RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 GRAPQ13588 217 aa11.38□□□□□ -0.59
TPM3-218ENST00000505010 CRY2Q49AN0 593 aa11.38□□□□□ -0.59
TPM3-218ENST00000505010 GRAPLQ8TC17 118 aaPredicted RBP11.38□□□□□ -0.59
TPM3-218ENST00000505010 XAGE2Q96GT9 111 aa11.38□□□□□ -0.59
TPM3-218ENST00000505010 RBM17Q96I25 401 aaKnown RBP11.38□□□□□ -0.59
TPM3-218ENST00000505010 BSDC1Q9NW68 430 aaPredicted RBP11.38□□□□□ -0.59
TPM3-218ENST00000505010 AKAP11Q9UKA4 1901 aa11.38□□□□□ -0.59
TPM3-218ENST00000505010 TNRC18O15417 2968 aaPredicted RBP11.37□□□□□ -0.59
TPM3-218ENST00000505010 NPR1P16066 1061 aa11.37□□□□□ -0.59
TPM3-218ENST00000505010 ATP5JP18859 108 aa11.37□□□□□ -0.59
TPM3-218ENST00000505010 LMOD1P29536 600 aaPredicted RBP11.37□□□□□ -0.59
TPM3-218ENST00000505010 IARSP41252 1262 aaKnown RBP11.37□□□□□ -0.59
TPM3-218ENST00000505010 TTC39AQ5SRH9 613 aa11.37□□□□□ -0.59
TPM3-218ENST00000505010 CASC1Q6TDU7 716 aa11.37□□□□□ -0.59
TPM3-218ENST00000505010 TBC1D9Q6ZT07 1266 aa11.37□□□□□ -0.59
TPM3-218ENST00000505010 JDP2Q8WYK2 163 aa11.37□□□□□ -0.59
TPM3-218ENST00000505010 BOLA2Q9H3K6 86 aa11.37□□□□□ -0.59
TPM3-218ENST00000505010 ADAMTSL1Q8N6G6 1762 aa11.36□□□□□ -0.59
TPM3-218ENST00000505010 MYO5AQ9Y4I1 1855 aaKnown RBP11.36□□□□□ -0.59
TPM3-218ENST00000505010 LTBP1Q14766 1721 aa11.36□□□□□ -0.59
TPM3-218ENST00000505010 AOC2O75106 756 aa11.36□□□□□ -0.59
TPM3-218ENST00000505010 KCNJ4P48050 445 aa11.36□□□□□ -0.59
TPM3-218ENST00000505010 FMR1Q06787 632 aaKnown RBP eCLIP11.36□□□□□ -0.59
TPM3-218ENST00000505010 DGKZQ13574 1117 aa11.36□□□□□ -0.59
TPM3-218ENST00000505010 CCDC158Q5M9N0 1113 aa11.36□□□□□ -0.59
TPM3-218ENST00000505010 CST9Q5W186 159 aa11.36□□□□□ -0.59
TPM3-218ENST00000505010 LPIN2Q92539 896 aa11.36□□□□□ -0.59
TPM3-218ENST00000505010 DNAJC2Q99543 621 aaKnown RBP11.36□□□□□ -0.59
TPM3-218ENST00000505010 ANKRD2Q9GZV1 360 aa11.36□□□□□ -0.59
TPM3-218ENST00000505010 MINPP1Q9UNW1 487 aa11.36□□□□□ -0.59
TPM3-218ENST00000505010 GJA3Q9Y6H8 435 aa11.36□□□□□ -0.59
TPM3-218ENST00000505010 TLL2Q9Y6L7 1015 aa11.36□□□□□ -0.59
TPM3-218ENST00000505010 PDE4DIPQ5VU43 2346 aa11.36□□□□□ -0.59
TPM3-218ENST00000505010 DOCK2Q92608 1830 aa11.35□□□□□ -0.59
TPM3-218ENST00000505010 KLRG2A4D1S0 409 aaPredicted RBP11.35□□□□□ -0.59
TPM3-218ENST00000505010 IFIT1P09914 478 aaKnown RBP11.35□□□□□ -0.59
TPM3-218ENST00000505010 FGFR2P21802 821 aa11.35□□□□□ -0.59
TPM3-218ENST00000505010 ALDH1B1P30837 517 aa11.35□□□□□ -0.59
TPM3-218ENST00000505010 HOXA10P31260 410 aaPredicted RBP11.35□□□□□ -0.59
TPM3-218ENST00000505010 MFAP1P55081 439 aaKnown RBP11.35□□□□□ -0.59
TPM3-218ENST00000505010 EIF6P56537 245 aaKnown RBP11.35□□□□□ -0.59
TPM3-218ENST00000505010 OLFM4Q6UX06 510 aa11.35□□□□□ -0.59
TPM3-218ENST00000505010 EVI5LQ96CN4 794 aa11.35□□□□□ -0.59
TPM3-218ENST00000505010 CRAMP1Q96RY5 1269 aa11.35□□□□□ -0.59
TPM3-218ENST00000505010 SNAP23O00161 211 aa11.34□□□□□ -0.59
TPM3-218ENST00000505010 TRAF5O00463 557 aa11.34□□□□□ -0.59
TPM3-218ENST00000505010 PPEF1O14829 653 aaPredicted RBP11.34□□□□□ -0.59
TPM3-218ENST00000505010 SEC24BO95487 1268 aa11.34□□□□□ -0.59
TPM3-218ENST00000505010 USP50Q70EL3 339 aaPredicted RBP11.34□□□□□ -0.59
TPM3-218ENST00000505010 HAUS7Q99871 368 aa11.34□□□□□ -0.59
TPM3-218ENST00000505010 FSD1Q9BTV5 496 aa11.34□□□□□ -0.59
TPM3-218ENST00000505010 UPF2Q9HAU5 1272 aaKnown RBP11.34□□□□□ -0.59
TPM3-218ENST00000505010 NDUFB9Q9Y6M9 179 aa11.34□□□□□ -0.59
TPM3-218ENST00000505010 EPS15P42566 896 aa11.33□□□□□ -0.6
TPM3-218ENST00000505010 PHKA1P46020 1223 aa11.33□□□□□ -0.6
TPM3-218ENST00000505010 UBE4AQ14139 1066 aa11.33□□□□□ -0.6
TPM3-218ENST00000505010 SLC51AQ86UW1 340 aa11.33□□□□□ -0.6
TPM3-218ENST00000505010 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.33□□□□□ -0.6
TPM3-218ENST00000505010 DIAPH3Q9NSV4 1193 aa11.33□□□□□ -0.6
TPM3-218ENST00000505010 ANKIB1Q9P2G1 1089 aa11.33□□□□□ -0.6
TPM3-218ENST00000505010 RBM19Q9Y4C8 960 aaKnown RBP11.33□□□□□ -0.6
TPM3-218ENST00000505010 XDHP47989 1333 aa11.33□□□□□ -0.6
TPM3-218ENST00000505010 CASP8AP2Q9UKL3 1982 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 RFX7Q2KHR2 1363 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 THSD7BQ9C0I4 1608 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 MAST2Q6P0Q8 1798 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 GOLIM4O00461 696 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 EIF5BO60841 1220 aaKnown RBP11.32□□□□□ -0.6
TPM3-218ENST00000505010 BBOX1O75936 387 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 UQCRFS1P1P0C7P4 283 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 CHMLP26374 656 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 SCNN1DP51172 638 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 CCDC102BQ68D86 513 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 TMC4Q7Z404 712 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 SAPCD2Q86UD0 394 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 EDC3Q96F86 508 aaKnown RBP11.32□□□□□ -0.6
TPM3-218ENST00000505010 PSMD1Q99460 953 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 SNRKQ9NRH2 765 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 PAG1Q9NWQ8 432 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 ZNF804BA4D1E1 1349 aa11.32□□□□□ -0.6
TPM3-218ENST00000505010 CELF2O95319 508 aaKnown RBP11.31□□□□□ -0.6
TPM3-218ENST00000505010 ARID4AP29374 1257 aaPredicted RBP11.31□□□□□ -0.6
TPM3-218ENST00000505010 GPSM2P81274 684 aa11.31□□□□□ -0.6
TPM3-218ENST00000505010 SCARF1Q14162 830 aa11.31□□□□□ -0.6
TPM3-218ENST00000505010 HHIPL1Q96JK4 782 aa11.31□□□□□ -0.6
TPM3-218ENST00000505010 ZNF512BQ96KM6 892 aaPredicted RBP11.31□□□□□ -0.6
TPM3-218ENST00000505010 ESYT1Q9BSJ8 1104 aa11.31□□□□□ -0.6
TPM3-218ENST00000505010 DUOX1Q9NRD9 1551 aa11.31□□□□□ -0.6
TPM3-218ENST00000505010 WTIPA6NIX2 430 aaPredicted RBP11.3□□□□□ -0.6
TPM3-218ENST00000505010 HIP1O00291 1037 aa11.3□□□□□ -0.6
TPM3-218ENST00000505010 UFL1O94874 794 aa11.3□□□□□ -0.6
TPM3-218ENST00000505010 KLRK1P26718 216 aa11.3□□□□□ -0.6
TPM3-218ENST00000505010 MCAMP43121 646 aa11.3□□□□□ -0.6
TPM3-218ENST00000505010 GYG1P46976 350 aa11.3□□□□□ -0.6
TPM3-218ENST00000505010 BCAMP50895 628 aa11.3□□□□□ -0.6
TPM3-218ENST00000505010 CAVIN4Q5BKX8 364 aa11.3□□□□□ -0.6
TPM3-218ENST00000505010 CC2D2BQ6DHV5 1058 aa11.3□□□□□ -0.6
TPM3-218ENST00000505010 CIAPIN1Q6FI81 312 aa11.3□□□□□ -0.6
TPM3-218ENST00000505010 PI16Q6UXB8 463 aa11.3□□□□□ -0.6
TPM3-218ENST00000505010 VPS37DQ86XT2 251 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms