RNA–Protein interactions for RNA: ENST00000524361.5

LINC00534-204, long intergenic non-protein coding RNA 534, humanhuman

TSL 3

Gene LINC00534, Length 620 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-204ENST00000524361 RIC1Q4ADV7 1423 aa8□□□□□ -1.13
LINC00534-204ENST00000524361 WTIPA6NIX2 430 aaPredicted RBP7.99□□□□□ -1.13
LINC00534-204ENST00000524361 A6NJR5 290 aa7.99□□□□□ -1.13
LINC00534-204ENST00000524361 RAD21O60216 631 aa7.99□□□□□ -1.13
LINC00534-204ENST00000524361 EGFRP00533 1210 aa7.99□□□□□ -1.13
LINC00534-204ENST00000524361 HOXB7P09629 217 aa7.99□□□□□ -1.13
LINC00534-204ENST00000524361 TBC1D10BQ4KMP7 808 aaPredicted RBP7.99□□□□□ -1.13
LINC00534-204ENST00000524361 CCDC82Q8N4S0 544 aa7.99□□□□□ -1.13
LINC00534-204ENST00000524361 KRI1Q8N9T8 703 aaKnown RBP7.99□□□□□ -1.13
LINC00534-204ENST00000524361 TSR2Q969E8 191 aaKnown RBP7.99□□□□□ -1.13
LINC00534-204ENST00000524361 IFT57Q9NWB7 429 aa7.99□□□□□ -1.13
LINC00534-204ENST00000524361 SALL2Q9Y467 1007 aaPredicted RBP7.99□□□□□ -1.13
LINC00534-204ENST00000524361 KDM3BQ7LBC6 1761 aa7.99□□□□□ -1.13
LINC00534-204ENST00000524361 H7C1D1 291 aa7.98□□□□□ -1.13
LINC00534-204ENST00000524361 ECE2O60344 883 aa7.98□□□□□ -1.13
LINC00534-204ENST00000524361 HSPA8P11142 646 aaKnown RBP7.98□□□□□ -1.13
LINC00534-204ENST00000524361 GNAI1P63096 354 aa7.98□□□□□ -1.13
LINC00534-204ENST00000524361 MAP2K1Q02750 393 aaPredicted RBP7.98□□□□□ -1.13
LINC00534-204ENST00000524361 TRIM28Q13263 835 aaKnown RBP7.98□□□□□ -1.13
LINC00534-204ENST00000524361 ZBTB38Q8NAP3 1195 aaPredicted RBP7.98□□□□□ -1.13
LINC00534-204ENST00000524361 TBC1D16Q8TBP0 767 aa7.98□□□□□ -1.13
LINC00534-204ENST00000524361 PRDM10Q9NQV6 1147 aa7.98□□□□□ -1.13
LINC00534-204ENST00000524361 ANKIB1Q9P2G1 1089 aa7.98□□□□□ -1.13
LINC00534-204ENST00000524361 TLL2Q9Y6L7 1015 aa7.98□□□□□ -1.13
LINC00534-204ENST00000524361 CACNA1SQ13698 1873 aa7.98□□□□□ -1.13
LINC00534-204ENST00000524361 PI4KAP2A4QPH2 592 aa7.97□□□□□ -1.13
LINC00534-204ENST00000524361 COL9A1P20849 921 aa7.97□□□□□ -1.13
LINC00534-204ENST00000524361 PDE4DQ08499 809 aa7.97□□□□□ -1.13
LINC00534-204ENST00000524361 CCDC30Q5VVM6 783 aa7.97□□□□□ -1.13
LINC00534-204ENST00000524361 CDC37L1Q7L3B6 337 aa7.97□□□□□ -1.13
LINC00534-204ENST00000524361 G2E3Q7L622 706 aa7.97□□□□□ -1.13
LINC00534-204ENST00000524361 TMC4Q7Z404 712 aa7.97□□□□□ -1.13
LINC00534-204ENST00000524361 SAPCD2Q86UD0 394 aa7.97□□□□□ -1.13
LINC00534-204ENST00000524361 PI4KAP1Q8N8J0 262 aa7.97□□□□□ -1.13
LINC00534-204ENST00000524361 RGS22Q8NE09 1264 aa7.97□□□□□ -1.13
LINC00534-204ENST00000524361 ZIC5Q96T25 663 aa7.97□□□□□ -1.13
LINC00534-204ENST00000524361 METTL22Q9BUU2 404 aaPredicted RBP7.97□□□□□ -1.13
LINC00534-204ENST00000524361 ZC3H12CQ9C0D7 883 aaKnown RBP7.97□□□□□ -1.13
LINC00534-204ENST00000524361 PGAP2Q9UHJ9 254 aa7.97□□□□□ -1.13
LINC00534-204ENST00000524361 SCAF8Q9UPN6 1271 aaKnown RBP7.97□□□□□ -1.13
LINC00534-204ENST00000524361 MAP3K2Q9Y2U5 619 aa7.97□□□□□ -1.13
LINC00534-204ENST00000524361 LTBP1Q14766 1721 aa7.97□□□□□ -1.13
LINC00534-204ENST00000524361 ASTN2O75129 1339 aaPredicted RBP7.97□□□□□ -1.13
LINC00534-204ENST00000524361 DLG5Q8TDM6 1919 aa7.96□□□□□ -1.13
LINC00534-204ENST00000524361 ADM5C9JUS6 153 aa7.96□□□□□ -1.14
LINC00534-204ENST00000524361 TRIM66O15016 1216 aa7.96□□□□□ -1.14
LINC00534-204ENST00000524361 UFL1O94874 794 aa7.96□□□□□ -1.14
LINC00534-204ENST00000524361 PCCAP05165 728 aaPredicted RBP7.96□□□□□ -1.14
LINC00534-204ENST00000524361 IGKV5-2P06315 115 aa7.96□□□□□ -1.14
LINC00534-204ENST00000524361 ECE1P42892 770 aa7.96□□□□□ -1.14
LINC00534-204ENST00000524361 CALD1Q05682 793 aaKnown RBP7.96□□□□□ -1.14
LINC00534-204ENST00000524361 CWF19L2Q2TBE0 894 aaKnown RBP7.96□□□□□ -1.14
LINC00534-204ENST00000524361 KRT26Q7Z3Y9 468 aa7.96□□□□□ -1.14
LINC00534-204ENST00000524361 CCDC191Q8NCU4 936 aa7.96□□□□□ -1.14
LINC00534-204ENST00000524361 EYA3Q99504 573 aa7.96□□□□□ -1.14
LINC00534-204ENST00000524361 BEGAINQ9BUH8 593 aa7.96□□□□□ -1.14
LINC00534-204ENST00000524361 CWC25Q9NXE8 425 aaPredicted RBP7.96□□□□□ -1.14
LINC00534-204ENST00000524361 NUP98P52948 1817 aa7.96□□□□□ -1.14
LINC00534-204ENST00000524361 LAMB4A4D0S4 1761 aa7.95□□□□□ -1.14
LINC00534-204ENST00000524361 DPYSL4O14531 572 aa7.95□□□□□ -1.14
LINC00534-204ENST00000524361 TRAK2O60296 914 aa7.95□□□□□ -1.14
LINC00534-204ENST00000524361 PDE8AO60658 829 aa7.95□□□□□ -1.14
LINC00534-204ENST00000524361 HMGB1P09429 215 aaKnown RBP7.95□□□□□ -1.14
LINC00534-204ENST00000524361 PTPN5P54829 565 aa7.95□□□□□ -1.14
LINC00534-204ENST00000524361 CCDC152Q4G0S7 254 aa7.95□□□□□ -1.14
LINC00534-204ENST00000524361 KSR2Q6VAB6 950 aa7.95□□□□□ -1.14
LINC00534-204ENST00000524361 DPF2Q92785 391 aa7.95□□□□□ -1.14
LINC00534-204ENST00000524361 DCPSQ96C86 337 aaKnown RBP7.95□□□□□ -1.14
LINC00534-204ENST00000524361 MXD3Q9BW11 206 aa7.95□□□□□ -1.14
LINC00534-204ENST00000524361 GGA1Q9UJY5 639 aa7.95□□□□□ -1.14
LINC00534-204ENST00000524361 DICER1Q9UPY3 1922 aaKnown RBP7.95□□□□□ -1.14
LINC00534-204ENST00000524361 RTL9Q8NET4 1388 aa7.95□□□□□ -1.14
LINC00534-204ENST00000524361 ARFGEF2Q9Y6D5 1785 aa7.94□□□□□ -1.14
LINC00534-204ENST00000524361 DDX58O95786 925 aaKnown RBP7.94□□□□□ -1.14
LINC00534-204ENST00000524361 VIL1P09327 827 aaKnown RBP7.94□□□□□ -1.14
LINC00534-204ENST00000524361 MAP2K2P36507 400 aa7.94□□□□□ -1.14
LINC00534-204ENST00000524361 HUNKP57058 714 aa7.94□□□□□ -1.14
LINC00534-204ENST00000524361 PROX2Q3B8N5 592 aa7.94□□□□□ -1.14
LINC00534-204ENST00000524361 PRAMEF18Q5VWM3 479 aa7.94□□□□□ -1.14
LINC00534-204ENST00000524361 THSD4Q6ZMP0 1018 aa7.94□□□□□ -1.14
LINC00534-204ENST00000524361 ANKRD18AQ8IVF6 992 aa7.94□□□□□ -1.14
LINC00534-204ENST00000524361 WWC1Q8IX03 1113 aa7.94□□□□□ -1.14
LINC00534-204ENST00000524361 ABHD8Q96I13 439 aa7.94□□□□□ -1.14
LINC00534-204ENST00000524361 GREM2Q9H772 168 aa7.94□□□□□ -1.14
LINC00534-204ENST00000524361 COL4A1P02462 1669 aa7.94□□□□□ -1.14
LINC00534-204ENST00000524361 SCN4AP35499 1836 aa7.94□□□□□ -1.14
LINC00534-204ENST00000524361 ADAMTSL1Q8N6G6 1762 aa7.93□□□□□ -1.14
LINC00534-204ENST00000524361 CCDC85CA6NKD9 419 aa7.93□□□□□ -1.14
LINC00534-204ENST00000524361 PPP1R3GB7ZBB8 358 aa7.93□□□□□ -1.14
LINC00534-204ENST00000524361 CTSWP56202 376 aa7.93□□□□□ -1.14
LINC00534-204ENST00000524361 SCARF1Q14162 830 aa7.93□□□□□ -1.14
LINC00534-204ENST00000524361 KIF4BQ2VIQ3 1234 aa7.93□□□□□ -1.14
LINC00534-204ENST00000524361 TWISTNBQ3B726 338 aaPredicted RBP7.93□□□□□ -1.14
LINC00534-204ENST00000524361 TYW1BQ6NUM6 668 aa7.93□□□□□ -1.14
LINC00534-204ENST00000524361 UBE3BQ7Z3V4 1068 aa7.93□□□□□ -1.14
LINC00534-204ENST00000524361 TTLL11Q8NHH1 800 aa7.93□□□□□ -1.14
LINC00534-204ENST00000524361 FBXW7Q969H0 707 aa7.93□□□□□ -1.14
LINC00534-204ENST00000524361 STK31Q9BXU1 1019 aa7.93□□□□□ -1.14
LINC00534-204ENST00000524361 GGA3Q9NZ52 723 aa7.93□□□□□ -1.14
LINC00534-204ENST00000524361 MINPP1Q9UNW1 487 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms