RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 MAST2Q6P0Q8 1798 aa9.99□□□□□ -0.81
RNF4-220ENST00000513578 TCRBV5S4A2TA0A5A2 114 aa9.99□□□□□ -0.81
RNF4-220ENST00000513578 CYP21A2P08686 494 aa9.99□□□□□ -0.81
RNF4-220ENST00000513578 PDIA4P13667 645 aaKnown RBP9.99□□□□□ -0.81
RNF4-220ENST00000513578 CRY2Q49AN0 593 aa9.99□□□□□ -0.81
RNF4-220ENST00000513578 BLOC1S2Q6QNY1 142 aa9.99□□□□□ -0.81
RNF4-220ENST00000513578 SMIM5Q71RC9 77 aa9.99□□□□□ -0.81
RNF4-220ENST00000513578 FBXL16Q8N461 479 aa9.99□□□□□ -0.81
RNF4-220ENST00000513578 FLAD1Q8NFF5 587 aa9.99□□□□□ -0.81
RNF4-220ENST00000513578 HELBQ8NG08 1087 aaPredicted RBP9.99□□□□□ -0.81
RNF4-220ENST00000513578 CELF1Q92879 486 aaKnown RBP9.99□□□□□ -0.81
RNF4-220ENST00000513578 TNPO1Q92973 898 aaKnown RBP9.99□□□□□ -0.81
RNF4-220ENST00000513578 AKT1S1Q96B36 256 aa9.99□□□□□ -0.81
RNF4-220ENST00000513578 GBP4Q96PP9 640 aa9.99□□□□□ -0.81
RNF4-220ENST00000513578 PIH1D3Q9NQM4 214 aaKnown RBP9.99□□□□□ -0.81
RNF4-220ENST00000513578 GNL3LQ9NVN8 582 aaKnown RBP9.99□□□□□ -0.81
RNF4-220ENST00000513578 ANKRD31Q8N7Z5 1873 aa9.99□□□□□ -0.81
RNF4-220ENST00000513578 ZMYM6O95789 1325 aa9.99□□□□□ -0.81
RNF4-220ENST00000513578 KLRG2A4D1S0 409 aaPredicted RBP9.98□□□□□ -0.81
RNF4-220ENST00000513578 DDX11L8A8MPP1 907 aa9.98□□□□□ -0.81
RNF4-220ENST00000513578 M0R2C6 588 aa9.98□□□□□ -0.81
RNF4-220ENST00000513578 MAP3K12Q12852 859 aa9.98□□□□□ -0.81
RNF4-220ENST00000513578 RASGRF1Q13972 1273 aa9.98□□□□□ -0.81
RNF4-220ENST00000513578 ALX1Q15699 326 aa9.98□□□□□ -0.81
RNF4-220ENST00000513578 PRR5LQ6MZQ0 368 aa9.98□□□□□ -0.81
RNF4-220ENST00000513578 CCDC129Q6ZRS4 1044 aa9.98□□□□□ -0.81
RNF4-220ENST00000513578 C15orf52Q6ZUT6 534 aaKnown RBP9.98□□□□□ -0.81
RNF4-220ENST00000513578 FBXO33Q7Z6M2 555 aa9.98□□□□□ -0.81
RNF4-220ENST00000513578 CNBD1Q8NA66 436 aa9.98□□□□□ -0.81
RNF4-220ENST00000513578 NEK1Q96PY6 1258 aa9.98□□□□□ -0.81
RNF4-220ENST00000513578 CACNA1SQ13698 1873 aa9.98□□□□□ -0.81
RNF4-220ENST00000513578 DUOX1Q9NRD9 1551 aa9.97□□□□□ -0.81
RNF4-220ENST00000513578 FOXP2O15409 715 aa9.97□□□□□ -0.81
RNF4-220ENST00000513578 PHF14O94880 888 aa9.97□□□□□ -0.81
RNF4-220ENST00000513578 CHGBP05060 677 aa9.97□□□□□ -0.81
RNF4-220ENST00000513578 SERPINB2P05120 415 aa9.97□□□□□ -0.81
RNF4-220ENST00000513578 PDE6AP16499 860 aa9.97□□□□□ -0.81
RNF4-220ENST00000513578 HOXA10P31260 410 aaPredicted RBP9.97□□□□□ -0.81
RNF4-220ENST00000513578 GRAPQ13588 217 aa9.97□□□□□ -0.81
RNF4-220ENST00000513578 WASHC4Q2M389 1173 aa9.97□□□□□ -0.81
RNF4-220ENST00000513578 CAVIN4Q5BKX8 364 aa9.97□□□□□ -0.81
RNF4-220ENST00000513578 SLC9C2Q5TAH2 1124 aa9.97□□□□□ -0.81
RNF4-220ENST00000513578 PI16Q6UXB8 463 aa9.97□□□□□ -0.81
RNF4-220ENST00000513578 ZGPATQ8N5A5 531 aaKnown RBP9.97□□□□□ -0.81
RNF4-220ENST00000513578 GRAPLQ8TC17 118 aaPredicted RBP9.97□□□□□ -0.81
RNF4-220ENST00000513578 AGXT2Q9BYV1 514 aa9.97□□□□□ -0.81
RNF4-220ENST00000513578 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.97□□□□□ -0.81
RNF4-220ENST00000513578 WDR19Q8NEZ3 1342 aa9.97□□□□□ -0.81
RNF4-220ENST00000513578 IRS2Q9Y4H2 1338 aa9.97□□□□□ -0.81
RNF4-220ENST00000513578 LTBP1Q14766 1721 aa9.96□□□□□ -0.81
RNF4-220ENST00000513578 TIAM2Q8IVF5 1701 aa9.96□□□□□ -0.81
RNF4-220ENST00000513578 GPAA1O43292 621 aa9.96□□□□□ -0.82
RNF4-220ENST00000513578 BCAMP50895 628 aa9.96□□□□□ -0.82
RNF4-220ENST00000513578 ST5P78524 1137 aa9.96□□□□□ -0.82
RNF4-220ENST00000513578 EXOSC10Q01780 885 aaKnown RBP9.96□□□□□ -0.82
RNF4-220ENST00000513578 DHX32Q7L7V1 743 aaKnown RBP9.96□□□□□ -0.82
RNF4-220ENST00000513578 TMC4Q7Z404 712 aa9.96□□□□□ -0.82
RNF4-220ENST00000513578 NLGN1Q8N2Q7 840 aa9.96□□□□□ -0.82
RNF4-220ENST00000513578 FAM84BQ96KN1 310 aaPredicted RBP9.96□□□□□ -0.82
RNF4-220ENST00000513578 PUS7LQ9H0K6 701 aaKnown RBP9.96□□□□□ -0.82
RNF4-220ENST00000513578 DENND2AQ9ULE3 1009 aa9.96□□□□□ -0.82
RNF4-220ENST00000513578 LEMD3Q9Y2U8 911 aa9.96□□□□□ -0.82
RNF4-220ENST00000513578 PNPLA7Q6ZV29 1317 aa9.96□□□□□ -0.82
RNF4-220ENST00000513578 ZNF532Q9HCE3 1301 aa9.96□□□□□ -0.82
RNF4-220ENST00000513578 POLRMTO00411 1230 aaKnown RBP9.95□□□□□ -0.82
RNF4-220ENST00000513578 IDH1O75874 414 aaKnown RBP9.95□□□□□ -0.82
RNF4-220ENST00000513578 BRD1O95696 1058 aa9.95□□□□□ -0.82
RNF4-220ENST00000513578 APBA3O96018 575 aa9.95□□□□□ -0.82
RNF4-220ENST00000513578 GNAT2P19087 354 aa9.95□□□□□ -0.82
RNF4-220ENST00000513578 TOB2Q14106 344 aaPredicted RBP9.95□□□□□ -0.82
RNF4-220ENST00000513578 IMMTQ16891 758 aaKnown RBP9.95□□□□□ -0.82
RNF4-220ENST00000513578 SLFNL1Q499Z3 407 aa9.95□□□□□ -0.82
RNF4-220ENST00000513578 STOX1Q6ZVD7 989 aa9.95□□□□□ -0.82
RNF4-220ENST00000513578 CHMP4CQ96CF2 233 aa9.95□□□□□ -0.82
RNF4-220ENST00000513578 CRAMP1Q96RY5 1269 aa9.95□□□□□ -0.82
RNF4-220ENST00000513578 STRBPQ96SI9 672 aaKnown RBP9.95□□□□□ -0.82
RNF4-220ENST00000513578 FOXD4L1Q9NU39 408 aa9.95□□□□□ -0.82
RNF4-220ENST00000513578 ZDHHC9Q9Y397 364 aa9.95□□□□□ -0.82
RNF4-220ENST00000513578 TAF6LQ9Y6J9 622 aa9.95□□□□□ -0.82
RNF4-220ENST00000513578 COL1A1P02452 1464 aaPredicted RBP9.94□□□□□ -0.82
RNF4-220ENST00000513578 XDHP47989 1333 aa9.94□□□□□ -0.82
RNF4-220ENST00000513578 PATL2C9JE40 543 aaKnown RBP9.94□□□□□ -0.82
RNF4-220ENST00000513578 E7EWF7 191 aa9.94□□□□□ -0.82
RNF4-220ENST00000513578 SNAP23O00161 211 aa9.94□□□□□ -0.82
RNF4-220ENST00000513578 BBOX1O75936 387 aa9.94□□□□□ -0.82
RNF4-220ENST00000513578 FGAP02671 866 aa9.94□□□□□ -0.82
RNF4-220ENST00000513578 CPA1P15085 419 aa9.94□□□□□ -0.82
RNF4-220ENST00000513578 EVCP57679 992 aa9.94□□□□□ -0.82
RNF4-220ENST00000513578 DDR1Q08345 913 aa9.94□□□□□ -0.82
RNF4-220ENST00000513578 ME3Q16798 604 aa9.94□□□□□ -0.82
RNF4-220ENST00000513578 SKOR2Q2VWA4 1001 aaPredicted RBP9.94□□□□□ -0.82
RNF4-220ENST00000513578 RBM17Q96I25 401 aaKnown RBP9.94□□□□□ -0.82
RNF4-220ENST00000513578 WWC3Q9ULE0 1092 aa9.94□□□□□ -0.82
RNF4-220ENST00000513578 WDR33Q9C0J8 1336 aaKnown RBP9.93□□□□□ -0.82
RNF4-220ENST00000513578 SALL1Q9NSC2 1324 aa9.93□□□□□ -0.82
RNF4-220ENST00000513578 GOLGA6L22H0YM25 854 aa9.93□□□□□ -0.82
RNF4-220ENST00000513578 NPHP1O15259 732 aa9.93□□□□□ -0.82
RNF4-220ENST00000513578 BAG4O95429 457 aaKnown RBP9.93□□□□□ -0.82
RNF4-220ENST00000513578 LARGE1O95461 756 aa9.93□□□□□ -0.82
RNF4-220ENST00000513578 HIBADHP31937 336 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms