RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 HSP90AA4PQ58FG1 418 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 PPP1R14CQ8TAE6 165 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 TBC1D5Q92609 795 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 SEC62Q99442 399 aaKnown RBP8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 BAIAP2L1Q9UHR4 511 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 FAM184BQ9ULE4 1060 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 NPC1L1Q9UHC9 1359 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 PTPDC1A2A3K4 754 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 SLFNL1Q499Z3 407 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 STXBP4Q6ZWJ1 553 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 ZNF365Q70YC5 407 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 TAOK1Q7L7X3 1001 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 JAKMIP2Q96AA8 810 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 NUP58Q9BVL2 599 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 SUDS3Q9H7L9 328 aaPredicted RBP8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 LRP2BPQ9P2M1 347 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 GRIN2BQ13224 1484 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 ARHGEF12Q9NZN5 1544 aa8.25□□□□□ -1.09
UBE2D3-224ENST00000508474 ZBTB7BO15156 539 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 ZBTB43O43298 467 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 MYL6BP14649 208 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 MMS22LQ6ZRQ5 1243 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 PHLDB2Q86SQ0 1253 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 RAB11FIP4Q86YS3 637 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 BCAS4Q8TDM0 211 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 DDX41Q9UJV9 622 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 PHLPP2Q6ZVD8 1323 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 E7EVH7 732 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 HNRNPH2P55795 449 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 MAP7Q14244 749 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 KRI1Q8N9T8 703 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 RAB3IPQ96QF0 476 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 PYCARDQ9ULZ3 195 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 USH1CQ9Y6N9 552 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 TTC21BQ7Z4L5 1316 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 CTNNA2P26232 953 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 ARID4AP29374 1257 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 RASSF2P50749 326 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 ZKSCAN8Q15776 578 aaPredicted RBP8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 DHX32Q7L7V1 743 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 IQCDQ96DY2 449 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 TACO1Q9BSH4 297 aaKnown RBP8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 TNNQ9UQP3 1299 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 TRIM75PA6NK02 468 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 ERCC3P19447 782 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 CLUL1Q15846 466 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 WWC2Q6AWC2 1192 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 SND1Q7KZF4 910 aaKnown RBP eCLIP8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 MICU3Q86XE3 530 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 TBC1D31Q96DN5 1066 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 GBP5Q96PP8 586 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 MIS18AQ9NYP9 233 aa8.24□□□□□ -1.09
UBE2D3-224ENST00000508474 TLDC2A0PJX2 215 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 ACTN4O43707 911 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 KRT13P13646 458 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 CALCOCO2Q13137 446 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 TDRD7Q8NHU6 1098 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 SECISBP2LQ93073 1101 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 PPP1R12CQ9BZL4 782 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 KRT23Q9C075 422 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 CNNM2Q9H8M5 875 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 RIPOR2Q9Y4F9 1068 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 THOC2Q8NI27 1593 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 ZNF853P0CG23 659 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 FERP16591 822 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 METTL24Q5JXM2 366 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 FYB2Q5VWT5 728 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 NAA16Q6N069 864 aaPredicted RBP8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 KCNK9Q9NPC2 374 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 SPTLC3Q9NUV7 552 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 KIF24Q5T7B8 1368 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 A0A1B0GVL5 298 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 MYO1CO00159 1063 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 HIP1RO75146 1068 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 RPS6KB1P23443 525 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 NMIQ13287 307 aaPredicted RBP8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 FBXO18Q8NFZ0 1043 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 DHX58Q96C10 678 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 MMRN2Q9H8L6 949 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 ODF2LQ9ULJ1 636 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 LRRD1A4D1F6 860 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 VAMP4O75379 141 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 ZNF76P36508 570 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 CABP4P57796 275 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 TMEM132AQ24JP5 1023 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 GRIPAP1Q4V328 841 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 LARSQ9P2J5 1176 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 CCDC61Q9Y6R9 512 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 PRAG1Q86YV5 1406 aa8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 CDK13Q14004 1512 aaKnown RBP8.23□□□□□ -1.09
UBE2D3-224ENST00000508474 MACROD2A1Z1Q3 448 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 CCDC151A5D8V7 595 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 ALDH1L1O75891 902 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 TCERG1LQ5VWI1 586 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 XPO4Q9C0E2 1151 aaKnown RBP8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 PDE11AQ9HCR9 933 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 ANAPC4Q9UJX5 808 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 MTUS1Q9ULD2 1270 aa8.22□□□□□ -1.09
UBE2D3-224ENST00000508474 MFSD6Q6ZSS7 791 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms