14.06□□□□□ -0.16
CHMP1B-201ENST00000526991 SASS6Q6UVJ0 657 aa14.06□□□□□ -0.16
CHMP1B-201ENST00000526991 DHX32Q7L7V1 743 aaKnown RBP14.06□□□□□ -0.16
CHMP1B-201ENST00000526991 PARP4Q9UKK3 1724 aaKnown RBP14.05□□□□□ -0.16
CHMP1B-201ENST00000526991 LOC102724428A0A0B4J2F2 783 aa14.05□□□□□ -0.16
CHMP1B-201ENST00000526991 SIK1P57059 783 aa14.05□□□□□ -0.16
CHMP1B-201ENST00000526991 TTLL11Q8NHH1 800 aa14.05□□□□□ -0.16
CHMP1B-201ENST00000526991 FAM200AQ8TCP9 573 aa14.05□□□□□ -0.16
CHMP1B-201ENST00000526991 PIBF1Q8WXW3 757 aa14.05□□□□□ -0.16
CHMP1B-201ENST00000526991 ABCA3Q99758 1704 aa14.05□□□□□ -0.16
CHMP1B-201ENST00000526991 ZBTB22O15209 634 aa14.05□□□□□ -0.16
CHMP1B-201ENST00000526991 SUSD4Q5VX71 490 aa14.05□□□□□ -0.16
CHMP1B-201ENST00000526991 ZBTB38Q8NAP3 1195 aaPredicted RBP14.05□□□□□ -0.16
CHMP1B-201ENST00000526991 NSUN7Q8NE18 718 aaKnown RBP14.05□□□□□ -0.16
CHMP1B-201ENST00000526991 SPATA31A1Q5TZJ5 1347 aa14.04□□□□□ -0.16
CHMP1B-201ENST00000526991 POLR3DP05423 398 aaPredicted RBP14.04□□□□□ -0.16
CHMP1B-201ENST00000526991 CCDC186Q7Z3E2 898 aa14.04□□□□□ -0.16
CHMP1B-201ENST00000526991 DENND2AQ9ULE3 1009 aa14.04□□□□□ -0.16
CHMP1B-201ENST00000526991 IDH1O75874 414 aaKnown RBP14.04□□□□□ -0.16
CHMP1B-201ENST00000526991 ZNF165P49910 485 aa14.04□□□□□ -0.16
CHMP1B-201ENST00000526991 TSGA10IPQ3SY00 556 aa14.04□□□□□ -0.16
CHMP1B-201ENST00000526991 USP28Q96RU2 1077 aa14.04□□□□□ -0.16
CHMP1B-201ENST00000526991 TMEM51Q9NW97 253 aa14.04□□□□□ -0.16
CHMP1B-201ENST00000526991 NIP7Q9Y221 180 aaKnown RBP eCLIP14.04□□□□□ -0.16
CHMP1B-201ENST00000526991 BCL9O00512 1426 aa14.04□□□□□ -0.16
CHMP1B-201ENST00000526991 SHANK3Q9BYB0 1731 aa14.04□□□□□ -0.16
CHMP1B-201ENST00000526991 RXRAP19793 462 aa14.04□□□□□ -0.16
CHMP1B-201ENST00000526991 ME1P48163 572 aa14.04□□□□□ -0.16
CHMP1B-201ENST00000526991 SLC51AQ86UW1 340 aa14.04□□□□□ -0.16
CHMP1B-201ENST00000526991 CCAR1Q8IX12 1150 aaKnown RBP14.03□□□□□ -0.16
CHMP1B-201ENST00000526991 RNF113AO15541 343 aaKnown RBP14.03□□□□□ -0.16
CHMP1B-201ENST00000526991 ATP2B3Q16720 1220 aa14.03□□□□□ -0.16
CHMP1B-201ENST00000526991 ZMYM1Q5SVZ6 1142 aa14.03□□□□□ -0.16
CHMP1B-201ENST00000526991 GOLPH3LQ9H4A5 285 aa14.03□□□□□ -0.16
CHMP1B-201ENST00000526991 CLSTN2Q9H4D0 955 aa14.03□□□□□ -0.16
CHMP1B-201ENST00000526991 PCCAP05165 728 aaPredicted RBP14.02□□□□□ -0.16
CHMP1B-201ENST00000526991 PHKA1P46020 1223 aa14.02□□□□□ -0.17
CHMP1B-201ENST00000526991 CTSWP56202 376 aa14.02□□□□□ -0.17
CHMP1B-201ENST00000526991 CCDC158Q5M9N0 1113 aa14.02□□□□□ -0.17
CHMP1B-201ENST00000526991 TNS2Q63HR2 1409 aa14.02□□□□□ -0.17
CHMP1B-201ENST00000526991 PFKFB2O60825 505 aa14.01□□□□□ -0.17
CHMP1B-201ENST00000526991 PDIA3P30101 505 aaKnown RBP14.01□□□□□ -0.17
CHMP1B-201ENST00000526991 INTS5Q6P9B9 1019 aaKnown RBP14.01□□□□□ -0.17
CHMP1B-201ENST00000526991 C11orf57Q6ZUT1 292 aaPredicted RBP14.01□□□□□ -0.17
CHMP1B-201ENST00000526991 CCDC144CPQ8IYA2 1237 aa14.01□□□□□ -0.17
CHMP1B-201ENST00000526991 TEX13AQ9BXU3 409 aaPredicted RBP14.01□□□□□ -0.17
CHMP1B-201ENST00000526991 PUS7LQ9H0K6 701 aaKnown RBP14.01□□□□□ -0.17
CHMP1B-201ENST00000526991 JAG2Q9Y219 1238 aa14.01□□□□□ -0.17
CHMP1B-201ENST00000526991 ELP1O95163 1332 aa14.01□□□□□ -0.17
CHMP1B-201ENST00000526991 ANKRD18BA2A2Z9 1011 aa14.01□□□□□ -0.17
CHMP1B-201ENST00000526991 APPP05067 770 aa14.01□□□□□ -0.17
CHMP1B-201ENST00000526991 ARID5BQ14865 1188 aa14.01□□□□□ -0.17
CHMP1B-201ENST00000526991 INCENPQ9NQS7 918 aa14.01□□□□□ -0.17
CHMP1B-201ENST00000526991 DDX19AQ9NUU7 478 aaKnown RBP14.01□□□□□ -0.17
CHMP1B-201ENST00000526991 MCAMP43121 646 aa14□□□□□ -0.17
CHMP1B-201ENST00000526991 ISM2Q6H9L7 571 aa14□□□□□ -0.17
CHMP1B-201ENST00000526991 TEX2Q8IWB9 1127 aa14□□□□□ -0.17
CHMP1B-201ENST00000526991 HELLSQ9NRZ9 838 aa14□□□□□ -0.17
CHMP1B-201ENST00000526991 CCDC87Q9NVE4 849 aa14□□□□□ -0.17
CHMP1B-201ENST00000526991 SH3TC1Q8TE82 1336 aa14□□□□□ -0.17
CHMP1B-201ENST00000526991 ITGB4P16144 1822 aa14□□□□□ -0.17
CHMP1B-201ENST00000526991 A0A1B0GVL5 298 aa14□□□□□ -0.17
CHMP1B-201ENST00000526991 FGAP02671 866 aa14□□□□□ -0.17
CHMP1B-201ENST00000526991 NKX2-3Q8TAU0 364 aa14□□□□□ -0.17
CHMP1B-201ENST00000526991 SRP68Q9UHB9 627 aaKnown RBP14□□□□□ -0.17
CHMP1B-201ENST00000526991 CFAP45Q9UL16 551 aa14□□□□□ -0.17
CHMP1B-201ENST00000526991 NHSL1Q5SYE7 1610 aa14□□□□□ -0.17
CHMP1B-201ENST00000526991 JCADQ9P266 1359 aa14□□□□□ -0.17
CHMP1B-201ENST00000526991 KLF18A0A0U1RQI7 1052 aa13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 TOM1O60784 492 aa13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 ADD1P35611 737 aaKnown RBP13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 EXOSC10Q01780 885 aaKnown RBP13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 C3orf67Q6ZVT6 689 aa13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 FSIP1Q8NA03 581 aa13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 C16orf45Q96MC5 204 aaPredicted RBP13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 ALDH8A1Q9H2A2 487 aaPredicted RBP13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 BIN1O00499 593 aa13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 KIAA1524Q8TCG1 905 aa13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 AIFM3Q96NN9 605 aa13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 MPHOSPH8Q99549 860 aa13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 GOLGA8BA8MQT2 603 aa13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 AMIGO3Q86WK7 504 aa13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 SMARCC2Q8TAQ2 1214 aa13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 DSCC1Q9BVC3 393 aa13.99□□□□□ -0.17
CHMP1B-201ENST00000526991 PALLDQ8WX93 1383 aa13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 PRC1O43663 620 aa13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 FDPSP14324 419 aaKnown RBP13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 CDK11BP21127 795 aaKnown RBP13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 SF3A1Q15459 793 aaKnown RBP13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 CCDC73Q6ZRK6 1079 aa13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 FILIP1Q7Z7B0 1213 aa13.98□□□□□ -0.17
CHMP1B-201ENST00000526991 ILDR1Q86SU0 546 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms