RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 EXOSC6Q5RKV6 272 aaKnown RBP3.67□□□□□ -1.82
RNU2-56P-201ENST00000516826 TTC39BQ5VTQ0 682 aaPredicted RBP3.67□□□□□ -1.82
RNU2-56P-201ENST00000516826 TTLL10Q6ZVT0 673 aa3.67□□□□□ -1.82
RNU2-56P-201ENST00000516826 C1QL4Q86Z23 238 aa3.67□□□□□ -1.82
RNU2-56P-201ENST00000516826 WFDC3Q8IUB2 231 aa3.67□□□□□ -1.82
RNU2-56P-201ENST00000516826 FAM13BQ9NYF5 915 aa3.67□□□□□ -1.82
RNU2-56P-201ENST00000516826 FAM170BA6NMN3 283 aa3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 UBAP1LF5GYI3 381 aa3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 EIF4EBP3O60516 100 aaPredicted RBP3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 FUT4P22083 530 aa3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 SCNN1AP37088 669 aa3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 BUD31P41223 144 aaPredicted RBP3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 NLRP12P59046 1061 aa3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 C19orf57Q0VDD7 668 aa3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 TRIP4Q15650 581 aaPredicted RBP3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 CDPF1Q6NVV7 123 aa3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 LARP1Q6PKG0 1096 aaKnown RBP3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 SPRED2Q7Z698 418 aa3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 ADAMTS19Q8TE59 1207 aa3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 FBLIM1Q8WUP2 373 aa3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 PIK3R5Q8WYR1 880 aa3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 VTI1AQ96AJ9 217 aa3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 FNDC3AQ9Y2H6 1198 aaKnown RBP3.66□□□□□ -1.82
RNU2-56P-201ENST00000516826 TSPAN15O95858 294 aa3.65□□□□□ -1.83
RNU2-56P-201ENST00000516826 PTK7Q13308 1070 aa3.65□□□□□ -1.83
RNU2-56P-201ENST00000516826 HDGFL1Q5TGJ6 251 aa3.65□□□□□ -1.83
RNU2-56P-201ENST00000516826 LCNL1Q6ZST4 164 aa3.65□□□□□ -1.83
RNU2-56P-201ENST00000516826 AMIGO3Q86WK7 504 aa3.65□□□□□ -1.83
RNU2-56P-201ENST00000516826 C2CD4AQ8NCU7 369 aaPredicted RBP3.65□□□□□ -1.83
RNU2-56P-201ENST00000516826 PPP1R16BQ96T49 567 aa3.65□□□□□ -1.83
RNU2-56P-201ENST00000516826 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.83
RNU2-56P-201ENST00000516826 BRD2P25440 801 aaKnown RBP3.64□□□□□ -1.83
RNU2-56P-201ENST00000516826 SOX4Q06945 474 aaPredicted RBP3.64□□□□□ -1.83
RNU2-56P-201ENST00000516826 DPYDQ12882 1025 aa3.64□□□□□ -1.83
RNU2-56P-201ENST00000516826 MAP7Q14244 749 aa3.64□□□□□ -1.83
RNU2-56P-201ENST00000516826 COX20Q5RI15 118 aa3.64□□□□□ -1.83
RNU2-56P-201ENST00000516826 NCAPG2Q86XI2 1143 aa3.64□□□□□ -1.83
RNU2-56P-201ENST00000516826 SOX17Q9H6I2 414 aaPredicted RBP3.64□□□□□ -1.83
RNU2-56P-201ENST00000516826 RC3H2Q9HBD1 1191 aaKnown RBP3.64□□□□□ -1.83
RNU2-56P-201ENST00000516826 LRRC4CQ9HCJ2 640 aa3.64□□□□□ -1.83
RNU2-56P-201ENST00000516826 MBNL3Q9NUK0 354 aaKnown RBP3.64□□□□□ -1.83
RNU2-56P-201ENST00000516826 JAG2Q9Y219 1238 aa3.64□□□□□ -1.83
RNU2-56P-201ENST00000516826 LOC100289279A0A1B0GTE1 492 aa3.63□□□□□ -1.83
RNU2-56P-201ENST00000516826 LRRC10BA6NIK2 292 aa3.63□□□□□ -1.83
RNU2-56P-201ENST00000516826 NFKBIEO00221 500 aa3.63□□□□□ -1.83
RNU2-56P-201ENST00000516826 RNASE1P07998 156 aaKnown RBP3.63□□□□□ -1.83
RNU2-56P-201ENST00000516826 OGFOD3Q6PK18 319 aa3.63□□□□□ -1.83
RNU2-56P-201ENST00000516826 ZNF765Q7L2R6 523 aa3.63□□□□□ -1.83
RNU2-56P-201ENST00000516826 ANKLE2Q86XL3 938 aa3.63□□□□□ -1.83
RNU2-56P-201ENST00000516826 ANKMY2Q8IV38 441 aa3.63□□□□□ -1.83
RNU2-56P-201ENST00000516826 ETFBKMTQ8IXQ9 262 aa3.63□□□□□ -1.83
RNU2-56P-201ENST00000516826 LRRC56Q8IYG6 542 aaPredicted RBP3.63□□□□□ -1.83
RNU2-56P-201ENST00000516826 ABI2Q9NYB9 513 aaPredicted RBP3.63□□□□□ -1.83
RNU2-56P-201ENST00000516826 VAV3Q9UKW4 847 aa3.63□□□□□ -1.83
RNU2-56P-201ENST00000516826 SOX13Q9UN79 622 aa3.63□□□□□ -1.83
RNU2-56P-201ENST00000516826 GTF3C3Q9Y5Q9 886 aa3.63□□□□□ -1.83
RNU2-56P-201ENST00000516826 FAM196BA6NMK8 535 aa3.62□□□□□ -1.83
RNU2-56P-201ENST00000516826 SOX1O00570 391 aaPredicted RBP3.62□□□□□ -1.83
RNU2-56P-201ENST00000516826 ZSCAN22P10073 491 aaPredicted RBP3.62□□□□□ -1.83
RNU2-56P-201ENST00000516826 DRD2P14416 443 aa3.62□□□□□ -1.83
RNU2-56P-201ENST00000516826 ZNF574Q6ZN55 896 aaPredicted RBP3.62□□□□□ -1.83
RNU2-56P-201ENST00000516826 FLAD1Q8NFF5 587 aa3.62□□□□□ -1.83
RNU2-56P-201ENST00000516826 PI4K2BQ8TCG2 481 aa3.62□□□□□ -1.83
RNU2-56P-201ENST00000516826 SLC7A3Q8WY07 619 aa3.62□□□□□ -1.83
RNU2-56P-201ENST00000516826 SALL4Q9UJQ4 1053 aa3.62□□□□□ -1.83
RNU2-56P-201ENST00000516826 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 A6NJR5 290 aa3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 POM121CA8CG34 1229 aa3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 PDE2AO00408 941 aaPredicted RBP3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 LGR5O75473 907 aa3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 DLGAP3O95886 979 aa3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 CD8BP10966 210 aa3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 KANK4Q5T7N3 995 aaPredicted RBP3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 PDE12Q6L8Q7 609 aaKnown RBP3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 SEZ6L2Q6UXD5 910 aa3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 FNBP4Q8N3X1 1017 aaPredicted RBP3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 LRRN4CLQ8ND94 238 aa3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 DZANK1Q9NVP4 752 aa3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 LMCD1Q9NZU5 365 aa3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 ADAMTS6Q9UKP5 1117 aa3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 MAFBQ9Y5Q3 323 aaPredicted RBP3.61□□□□□ -1.83
RNU2-56P-201ENST00000516826 ZNF503-AS2A6NEH8 195 aa3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 CYP2E1P05181 493 aaPredicted RBP3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 NFICP08651 508 aa3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 PRKCQQ04759 706 aa3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 BNIP3Q12983 259 aa3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 CYP27C1Q4G0S4 372 aa3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 HGSNATQ68CP4 663 aa3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 ZSWIM9Q86XI8 627 aa3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 TMEM102Q8N9M5 508 aaPredicted RBP3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 NETO1Q8TDF5 533 aa3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 BSNDQ8WZ55 320 aa3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 POM121Q96HA1 1249 aa3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 ARXQ96QS3 562 aa3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 SEMA6CQ9H3T2 930 aa3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 ACSS3Q9H6R3 686 aa3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 C1GALT1Q9NS00 363 aa3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 TFIP11Q9UBB9 837 aaKnown RBP3.6□□□□□ -1.83
RNU2-56P-201ENST00000516826 USP17L15C9J2P7 530 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms