RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 IRX5P78411 483 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-202ENST00000524773 FKBP4Q02790 459 aaKnown RBP eCLIP15.3■□□□□ 0.04
CAPN1-202ENST00000524773 NAA16Q6N069 864 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-202ENST00000524773 ANKRD24Q8TF21 1146 aa15.3■□□□□ 0.04
CAPN1-202ENST00000524773 ZNF496Q96IT1 587 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-202ENST00000524773 NOL10Q9BSC4 688 aaKnown RBP15.3■□□□□ 0.04
CAPN1-202ENST00000524773 HDAC5Q9UQL6 1122 aa15.3■□□□□ 0.04
CAPN1-202ENST00000524773 M0R2C6 588 aa15.3■□□□□ 0.04
CAPN1-202ENST00000524773 NEMFO60524 1076 aa15.3■□□□□ 0.04
CAPN1-202ENST00000524773 NEDD4P46934 1319 aa15.3■□□□□ 0.04
CAPN1-202ENST00000524773 CARD6Q9BX69 1037 aa15.3■□□□□ 0.04
CAPN1-202ENST00000524773 ZSWIM4Q9H7M6 989 aa15.3■□□□□ 0.04
CAPN1-202ENST00000524773 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.3■□□□□ 0.043e-6■□□□□ 10.3
CAPN1-202ENST00000524773 ZNF202O95125 648 aa15.3■□□□□ 0.04
CAPN1-202ENST00000524773 SLC3A2P08195 630 aaKnown RBP15.3■□□□□ 0.04
CAPN1-202ENST00000524773 PLA2G4AP47712 749 aa15.3■□□□□ 0.04
CAPN1-202ENST00000524773 ZC3H6P61129 1189 aaKnown RBP15.3■□□□□ 0.04
CAPN1-202ENST00000524773 ANKRD13DQ6ZTN6 518 aa15.3■□□□□ 0.04
CAPN1-202ENST00000524773 LINC00301Q8NCQ3 95 aa15.3■□□□□ 0.04
CAPN1-202ENST00000524773 HAUS7Q99871 368 aa15.3■□□□□ 0.04
CAPN1-202ENST00000524773 NAT10Q9H0A0 1025 aaKnown RBP15.3■□□□□ 0.04
CAPN1-202ENST00000524773 C19orf44Q9H6X5 657 aa15.3■□□□□ 0.04
CAPN1-202ENST00000524773 MROH7-TTC4A0A0A0MT08 1334 aa15.29■□□□□ 0.04
CAPN1-202ENST00000524773 WDHD1O75717 1129 aaPredicted RBP15.29■□□□□ 0.04
CAPN1-202ENST00000524773 PNMA6AP0CW24 399 aaPredicted RBP15.29■□□□□ 0.04
CAPN1-202ENST00000524773 EXOSC10Q01780 885 aaKnown RBP15.29■□□□□ 0.04
CAPN1-202ENST00000524773 NCAPHQ15003 741 aa15.29■□□□□ 0.04
CAPN1-202ENST00000524773 LRRC24Q50LG9 513 aa15.29■□□□□ 0.04
CAPN1-202ENST00000524773 JCADQ9P266 1359 aa15.29■□□□□ 0.04
CAPN1-202ENST00000524773 FANCCQ00597 558 aa15.29■□□□□ 0.04
CAPN1-202ENST00000524773 PNOCQ13519 176 aa15.29■□□□□ 0.04
CAPN1-202ENST00000524773 KBTBD3Q8NAB2 608 aa15.29■□□□□ 0.04
CAPN1-202ENST00000524773 CLIC6Q96NY7 704 aa15.29■□□□□ 0.04
CAPN1-202ENST00000524773 PAG1Q9NWQ8 432 aa15.29■□□□□ 0.04
CAPN1-202ENST00000524773 CAVIN2O95810 425 aa15.28■□□□□ 0.04
CAPN1-202ENST00000524773 ST5P78524 1137 aa15.28■□□□□ 0.04
CAPN1-202ENST00000524773 ZNF790Q6PG37 636 aa15.28■□□□□ 0.04
CAPN1-202ENST00000524773 PI16Q6UXB8 463 aa15.28■□□□□ 0.04
CAPN1-202ENST00000524773 C8orf76Q96K31 380 aa15.28■□□□□ 0.04
CAPN1-202ENST00000524773 UTYO14607 1347 aa15.28■□□□□ 0.04
CAPN1-202ENST00000524773 SPTLC2O15270 562 aa15.28■□□□□ 0.04
CAPN1-202ENST00000524773 H2AFXP16104 143 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-202ENST00000524773 CFAP100Q494V2 611 aa15.28■□□□□ 0.04
CAPN1-202ENST00000524773 OSBPL5Q9H0X9 879 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-202ENST00000524773 MAST3O60307 1309 aa15.28■□□□□ 0.04
CAPN1-202ENST00000524773 KLF18A0A0U1RQI7 1052 aa15.27■□□□□ 0.04
CAPN1-202ENST00000524773 FOXN1O15353 648 aa15.27■□□□□ 0.04
CAPN1-202ENST00000524773 SERPINC1P01008 464 aa15.27■□□□□ 0.04
CAPN1-202ENST00000524773 PFKFB1P16118 471 aa15.27■□□□□ 0.04
CAPN1-202ENST00000524773 GNL2Q13823 731 aaKnown RBP15.27■□□□□ 0.04
CAPN1-202ENST00000524773 ADALQ6DHV7 355 aa15.27■□□□□ 0.04
CAPN1-202ENST00000524773 METTL22Q9BUU2 404 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-202ENST00000524773 PUS3Q9BZE2 481 aaKnown RBP15.27■□□□□ 0.04
CAPN1-202ENST00000524773 HSD3B7Q9H2F3 369 aa15.27■□□□□ 0.04
CAPN1-202ENST00000524773 FAM53CQ9NYF3 392 aa15.27■□□□□ 0.04
CAPN1-202ENST00000524773 ORC3Q9UBD5 711 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-202ENST00000524773 GOLGA8BA8MQT2 603 aa15.27■□□□□ 0.04
CAPN1-202ENST00000524773 GSDMDP57764 484 aa15.27■□□□□ 0.04
CAPN1-202ENST00000524773 WASHC4Q2M389 1173 aa15.27■□□□□ 0.04
CAPN1-202ENST00000524773 PDILTQ8N807 584 aa15.27■□□□□ 0.04
CAPN1-202ENST00000524773 OSBP2Q969R2 916 aa15.27■□□□□ 0.04
CAPN1-202ENST00000524773 COPRSQ9NQ92 184 aa15.27■□□□□ 0.04
CAPN1-202ENST00000524773 GCP02774 474 aa15.27■□□□□ 0.03
CAPN1-202ENST00000524773 HNRNPH2P55795 449 aaKnown RBP15.27■□□□□ 0.03
CAPN1-202ENST00000524773 CCDC93Q567U6 631 aa15.27■□□□□ 0.03
CAPN1-202ENST00000524773 UBXN4Q92575 508 aa15.27■□□□□ 0.03
CAPN1-202ENST00000524773 PALLDQ8WX93 1383 aa15.26■□□□□ 0.03
CAPN1-202ENST00000524773 USP54Q70EL1 1684 aa15.26■□□□□ 0.03
CAPN1-202ENST00000524773 SALL1Q9NSC2 1324 aa15.26■□□□□ 0.03
CAPN1-202ENST00000524773 LLPHQ9BRT6 129 aaKnown RBP15.26■□□□□ 0.03
CAPN1-202ENST00000524773 L2HGDHQ9H9P8 463 aa15.26■□□□□ 0.03
CAPN1-202ENST00000524773 SASH3O75995 380 aa15.26■□□□□ 0.03
CAPN1-202ENST00000524773 UBASH3AP57075 661 aa15.26■□□□□ 0.03
CAPN1-202ENST00000524773 MNS1Q8NEH6 495 aa15.26■□□□□ 0.03
CAPN1-202ENST00000524773 DESI2Q9BSY9 194 aa15.26■□□□□ 0.03
CAPN1-202ENST00000524773 IRX2Q9BZI1 471 aaPredicted RBP15.26■□□□□ 0.03
CAPN1-202ENST00000524773 RTEL1Q9NZ71 1219 aa15.26■□□□□ 0.03
CAPN1-202ENST00000524773 BMS1Q14692 1282 aaKnown RBP15.25■□□□□ 0.03
CAPN1-202ENST00000524773 WDR24Q96S15 920 aa15.25■□□□□ 0.03
CAPN1-202ENST00000524773 A0A0U1RQJ8 604 aa15.25■□□□□ 0.03
CAPN1-202ENST00000524773 TFRCP02786 760 aaKnown RBP15.25■□□□□ 0.03
CAPN1-202ENST00000524773 CAPN2P17655 700 aa15.25■□□□□ 0.03
CAPN1-202ENST00000524773 ATF3P18847 181 aa15.25■□□□□ 0.03
CAPN1-202ENST00000524773 CDC27P30260 824 aa15.25■□□□□ 0.03
CAPN1-202ENST00000524773 ZNF827Q17R98 1081 aa15.25■□□□□ 0.03
CAPN1-202ENST00000524773 MYSM1Q5VVJ2 828 aa15.25■□□□□ 0.03
CAPN1-202ENST00000524773 TRIM65Q6PJ69 517 aa15.25■□□□□ 0.03
CAPN1-202ENST00000524773 ATRIPQ8WXE1 791 aa15.25■□□□□ 0.03
CAPN1-202ENST00000524773 PHKBQ93100 1093 aa15.25■□□□□ 0.03
CAPN1-202ENST00000524773 SENP2Q9HC62 589 aa15.25■□□□□ 0.03
CAPN1-202ENST00000524773 INCENPQ9NQS7 918 aa15.25■□□□□ 0.03
CAPN1-202ENST00000524773 FANCLQ9NW38 375 aa15.25■□□□□ 0.03
CAPN1-202ENST00000524773 MARF1Q9Y4F3 1742 aaKnown RBP15.25■□□□□ 0.03
CAPN1-202ENST00000524773 ADKP55263 362 aaKnown RBP15.24■□□□□ 0.03
CAPN1-202ENST00000524773 ETF1P62495 437 aaKnown RBP15.24■□□□□ 0.03
CAPN1-202ENST00000524773 TEX35Q5T0J7 233 aa15.24■□□□□ 0.03
CAPN1-202ENST00000524773 SYNE3Q6ZMZ3 975 aa15.24■□□□□ 0.03
CAPN1-202ENST00000524773 MYL10Q9BUA6 226 aa15.24■□□□□ 0.03
CAPN1-202ENST00000524773 ZNF330Q9Y3S2 320 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-202ENST00000524773 TMEM94Q12767 1356 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms