RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 EAF1Q96JC9 268 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P46-201ENST00000520062 POP1Q99575 1024 aaKnown RBP8.07□□□□□ -1.12
HMGB1P46-201ENST00000520062 CLEC4MQ9H2X3 399 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P46-201ENST00000520062 TMEM39AQ9NV64 488 aa8.07□□□□□ -1.12
HMGB1P46-201ENST00000520062 SAMM50Q9Y512 469 aa8.07□□□□□ -1.12
HMGB1P46-201ENST00000520062 ADARB2-AS1A8MUL3 147 aa8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 GPR25O00155 361 aa8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 PF4P02776 101 aa8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 ARAFP10398 606 aa8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 SNRPBP14678 240 aaKnown RBP8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 SOX9P48436 509 aa8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 FAAP100Q0VG06 881 aa8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 CAMK2GQ13555 558 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 MAP3K11Q16584 847 aa8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 HFE2Q6ZVN8 426 aa8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 VWA5B2Q8N398 1253 aa8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 MUC3BQ9H195 1237 aa8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 IGFLR1Q9H665 355 aa8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 FRRS1LQ9P0K9 344 aa8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 GPN3Q9UHW5 284 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 SLC6A14Q9UN76 642 aa8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 ROBO2Q9HCK4 1378 aa8.06□□□□□ -1.12
HMGB1P46-201ENST00000520062 F6X3S4 739 aa8.05□□□□□ -1.12
HMGB1P46-201ENST00000520062 C2CD2LO14523 706 aa8.05□□□□□ -1.12
HMGB1P46-201ENST00000520062 B3GALT4O96024 378 aa8.05□□□□□ -1.12
HMGB1P46-201ENST00000520062 PTPRAP18433 802 aa8.05□□□□□ -1.12
HMGB1P46-201ENST00000520062 ADH6P28332 368 aa8.05□□□□□ -1.12
HMGB1P46-201ENST00000520062 SNAP47Q5SQN1 464 aa8.05□□□□□ -1.12
HMGB1P46-201ENST00000520062 NBPF6Q5VWK0 638 aa8.05□□□□□ -1.12
HMGB1P46-201ENST00000520062 CEP135Q66GS9 1140 aa8.05□□□□□ -1.12
HMGB1P46-201ENST00000520062 FAM35AQ86V20 835 aa8.05□□□□□ -1.12
HMGB1P46-201ENST00000520062 CACTIN-AS1Q8N1I8 211 aa8.05□□□□□ -1.12
HMGB1P46-201ENST00000520062 PLD4Q96BZ4 506 aa8.05□□□□□ -1.12
HMGB1P46-201ENST00000520062 NBPF4Q96M43 638 aa8.05□□□□□ -1.12
HMGB1P46-201ENST00000520062 ADAM19Q9H013 955 aa8.05□□□□□ -1.12
HMGB1P46-201ENST00000520062 SOX13Q9UN79 622 aa8.05□□□□□ -1.12
HMGB1P46-201ENST00000520062 TLR6Q9Y2C9 796 aa8.05□□□□□ -1.12
HMGB1P46-201ENST00000520062 SSBP05455 408 aaKnown RBP eCLIP8.04□□□□□ -1.12
HMGB1P46-201ENST00000520062 TFE3P19532 575 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P46-201ENST00000520062 TBC1D8BQ0IIM8 1120 aa8.04□□□□□ -1.12
HMGB1P46-201ENST00000520062 NFX1Q12986 1120 aaKnown RBP8.04□□□□□ -1.12
HMGB1P46-201ENST00000520062 PCNX4Q63HM2 1172 aa8.04□□□□□ -1.12
HMGB1P46-201ENST00000520062 SCARA3Q6AZY7 606 aa8.04□□□□□ -1.12
HMGB1P46-201ENST00000520062 TRIM42Q8IWZ5 723 aa8.04□□□□□ -1.12
HMGB1P46-201ENST00000520062 MICALL1Q8N3F8 863 aa8.04□□□□□ -1.12
HMGB1P46-201ENST00000520062 TTC9Q92623 222 aa8.04□□□□□ -1.12
HMGB1P46-201ENST00000520062 MDFIQ99750 246 aa8.04□□□□□ -1.12
HMGB1P46-201ENST00000520062 LRRC3Q9BY71 257 aa8.04□□□□□ -1.12
HMGB1P46-201ENST00000520062 EFR3BQ9Y2G0 817 aa8.04□□□□□ -1.12
HMGB1P46-201ENST00000520062 SMARCA5O60264 1052 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 PAGE1O75459 146 aa8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 MX2P20592 715 aa8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 NME2P22392 152 aa8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 ADH7P40394 386 aa8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 NASPP49321 788 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 PCBP4P57723 403 aaKnown RBP8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 PCDH1Q08174 1060 aa8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 APOBRQ0VD83 1088 aa8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 CCDC144BQ3MJ40 725 aa8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 PERM1Q5SV97 790 aa8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 FAM196AQ6ZSG2 479 aa8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 CKAP2LQ8IYA6 745 aa8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 GOLM1Q8NBJ4 401 aa8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 IRX2Q9BZI1 471 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 GINM1Q9NU53 330 aa8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 CYP8B1Q9UNU6 501 aa8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 NSFL1CQ9UNZ2 370 aaKnown RBP8.03□□□□□ -1.12
HMGB1P46-201ENST00000520062 CADPSQ9ULU8 1353 aa8.02□□□□□ -1.13
HMGB1P46-201ENST00000520062 FAM177BA6PVY3 158 aa8.02□□□□□ -1.13
HMGB1P46-201ENST00000520062 C11orf95C9JLR9 678 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P46-201ENST00000520062 CPB1P15086 417 aa8.02□□□□□ -1.13
HMGB1P46-201ENST00000520062 MAP2K3P46734 347 aa8.02□□□□□ -1.13
HMGB1P46-201ENST00000520062 FAM160A1Q05DH4 1040 aa8.02□□□□□ -1.13
HMGB1P46-201ENST00000520062 DIEXFQ68CQ4 756 aaKnown RBP8.02□□□□□ -1.13
HMGB1P46-201ENST00000520062 ELMSAN1Q6PJG2 1045 aa8.02□□□□□ -1.13
HMGB1P46-201ENST00000520062 VN1R5Q7Z5H4 357 aa8.02□□□□□ -1.13
HMGB1P46-201ENST00000520062 SLITRK4Q8IW52 837 aa8.02□□□□□ -1.13
HMGB1P46-201ENST00000520062 NAGPAQ9UK23 515 aa8.02□□□□□ -1.13
HMGB1P46-201ENST00000520062 EIF4EBP3O60516 100 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P46-201ENST00000520062 LMNB1P20700 586 aa8.01□□□□□ -1.13
HMGB1P46-201ENST00000520062 LRRC14Q15048 493 aa8.01□□□□□ -1.13
HMGB1P46-201ENST00000520062 GIMAP6Q6P9H5 292 aa8.01□□□□□ -1.13
HMGB1P46-201ENST00000520062 PMFBP1Q8TBY8 1022 aa8.01□□□□□ -1.13
HMGB1P46-201ENST00000520062 DDX54Q8TDD1 881 aaKnown RBP8.01□□□□□ -1.13
HMGB1P46-201ENST00000520062 NKD1Q969G9 470 aa8.01□□□□□ -1.13
HMGB1P46-201ENST00000520062 LPIN3Q9BQK8 851 aa8.01□□□□□ -1.13
HMGB1P46-201ENST00000520062 EMILIN2Q9BXX0 1053 aa8.01□□□□□ -1.13
HMGB1P46-201ENST00000520062 SMG9Q9H0W8 520 aaKnown RBP8.01□□□□□ -1.13
HMGB1P46-201ENST00000520062 MIR1-1HGQ9H1L0 117 aa8.01□□□□□ -1.13
HMGB1P46-201ENST00000520062 OSBPL2Q9H1P3 480 aa8.01□□□□□ -1.13
HMGB1P46-201ENST00000520062 UBP1Q9NZI7 540 aa8.01□□□□□ -1.13
HMGB1P46-201ENST00000520062 KLF15Q9UIH9 416 aa8.01□□□□□ -1.13
HMGB1P46-201ENST00000520062 BMP6P22004 513 aa8□□□□□ -1.13
HMGB1P46-201ENST00000520062 ZNF423Q2M1K9 1284 aa8□□□□□ -1.13
HMGB1P46-201ENST00000520062 GATAD2BQ8WXI9 593 aa8□□□□□ -1.13
HMGB1P46-201ENST00000520062 ZNF408Q9H9D4 720 aa8□□□□□ -1.13
HMGB1P46-201ENST00000520062 MBIPQ9NS73 344 aa8□□□□□ -1.13
HMGB1P46-201ENST00000520062 ELOA3CA0A087WX78 387 aaPredicted RBP7.99□□□□□ -1.13
HMGB1P46-201ENST00000520062 ELOA3DA6NLF2 546 aaPredicted RBP7.99□□□□□ -1.13
HMGB1P46-201ENST00000520062 ESRRAP11474 423 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms