RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 NOC2LQ9Y3T9 749 aaKnown RBP17.36■□□□□ 0.37
UBR5-207ENST00000520539 MX1P20591 662 aa17.35■□□□□ 0.37
UBR5-207ENST00000520539 FBXO41Q8TF61 875 aa17.35■□□□□ 0.37
UBR5-207ENST00000520539 LMNB1P20700 586 aa17.35■□□□□ 0.37
UBR5-207ENST00000520539 NMIQ13287 307 aaPredicted RBP17.35■□□□□ 0.37
UBR5-207ENST00000520539 RABEP2Q9H5N1 569 aa17.35■□□□□ 0.37
UBR5-207ENST00000520539 RIPOR2Q9Y4F9 1068 aa17.35■□□□□ 0.37
UBR5-207ENST00000520539 SMARCA2P51531 1590 aa17.35■□□□□ 0.37
UBR5-207ENST00000520539 MUM1L1Q5H9M0 696 aa17.35■□□□□ 0.37
UBR5-207ENST00000520539 PPP1R2P41236 205 aa17.35■□□□□ 0.37
UBR5-207ENST00000520539 MRFAP1L1Q96HT8 127 aa17.35■□□□□ 0.37
UBR5-207ENST00000520539 CCDC93Q567U6 631 aa17.35■□□□□ 0.37
UBR5-207ENST00000520539 NECTIN2Q92692 538 aa17.35■□□□□ 0.37
UBR5-207ENST00000520539 KIFAP3Q92845 792 aa17.35■□□□□ 0.37
UBR5-207ENST00000520539 DHX57Q6P158 1386 aaKnown RBP17.34■□□□□ 0.37
UBR5-207ENST00000520539 RRP36Q96EU6 259 aaKnown RBP17.34■□□□□ 0.37
UBR5-207ENST00000520539 MAP7D3Q8IWC1 876 aa17.34■□□□□ 0.37
UBR5-207ENST00000520539 NEK11Q8NG66 645 aa17.34■□□□□ 0.37
UBR5-207ENST00000520539 NBPF7P0C2Y1 421 aaPredicted RBP17.34■□□□□ 0.37
UBR5-207ENST00000520539 BLVRAP53004 296 aa17.34■□□□□ 0.37
UBR5-207ENST00000520539 PHACTR2O75167 634 aa17.34■□□□□ 0.37
UBR5-207ENST00000520539 FKBP4Q02790 459 aaKnown RBP eCLIP17.34■□□□□ 0.37
UBR5-207ENST00000520539 CPLX3Q8WVH0 158 aa17.34■□□□□ 0.37
UBR5-207ENST00000520539 PAIP2BQ9ULR5 123 aaKnown RBP17.34■□□□□ 0.37
UBR5-207ENST00000520539 SYCE1Q8N0S2 351 aa17.33■□□□□ 0.37
UBR5-207ENST00000520539 STAT6P42226 847 aa17.33■□□□□ 0.37
UBR5-207ENST00000520539 ZSCAN26Q16670 478 aa17.33■□□□□ 0.37
UBR5-207ENST00000520539 KDM4AO75164 1064 aa17.33■□□□□ 0.36
UBR5-207ENST00000520539 EEF2P13639 858 aaKnown RBP17.33■□□□□ 0.36
UBR5-207ENST00000520539 PLCB3Q01970 1234 aa17.33■□□□□ 0.36
UBR5-207ENST00000520539 NLRP7Q8WX94 980 aa17.33■□□□□ 0.36
UBR5-207ENST00000520539 TMED1Q13445 227 aa17.33■□□□□ 0.36
UBR5-207ENST00000520539 LCA5Q86VQ0 697 aa17.33■□□□□ 0.36
UBR5-207ENST00000520539 HOMER3Q9NSC5 361 aa17.33■□□□□ 0.36
UBR5-207ENST00000520539 CCDC25Q86WR0 208 aa17.33■□□□□ 0.36
UBR5-207ENST00000520539 FAM186BQ8IYM0 893 aa17.33■□□□□ 0.36
UBR5-207ENST00000520539 EFHD1Q9BUP0 239 aa17.33■□□□□ 0.36
UBR5-207ENST00000520539 NONOQ15233 471 aaKnown RBP eCLIP17.33■□□□□ 0.362e-6■■■□□ 15
UBR5-207ENST00000520539 ATL3Q6DD88 541 aa17.33■□□□□ 0.36
UBR5-207ENST00000520539 PDZD8Q8NEN9 1154 aa17.33■□□□□ 0.36
UBR5-207ENST00000520539 ANKFY1Q9P2R3 1169 aa17.33■□□□□ 0.36
UBR5-207ENST00000520539 DCAF8L1A6NGE4 600 aa17.32■□□□□ 0.36
UBR5-207ENST00000520539 C11orf95C9JLR9 678 aaPredicted RBP17.32■□□□□ 0.36
UBR5-207ENST00000520539 NAPGQ99747 312 aaPredicted RBP17.32■□□□□ 0.36
UBR5-207ENST00000520539 RBM27Q9P2N5 1060 aaKnown RBP17.32■□□□□ 0.36
UBR5-207ENST00000520539 E7EVH7 732 aa17.32■□□□□ 0.36
UBR5-207ENST00000520539 NUCB1Q02818 461 aa17.32■□□□□ 0.36
UBR5-207ENST00000520539 RAB17Q9H0T7 212 aa17.32■□□□□ 0.36
UBR5-207ENST00000520539 TEKT2Q9UIF3 430 aa17.32■□□□□ 0.36
UBR5-207ENST00000520539 TWISTNBQ3B726 338 aaPredicted RBP17.32■□□□□ 0.36
UBR5-207ENST00000520539 GRAMD4Q6IC98 578 aa17.32■□□□□ 0.36
UBR5-207ENST00000520539 MRPL46Q9H2W6 279 aaKnown RBP17.32■□□□□ 0.36
UBR5-207ENST00000520539 HHATQ5VTY9 493 aa17.32■□□□□ 0.36
UBR5-207ENST00000520539 CACTINQ8WUQ7 758 aaKnown RBP17.32■□□□□ 0.36
UBR5-207ENST00000520539 NAPBQ9H115 298 aa17.32■□□□□ 0.36
UBR5-207ENST00000520539 TMEM232C9JQI7 657 aa17.31■□□□□ 0.36
UBR5-207ENST00000520539 ANO6Q4KMQ2 910 aa17.31■□□□□ 0.36
UBR5-207ENST00000520539 PYGLP06737 847 aa17.31■□□□□ 0.36
UBR5-207ENST00000520539 SKIP12755 728 aa17.31■□□□□ 0.36
UBR5-207ENST00000520539 LONP1P36776 959 aaKnown RBP17.31■□□□□ 0.36
UBR5-207ENST00000520539 PHBP35232 272 aa17.31■□□□□ 0.36
UBR5-207ENST00000520539 HAUS1Q96CS2 278 aa17.31■□□□□ 0.36
UBR5-207ENST00000520539 DAPK1P53355 1430 aa17.31■□□□□ 0.36
UBR5-207ENST00000520539 CCDC117Q8IWD4 279 aaPredicted RBP17.31■□□□□ 0.36
UBR5-207ENST00000520539 KIF1BPQ96EK5 621 aa17.31■□□□□ 0.36
UBR5-207ENST00000520539 TRIM55Q9BYV6 548 aa17.31■□□□□ 0.36
UBR5-207ENST00000520539 NOB1Q9ULX3 412 aaKnown RBP17.31■□□□□ 0.36
UBR5-207ENST00000520539 IDEP14735 1019 aa17.31■□□□□ 0.36
UBR5-207ENST00000520539 MYRIPQ8NFW9 859 aa17.31■□□□□ 0.36
UBR5-207ENST00000520539 ATP6V0A1Q93050 837 aa17.31■□□□□ 0.36
UBR5-207ENST00000520539 C16orf87Q6PH81 154 aa17.3■□□□□ 0.36
UBR5-207ENST00000520539 MX2P20592 715 aa17.3■□□□□ 0.36
UBR5-207ENST00000520539 HAUS7Q99871 368 aa17.3■□□□□ 0.36
UBR5-207ENST00000520539 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
UBR5-207ENST00000520539 FLOT1O75955 427 aa17.3■□□□□ 0.36
UBR5-207ENST00000520539 CCDC159P0C7I6 412 aa17.3■□□□□ 0.36
UBR5-207ENST00000520539 BRD3Q15059 726 aa17.3■□□□□ 0.36
UBR5-207ENST00000520539 FAM71BQ8TC56 605 aa17.3■□□□□ 0.36
UBR5-207ENST00000520539 LRP2BPQ9P2M1 347 aa17.3■□□□□ 0.36
UBR5-207ENST00000520539 ZBTB12Q9Y330 459 aaPredicted RBP17.3■□□□□ 0.36
UBR5-207ENST00000520539 HCLS1P14317 486 aaPredicted RBP17.3■□□□□ 0.36
UBR5-207ENST00000520539 CTAGE3PQ8IX95 158 aa17.3■□□□□ 0.36
UBR5-207ENST00000520539 RTL1A6NKG5 1358 aa17.3■□□□□ 0.36
UBR5-207ENST00000520539 EVCP57679 992 aa17.3■□□□□ 0.36
UBR5-207ENST00000520539 NME8Q8N427 588 aa17.3■□□□□ 0.36
UBR5-207ENST00000520539 EEF1DP29692 281 aaKnown RBP17.29■□□□□ 0.36
UBR5-207ENST00000520539 PSMD6Q15008 389 aa17.29■□□□□ 0.36
UBR5-207ENST00000520539 MKL2Q9ULH7 1088 aa17.29■□□□□ 0.36
UBR5-207ENST00000520539 PODNQ7Z5L7 613 aa17.29■□□□□ 0.36
UBR5-207ENST00000520539 ENAHQ8N8S7 591 aaPredicted RBP17.29■□□□□ 0.36
UBR5-207ENST00000520539 NOX5Q96PH1 765 aa17.29■□□□□ 0.36
UBR5-207ENST00000520539 CAPN7Q9Y6W3 813 aa17.29■□□□□ 0.36
UBR5-207ENST00000520539 TXLNGQ9NUQ3 528 aa17.29■□□□□ 0.36
UBR5-207ENST00000520539 ZNF449Q6P9G9 518 aa17.29■□□□□ 0.36
UBR5-207ENST00000520539 CCDC138Q96M89 665 aa17.29■□□□□ 0.36
UBR5-207ENST00000520539 BAIAP2L1Q9UHR4 511 aa17.29■□□□□ 0.36
UBR5-207ENST00000520539 GUCA1BQ9UMX6 200 aa17.29■□□□□ 0.36
UBR5-207ENST00000520539 RHOXF2BP0C7M4 288 aa17.29■□□□□ 0.36
UBR5-207ENST00000520539 SH3GL3Q99963 347 aa17.29■□□□□ 0.36
UBR5-207ENST00000520539 RHOXF2Q9BQY4 288 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms