RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 RASGRF1Q13972 1273 aa16.57■□□□□ 0.24
CPNE1-227ENST00000498056 SCARF1Q14162 830 aa16.57■□□□□ 0.24
CPNE1-227ENST00000498056 PI16Q6UXB8 463 aa16.57■□□□□ 0.24
CPNE1-227ENST00000498056 FBXO33Q7Z6M2 555 aa16.57■□□□□ 0.24
CPNE1-227ENST00000498056 DNAJC2Q99543 621 aaKnown RBP16.57■□□□□ 0.24
CPNE1-227ENST00000498056 AOX1Q06278 1338 aa16.56■□□□□ 0.24
CPNE1-227ENST00000498056 ERC2O15083 957 aa16.56■□□□□ 0.24
CPNE1-227ENST00000498056 MCAMP43121 646 aa16.56■□□□□ 0.24
CPNE1-227ENST00000498056 PDE1AP54750 535 aa16.56■□□□□ 0.24
CPNE1-227ENST00000498056 C9orf131Q5VYM1 1079 aa16.56■□□□□ 0.24
CPNE1-227ENST00000498056 PLEKHM2Q8IWE5 1019 aa16.56■□□□□ 0.24
CPNE1-227ENST00000498056 NDUFB9Q9Y6M9 179 aa16.56■□□□□ 0.24
CPNE1-227ENST00000498056 YDJCA8MPS7 323 aa16.55■□□□□ 0.24
CPNE1-227ENST00000498056 SEMA3EO15041 775 aa16.55■□□□□ 0.24
CPNE1-227ENST00000498056 IL1R1P14778 569 aa16.55■□□□□ 0.24
CPNE1-227ENST00000498056 TDRD7Q8NHU6 1098 aaKnown RBP16.55■□□□□ 0.24
CPNE1-227ENST00000498056 BOLA2Q9H3K6 86 aa16.55■□□□□ 0.24
CPNE1-227ENST00000498056 SNRKQ9NRH2 765 aa16.55■□□□□ 0.24
CPNE1-227ENST00000498056 CDK5RAP2Q96SN8 1893 aa16.54■□□□□ 0.24
CPNE1-227ENST00000498056 ZNF541Q9H0D2 1346 aa16.54■□□□□ 0.24
CPNE1-227ENST00000498056 GLRX3O76003 335 aaKnown RBP16.54■□□□□ 0.24
CPNE1-227ENST00000498056 GTF2IP78347 998 aa16.54■□□□□ 0.24
CPNE1-227ENST00000498056 PODNQ7Z5L7 613 aa16.54■□□□□ 0.24
CPNE1-227ENST00000498056 SPATA5Q8NB90 893 aa16.54■□□□□ 0.24
CPNE1-227ENST00000498056 PI4K2BQ8TCG2 481 aa16.54■□□□□ 0.24
CPNE1-227ENST00000498056 HMG20BQ9P0W2 317 aa16.54■□□□□ 0.24
CPNE1-227ENST00000498056 DENND2AQ9ULE3 1009 aa16.54■□□□□ 0.24
CPNE1-227ENST00000498056 ZNRF3Q9ULT6 936 aa16.54■□□□□ 0.24
CPNE1-227ENST00000498056 RAD17O75943 681 aa16.53■□□□□ 0.24
CPNE1-227ENST00000498056 ATP5JP18859 108 aa16.53■□□□□ 0.24
CPNE1-227ENST00000498056 ZNF512BQ96KM6 892 aaPredicted RBP16.53■□□□□ 0.24
CPNE1-227ENST00000498056 STAP2Q9UGK3 403 aa16.53■□□□□ 0.24
CPNE1-227ENST00000498056 PDS5AQ29RF7 1337 aaKnown RBP16.52■□□□□ 0.24
CPNE1-227ENST00000498056 MAP4K4O95819 1239 aaPredicted RBP16.52■□□□□ 0.24
CPNE1-227ENST00000498056 ZAP70P43403 619 aa16.52■□□□□ 0.24
CPNE1-227ENST00000498056 EIF6P56537 245 aaKnown RBP16.52■□□□□ 0.24
CPNE1-227ENST00000498056 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.52■□□□□ 0.24
CPNE1-227ENST00000498056 SCN4AP35499 1836 aa16.52■□□□□ 0.23
CPNE1-227ENST00000498056 FOCADQ5VW36 1801 aa16.52■□□□□ 0.23
CPNE1-227ENST00000498056 USP17L3A6NCW0 530 aa16.51■□□□□ 0.23
CPNE1-227ENST00000498056 USP17L4A6NCW7 530 aa16.51■□□□□ 0.23
CPNE1-227ENST00000498056 GOLIM4O00461 696 aa16.51■□□□□ 0.23
CPNE1-227ENST00000498056 TTC22Q5TAA0 569 aa16.51■□□□□ 0.23
CPNE1-227ENST00000498056 CIAPIN1Q6FI81 312 aa16.51■□□□□ 0.23
CPNE1-227ENST00000498056 USP17L1Q7RTZ2 530 aa16.51■□□□□ 0.23
CPNE1-227ENST00000498056 EDC3Q96F86 508 aaKnown RBP16.51■□□□□ 0.23
CPNE1-227ENST00000498056 HAUS7Q99871 368 aa16.51■□□□□ 0.23
CPNE1-227ENST00000498056 OSBPL3Q9H4L5 887 aa16.51■□□□□ 0.23
CPNE1-227ENST00000498056 KCNQ5Q9NR82 932 aa16.51■□□□□ 0.23
CPNE1-227ENST00000498056 PAG1Q9NWQ8 432 aa16.51■□□□□ 0.23
CPNE1-227ENST00000498056 ABCF2Q9UG63 623 aa16.51■□□□□ 0.23
CPNE1-227ENST00000498056 NAV1Q8NEY1 1877 aa16.5■□□□□ 0.23
CPNE1-227ENST00000498056 FAM205AQ6ZU69 1335 aa16.5■□□□□ 0.23
CPNE1-227ENST00000498056 TRIM6-TRIM34B2RNG4 842 aa16.5■□□□□ 0.23
CPNE1-227ENST00000498056 FZD9O00144 591 aa16.5■□□□□ 0.23
CPNE1-227ENST00000498056 PSMD14O00487 310 aa16.5■□□□□ 0.23
CPNE1-227ENST00000498056 MFSD14BQ5SR56 506 aa16.5■□□□□ 0.23
CPNE1-227ENST00000498056 TTLL5Q6EMB2 1281 aa16.5■□□□□ 0.23
CPNE1-227ENST00000498056 WDR66Q8TBY9 1149 aa16.5■□□□□ 0.23
CPNE1-227ENST00000498056 MXD3Q9BW11 206 aa16.5■□□□□ 0.23
CPNE1-227ENST00000498056 GJA3Q9Y6H8 435 aa16.5■□□□□ 0.23
CPNE1-227ENST00000498056 WDR90Q96KV7 1748 aa16.5■□□□□ 0.23
CPNE1-227ENST00000498056 ZC3H4Q9UPT8 1303 aaKnown RBP16.49■□□□□ 0.23
CPNE1-227ENST00000498056 CYP2E1P05181 493 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-227ENST00000498056 GSPT1P15170 499 aaKnown RBP16.49■□□□□ 0.23
CPNE1-227ENST00000498056 CXCL9Q07325 125 aa16.49■□□□□ 0.23
CPNE1-227ENST00000498056 DACT2Q5SW24 774 aa16.49■□□□□ 0.23
CPNE1-227ENST00000498056 STRIP1Q5VSL9 837 aa16.49■□□□□ 0.23
CPNE1-227ENST00000498056 TBC1D22AQ8WUA7 517 aa16.49■□□□□ 0.23
CPNE1-227ENST00000498056 ANTXR1Q9H6X2 564 aa16.49■□□□□ 0.23
CPNE1-227ENST00000498056 F8W031 263 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-227ENST00000498056 TBC1D9Q6ZT07 1266 aa16.48■□□□□ 0.23
CPNE1-227ENST00000498056 ZGPATQ8N5A5 531 aaKnown RBP16.48■□□□□ 0.23
CPNE1-227ENST00000498056 RILPL2Q969X0 211 aa16.48■□□□□ 0.23
CPNE1-227ENST00000498056 FSD1Q9BTV5 496 aa16.48■□□□□ 0.23
CPNE1-227ENST00000498056 PIH1D3Q9NQM4 214 aaKnown RBP16.48■□□□□ 0.23
CPNE1-227ENST00000498056 MYO3BQ8WXR4 1341 aa16.47■□□□□ 0.23
CPNE1-227ENST00000498056 SALL1Q9NSC2 1324 aa16.47■□□□□ 0.23
CPNE1-227ENST00000498056 IDH1O75874 414 aaKnown RBP16.47■□□□□ 0.23
CPNE1-227ENST00000498056 PRDX5P30044 214 aa16.47■□□□□ 0.23
CPNE1-227ENST00000498056 TNIP1Q15025 636 aa16.47■□□□□ 0.23
CPNE1-227ENST00000498056 TTF1Q15361 905 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-227ENST00000498056 RSBN1LQ6PCB5 846 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-227ENST00000498056 DZIP1Q86YF9 867 aaKnown RBP16.47■□□□□ 0.23
CPNE1-227ENST00000498056 CNTROBQ8N137 903 aa16.47■□□□□ 0.23
CPNE1-227ENST00000498056 CERS5Q8N5B7 392 aa16.47■□□□□ 0.23
CPNE1-227ENST00000498056 RAI14Q9P0K7 980 aa16.47■□□□□ 0.23
CPNE1-227ENST00000498056 LRP2BPQ9P2M1 347 aa16.47■□□□□ 0.23
CPNE1-227ENST00000498056 ZBTB22O15209 634 aa16.46■□□□□ 0.23
CPNE1-227ENST00000498056 LDHBP07195 334 aaKnown RBP16.46■□□□□ 0.23
CPNE1-227ENST00000498056 ERICH6Q7L0X2 663 aa16.46■□□□□ 0.23
CPNE1-227ENST00000498056 KIAA0825Q8IV33 1275 aa16.46■□□□□ 0.23
CPNE1-227ENST00000498056 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.23
CPNE1-227ENST00000498056 LAMB1P07942 1786 aa16.46■□□□□ 0.22
CPNE1-227ENST00000498056 MAST3O60307 1309 aa16.45■□□□□ 0.22
CPNE1-227ENST00000498056 GRIK5Q16478 980 aa16.45■□□□□ 0.22
CPNE1-227ENST00000498056 SPTY2D1Q68D10 685 aaPredicted RBP16.45■□□□□ 0.22
CPNE1-227ENST00000498056 GPC2Q8N158 579 aa16.45■□□□□ 0.22
CPNE1-227ENST00000498056 EVI5LQ96CN4 794 aa16.45■□□□□ 0.22
CPNE1-227ENST00000498056 RFX7Q2KHR2 1363 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms