RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 C4BP0C0L5 1744 aa26.32■■□□□ 1.8
RNF4-207ENST00000506706 F13A1P00488 732 aa26.32■■□□□ 1.8
RNF4-207ENST00000506706 STK3Q13188 491 aa26.32■■□□□ 1.8
RNF4-207ENST00000506706 BRF1Q92994 677 aa26.32■■□□□ 1.8
RNF4-207ENST00000506706 BCL11BQ9C0K0 894 aaPredicted RBP26.32■■□□□ 1.8
RNF4-207ENST00000506706 ATP6V1DQ9Y5K8 247 aa26.32■■□□□ 1.8
RNF4-207ENST00000506706 BCAMP50895 628 aa26.31■■□□□ 1.8
RNF4-207ENST00000506706 GTF3C6Q969F1 213 aa26.31■■□□□ 1.8
RNF4-207ENST00000506706 NLRP3Q96P20 1036 aa26.31■■□□□ 1.8
RNF4-207ENST00000506706 MAP3K12Q12852 859 aa26.3■■□□□ 1.8
RNF4-207ENST00000506706 TPTE2Q6XPS3 522 aa26.3■■□□□ 1.8
RNF4-207ENST00000506706 AEBP2Q6ZN18 517 aaPredicted RBP26.3■■□□□ 1.8
RNF4-207ENST00000506706 LRRC2Q9BYS8 371 aa26.3■■□□□ 1.8
RNF4-207ENST00000506706 WWC3Q9ULE0 1092 aa26.3■■□□□ 1.8
RNF4-207ENST00000506706 MTMR6Q9Y217 621 aa26.3■■□□□ 1.8
RNF4-207ENST00000506706 DOCK2Q92608 1830 aa26.3■■□□□ 1.8
RNF4-207ENST00000506706 TCRBV5S4A2TA0A5A2 114 aa26.3■■□□□ 1.8
RNF4-207ENST00000506706 PDCP20941 246 aa26.3■■□□□ 1.8
RNF4-207ENST00000506706 GPT2Q8TD30 523 aa26.3■■□□□ 1.8
RNF4-207ENST00000506706 AGXT2Q9BYV1 514 aa26.3■■□□□ 1.8
RNF4-207ENST00000506706 QTRT2Q9H974 415 aaKnown RBP26.3■■□□□ 1.8
RNF4-207ENST00000506706 FOXD4L6Q3SYB3 417 aaPredicted RBP26.29■■□□□ 1.8
RNF4-207ENST00000506706 TRAPPC3LQ5T215 181 aa26.29■■□□□ 1.8
RNF4-207ENST00000506706 FOXD4L3Q6VB84 417 aaPredicted RBP26.29■■□□□ 1.8
RNF4-207ENST00000506706 AMIGO3Q86WK7 504 aa26.29■■□□□ 1.8
RNF4-207ENST00000506706 A0A1B0GUL6 1792 aa26.29■■□□□ 1.8
RNF4-207ENST00000506706 DTNBO60941 627 aa26.29■■□□□ 1.8
RNF4-207ENST00000506706 RFC4P35249 363 aa26.29■■□□□ 1.8
RNF4-207ENST00000506706 LARP1BQ659C4 914 aaKnown RBP26.29■■□□□ 1.8
RNF4-207ENST00000506706 MBD3O95983 291 aa26.28■■□□□ 1.8
RNF4-207ENST00000506706 UBE4AQ14139 1066 aa26.28■■□□□ 1.8
RNF4-207ENST00000506706 CAVIN1Q6NZI2 390 aaKnown RBP26.28■■□□□ 1.8
RNF4-207ENST00000506706 TAF1P21675 1872 aa26.28■■□□□ 1.8
RNF4-207ENST00000506706 ZNF213O14771 459 aa26.27■■□□□ 1.8
RNF4-207ENST00000506706 HAND2P61296 217 aa26.27■■□□□ 1.8
RNF4-207ENST00000506706 C4AP0C0L4 1744 aa26.27■■□□□ 1.8
RNF4-207ENST00000506706 CELF1Q92879 486 aaKnown RBP26.27■■□□□ 1.8
RNF4-207ENST00000506706 MINPP1Q9UNW1 487 aa26.27■■□□□ 1.8
RNF4-207ENST00000506706 VPS37CA5D8V6 355 aaPredicted RBP26.26■■□□□ 1.79
RNF4-207ENST00000506706 FAM196AQ6ZSG2 479 aa26.26■■□□□ 1.79
RNF4-207ENST00000506706 AIDAQ96BJ3 306 aa26.26■■□□□ 1.79
RNF4-207ENST00000506706 PFKFB2O60825 505 aa26.26■■□□□ 1.79
RNF4-207ENST00000506706 FBXL16Q8N461 479 aa26.26■■□□□ 1.79
RNF4-207ENST00000506706 MAGEB6Q8N7X4 407 aa26.26■■□□□ 1.79
RNF4-207ENST00000506706 PHF14O94880 888 aa26.25■■□□□ 1.79
RNF4-207ENST00000506706 MRE11P49959 708 aa26.25■■□□□ 1.79
RNF4-207ENST00000506706 GNL3LQ9NVN8 582 aaKnown RBP26.25■■□□□ 1.79
RNF4-207ENST00000506706 RPS8P62241 208 aaKnown RBP26.24■■□□□ 1.79
RNF4-207ENST00000506706 APOBRQ0VD83 1088 aa26.24■■□□□ 1.79
RNF4-207ENST00000506706 TMEM87AQ8NBN3 555 aa26.24■■□□□ 1.79
RNF4-207ENST00000506706 ZNF804BA4D1E1 1349 aa26.24■■□□□ 1.79
RNF4-207ENST00000506706 TCHHQ07283 1943 aa26.24■■□□□ 1.79
RNF4-207ENST00000506706 SCRN1Q12765 414 aa26.24■■□□□ 1.79
RNF4-207ENST00000506706 USP48Q86UV5 1035 aa26.24■■□□□ 1.79
RNF4-207ENST00000506706 NCOA7Q8NI08 942 aa26.24■■□□□ 1.79
RNF4-207ENST00000506706 STRBPQ96SI9 672 aaKnown RBP26.24■■□□□ 1.79
RNF4-207ENST00000506706 LLPHQ9BRT6 129 aaKnown RBP26.24■■□□□ 1.79
RNF4-207ENST00000506706 LRRC4BQ9NT99 713 aa26.24■■□□□ 1.79
RNF4-207ENST00000506706 APPP05067 770 aa26.23■■□□□ 1.79
RNF4-207ENST00000506706 GDPD2Q9HCC8 539 aa26.23■■□□□ 1.79
RNF4-207ENST00000506706 XRCC6P12956 609 aaKnown RBP eCLIP26.23■■□□□ 1.79
RNF4-207ENST00000506706 ADRA2BP18089 450 aa26.23■■□□□ 1.79
RNF4-207ENST00000506706 CHST3Q7LGC8 479 aa26.23■■□□□ 1.79
RNF4-207ENST00000506706 ZNF274Q96GC6 653 aaPredicted RBP26.23■■□□□ 1.79
RNF4-207ENST00000506706 CNPY2Q9Y2B0 182 aa26.23■■□□□ 1.79
RNF4-207ENST00000506706 MCM5P33992 734 aa26.22■■□□□ 1.79
RNF4-207ENST00000506706 CAVIN4Q5BKX8 364 aa26.22■■□□□ 1.79
RNF4-207ENST00000506706 RALYLQ86SE5 291 aaKnown RBP26.22■■□□□ 1.79
RNF4-207ENST00000506706 GRPEL1Q9HAV7 217 aa26.22■■□□□ 1.79
RNF4-207ENST00000506706 NPHP1O15259 732 aa26.21■■□□□ 1.79
RNF4-207ENST00000506706 GYG1P46976 350 aa26.21■■□□□ 1.79
RNF4-207ENST00000506706 ZSCAN23Q3MJ62 389 aa26.21■■□□□ 1.79
RNF4-207ENST00000506706 GAS2L3Q86XJ1 694 aa26.21■■□□□ 1.79
RNF4-207ENST00000506706 MB21D2Q8IYB1 491 aaPredicted RBP26.21■■□□□ 1.79
RNF4-207ENST00000506706 CHMP4CQ96CF2 233 aa26.21■■□□□ 1.79
RNF4-207ENST00000506706 JAK2O60674 1132 aa26.21■■□□□ 1.79
RNF4-207ENST00000506706 ZNF445P59923 1031 aa26.21■■□□□ 1.79
RNF4-207ENST00000506706 ALX1Q15699 326 aa26.21■■□□□ 1.79
RNF4-207ENST00000506706 LRP2BPQ9P2M1 347 aa26.21■■□□□ 1.79
RNF4-207ENST00000506706 NSFL1CQ9UNZ2 370 aaKnown RBP26.21■■□□□ 1.79
RNF4-207ENST00000506706 CARMIL3Q8ND23 1372 aa26.2■■□□□ 1.79
RNF4-207ENST00000506706 PATL2C9JE40 543 aaKnown RBP26.2■■□□□ 1.78
RNF4-207ENST00000506706 CCDC24Q8N4L8 307 aa26.2■■□□□ 1.78
RNF4-207ENST00000506706 ZMYM6O95789 1325 aa26.2■■□□□ 1.78
RNF4-207ENST00000506706 PRC1O43663 620 aa26.19■■□□□ 1.78
RNF4-207ENST00000506706 MBD4O95243 580 aa26.19■■□□□ 1.78
RNF4-207ENST00000506706 CDC37L1Q7L3B6 337 aa26.19■■□□□ 1.78
RNF4-207ENST00000506706 SMARCC2Q8TAQ2 1214 aa26.19■■□□□ 1.78
RNF4-207ENST00000506706 ANKRD2Q9GZV1 360 aa26.19■■□□□ 1.78
RNF4-207ENST00000506706 WDR19Q8NEZ3 1342 aa26.19■■□□□ 1.78
RNF4-207ENST00000506706 EVCP57679 992 aa26.19■■□□□ 1.78
RNF4-207ENST00000506706 TRDNQ13061 729 aa26.19■■□□□ 1.78
RNF4-207ENST00000506706 CSPP1Q1MSJ5 1256 aa26.19■■□□□ 1.78
RNF4-207ENST00000506706 VPS37DQ86XT2 251 aa26.19■■□□□ 1.78
RNF4-207ENST00000506706 RBM27Q9P2N5 1060 aaKnown RBP26.19■■□□□ 1.78
RNF4-207ENST00000506706 IQSEC3Q9UPP2 1182 aaPredicted RBP26.19■■□□□ 1.78
RNF4-207ENST00000506706 PDIA3P30101 505 aaKnown RBP26.18■■□□□ 1.78
RNF4-207ENST00000506706 NFIXQ14938 502 aa26.18■■□□□ 1.78
RNF4-207ENST00000506706 KRT27Q7Z3Y8 459 aa26.18■■□□□ 1.78
RNF4-207ENST00000506706 WTIPA6NIX2 430 aaPredicted RBP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms