RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 MUM1L1Q5H9M0 696 aa8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 CAVIN1Q6NZI2 390 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 RASEFQ8IZ41 740 aa8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 SPG7Q9UQ90 795 aa8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 GLRX3O76003 335 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 OATP04181 439 aa8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 EPHA10Q5JZY3 1008 aa8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 CCDC191Q8NCU4 936 aa8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 INTS4Q96HW7 963 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 CHCHD3Q9NX63 227 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 LCMT1Q9UIC8 334 aa8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 USP16Q9Y5T5 823 aa8.69□□□□□ -1.02
PDLIM5-219ENST00000514743 NHSL1Q5SYE7 1610 aa8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 PPFIA2O75334 1257 aa8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 MYL6BP14649 208 aa8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 CLASRPQ8N2M8 674 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 GPT2Q8TD30 523 aa8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 XAGE3Q8WTP9 111 aa8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 EAF2Q96CJ1 260 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 DCAF5Q96JK2 942 aa8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 TEX13AQ9BXU3 409 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 ECHDC1Q9NTX5 307 aa8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 TLR7Q9NYK1 1049 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 RBM27Q9P2N5 1060 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 LAMA4Q16363 1823 aa8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 RPAP1Q9BWH6 1393 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 COL5A2P05997 1499 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 DDX58O95786 925 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 GCKRQ14397 625 aa8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 CWC27Q6UX04 472 aaKnown RBP8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 KRBA2Q6ZNG9 492 aa8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 COPS6Q7L5N1 327 aa8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 PACS2Q86VP3 889 aa8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 CXorf38Q8TB03 319 aa8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 METTL22Q9BUU2 404 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 DIAPH3Q9NSV4 1193 aa8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 COL15A1P39059 1388 aa8.68□□□□□ -1.02
PDLIM5-219ENST00000514743 PRPF40AO75400 957 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 PIP4K2AP48426 406 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 ADCY2Q08462 1091 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 ERC1Q8IUD2 1116 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 KLHDC4Q8TBB5 520 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 DTNBO60941 627 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 PTH1RQ03431 593 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 LARP1Q6PKG0 1096 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 KCNB2Q92953 911 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 ITGB4P16144 1822 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 TESPA1A2RU30 521 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 SMAPO00193 183 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 STK25O00506 426 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 RFX5P48382 616 aaPredicted RBP8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 TRAF1Q13077 416 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 BMS1Q14692 1282 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 ARMC3Q5W041 872 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 RIC3Q7Z5B4 369 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 AACSQ86V21 672 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 TXLNBQ8N3L3 684 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 KIF18AQ8NI77 898 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 PDLIM2Q96JY6 352 aa8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 NSFL1CQ9UNZ2 370 aaKnown RBP8.67□□□□□ -1.02
PDLIM5-219ENST00000514743 JCADQ9P266 1359 aa8.66□□□□□ -1.02
PDLIM5-219ENST00000514743 BRINP3Q76B58 766 aa8.66□□□□□ -1.02
PDLIM5-219ENST00000514743 SUGP1Q8IWZ8 645 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-219ENST00000514743 MYD88Q99836 296 aa8.66□□□□□ -1.02
PDLIM5-219ENST00000514743 SNRKQ9NRH2 765 aa8.66□□□□□ -1.02
PDLIM5-219ENST00000514743 TPM1P09493 284 aa8.66□□□□□ -1.02
PDLIM5-219ENST00000514743 SNRPA1P09661 255 aaKnown RBP8.66□□□□□ -1.02
PDLIM5-219ENST00000514743 CASP7P55210 303 aa8.66□□□□□ -1.02
PDLIM5-219ENST00000514743 ZNF445P59923 1031 aa8.66□□□□□ -1.02
PDLIM5-219ENST00000514743 NEK11Q8NG66 645 aa8.66□□□□□ -1.02
PDLIM5-219ENST00000514743 TATDN2Q93075 761 aa8.66□□□□□ -1.02
PDLIM5-219ENST00000514743 RIOK3O14730 519 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 IFIT2P09913 472 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 CSB-PGBD3P0DP91 1061 aa8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 RUFY3Q7L099 469 aa8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 RPUSD2Q8IZ73 545 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 FMNL2Q96PY5 1086 aa8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 RRP15Q9Y3B9 282 aaKnown RBP8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 TMCO5BA8MYB1 307 aa8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 SMC2O95347 1197 aa8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 HSPA2P54652 639 aa8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 AK2P54819 239 aa8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 ADCK5Q3MIX3 580 aa8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 ZSCAN23Q3MJ62 389 aa8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 RABL6Q3YEC7 729 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 ANKRD13DQ6ZTN6 518 aa8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 ARL10Q8N8L6 244 aa8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 CCDC8Q9H0W5 538 aaPredicted RBP8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 ATG3Q9NT62 314 aa8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 TNS2Q63HR2 1409 aa8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 MED23Q9ULK4 1368 aa8.65□□□□□ -1.02
PDLIM5-219ENST00000514743 KIF4AO95239 1232 aa8.65□□□□□ -1.03
PDLIM5-219ENST00000514743 LARGE1O95461 756 aa8.65□□□□□ -1.03
PDLIM5-219ENST00000514743 CPA1P15085 419 aa8.65□□□□□ -1.03
PDLIM5-219ENST00000514743 MAGEA8P43361 318 aa8.65□□□□□ -1.03
PDLIM5-219ENST00000514743 COL9A3Q14050 684 aaPredicted RBP8.65□□□□□ -1.03
PDLIM5-219ENST00000514743 NECTIN1Q15223 517 aa8.65□□□□□ -1.03
PDLIM5-219ENST00000514743 TTLL5Q6EMB2 1281 aa8.65□□□□□ -1.03
PDLIM5-219ENST00000514743 SRLQ86TD4 932 aa8.65□□□□□ -1.03
PDLIM5-219ENST00000514743 CEP89Q96ST8 783 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms