RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 USP2O75604 605 aaPredicted RBP12.68□□□□□ -0.38
SRSF4-205ENST00000497015 ZBTB48P10074 688 aaPredicted RBP12.68□□□□□ -0.38
SRSF4-205ENST00000497015 ATP2B4P23634 1241 aa12.68□□□□□ -0.38
SRSF4-205ENST00000497015 ZBTB38Q8NAP3 1195 aaPredicted RBP12.68□□□□□ -0.38
SRSF4-205ENST00000497015 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
SRSF4-205ENST00000497015 DEFB129Q9H1M3 183 aa12.68□□□□□ -0.38
SRSF4-205ENST00000497015 XDHP47989 1333 aa12.67□□□□□ -0.38
SRSF4-205ENST00000497015 CHL1O00533 1208 aa12.67□□□□□ -0.38
SRSF4-205ENST00000497015 RIPK4P57078 832 aa12.67□□□□□ -0.38
SRSF4-205ENST00000497015 STRIP1Q5VSL9 837 aa12.67□□□□□ -0.38
SRSF4-205ENST00000497015 OGFOD1Q8N543 542 aa12.67□□□□□ -0.38
SRSF4-205ENST00000497015 RNF25Q96BH1 459 aaPredicted RBP12.67□□□□□ -0.38
SRSF4-205ENST00000497015 MRS2Q9HD23 443 aa12.67□□□□□ -0.38
SRSF4-205ENST00000497015 MINPP1Q9UNW1 487 aa12.67□□□□□ -0.38
SRSF4-205ENST00000497015 SOX1O00570 391 aaPredicted RBP12.66□□□□□ -0.38
SRSF4-205ENST00000497015 KLRK1P26718 216 aa12.66□□□□□ -0.38
SRSF4-205ENST00000497015 SLC4A8Q2Y0W8 1093 aa12.66□□□□□ -0.38
SRSF4-205ENST00000497015 NBPF12Q5TAG4 269 aaPredicted RBP12.66□□□□□ -0.38
SRSF4-205ENST00000497015 KIAA0825Q8IV33 1275 aa12.66□□□□□ -0.38
SRSF4-205ENST00000497015 SH3TC2Q8TF17 1288 aa12.66□□□□□ -0.38
SRSF4-205ENST00000497015 SHISA4Q96DD7 197 aa12.66□□□□□ -0.38
SRSF4-205ENST00000497015 ARHGAP39Q9C0H5 1083 aa12.66□□□□□ -0.38
SRSF4-205ENST00000497015 RYDENQ9NUL5 291 aaKnown RBP12.66□□□□□ -0.38
SRSF4-205ENST00000497015 SLC9C1Q4G0N8 1177 aa12.65□□□□□ -0.38
SRSF4-205ENST00000497015 TTLL5Q6EMB2 1281 aa12.65□□□□□ -0.38
SRSF4-205ENST00000497015 UBE2Q1Q7Z7E8 422 aa12.65□□□□□ -0.38
SRSF4-205ENST00000497015 APOBEC3FQ8IUX4 373 aaKnown RBP12.65□□□□□ -0.38
SRSF4-205ENST00000497015 PDE8AO60658 829 aa12.64□□□□□ -0.39
SRSF4-205ENST00000497015 CALD1Q05682 793 aaKnown RBP12.64□□□□□ -0.39
SRSF4-205ENST00000497015 MTFR1Q15390 333 aa12.64□□□□□ -0.39
SRSF4-205ENST00000497015 CCDC184Q52MB2 194 aa12.64□□□□□ -0.39
SRSF4-205ENST00000497015 ANKRD18AQ8IVF6 992 aa12.64□□□□□ -0.39
SRSF4-205ENST00000497015 CCDC146Q8IYE0 955 aa12.64□□□□□ -0.39
SRSF4-205ENST00000497015 CERS5Q8N5B7 392 aa12.64□□□□□ -0.39
SRSF4-205ENST00000497015 FBXW7Q969H0 707 aa12.64□□□□□ -0.39
SRSF4-205ENST00000497015 PHAXQ9H814 394 aaKnown RBP12.64□□□□□ -0.39
SRSF4-205ENST00000497015 MED23Q9ULK4 1368 aa12.64□□□□□ -0.39
SRSF4-205ENST00000497015 CCER2I3L3R5 266 aa12.63□□□□□ -0.39
SRSF4-205ENST00000497015 RIOK3O14730 519 aaKnown RBP12.63□□□□□ -0.39
SRSF4-205ENST00000497015 PCCAP05165 728 aaPredicted RBP12.63□□□□□ -0.39
SRSF4-205ENST00000497015 CCT4P50991 539 aaKnown RBP12.63□□□□□ -0.39
SRSF4-205ENST00000497015 CCDC27Q2M243 656 aa12.63□□□□□ -0.39
SRSF4-205ENST00000497015 CCDC152Q4G0S7 254 aa12.63□□□□□ -0.39
SRSF4-205ENST00000497015 NBPF11Q86T75 865 aa12.63□□□□□ -0.39
SRSF4-205ENST00000497015 BRI3BPQ8WY22 251 aa12.63□□□□□ -0.39
SRSF4-205ENST00000497015 DPF3Q92784 378 aa12.63□□□□□ -0.39
SRSF4-205ENST00000497015 LRCH3Q96II8 777 aa12.63□□□□□ -0.39
SRSF4-205ENST00000497015 PRMT6Q96LA8 375 aaPredicted RBP12.63□□□□□ -0.39
SRSF4-205ENST00000497015 COA1Q9GZY4 146 aa12.63□□□□□ -0.39
SRSF4-205ENST00000497015 DBF4Q9UBU7 674 aaPredicted RBP12.63□□□□□ -0.39
SRSF4-205ENST00000497015 LAMB1P07942 1786 aa12.63□□□□□ -0.39
SRSF4-205ENST00000497015 MYO3BQ8WXR4 1341 aa12.62□□□□□ -0.39
SRSF4-205ENST00000497015 UNCXA6NJT0 531 aa12.62□□□□□ -0.39
SRSF4-205ENST00000497015 PPP1R12BO60237 982 aaPredicted RBP12.62□□□□□ -0.39
SRSF4-205ENST00000497015 CTGFP29279 349 aa12.62□□□□□ -0.39
SRSF4-205ENST00000497015 GTF2IP78347 998 aa12.62□□□□□ -0.39
SRSF4-205ENST00000497015 HDGFL1Q5TGJ6 251 aa12.62□□□□□ -0.39
SRSF4-205ENST00000497015 FAM43AQ8N2R8 423 aa12.62□□□□□ -0.39
SRSF4-205ENST00000497015 TTLL11Q8NHH1 800 aa12.62□□□□□ -0.39
SRSF4-205ENST00000497015 MYD88Q99836 296 aa12.62□□□□□ -0.39
SRSF4-205ENST00000497015 BSDC1Q9NW68 430 aaPredicted RBP12.62□□□□□ -0.39
SRSF4-205ENST00000497015 TRIM35Q9UPQ4 493 aa12.62□□□□□ -0.39
SRSF4-205ENST00000497015 CEP290O15078 2479 aa12.62□□□□□ -0.39
SRSF4-205ENST00000497015 CLRN2A0PK11 232 aa12.61□□□□□ -0.39
SRSF4-205ENST00000497015 APAF1O14727 1248 aa12.61□□□□□ -0.39
SRSF4-205ENST00000497015 MMP14P50281 582 aa12.61□□□□□ -0.39
SRSF4-205ENST00000497015 OTUD7BQ6GQQ9 843 aa12.61□□□□□ -0.39
SRSF4-205ENST00000497015 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.61□□□□□ -0.39
SRSF4-205ENST00000497015 CDAN1Q8IWY9 1227 aa12.61□□□□□ -0.39
SRSF4-205ENST00000497015 MTMR14Q8NCE2 650 aa12.61□□□□□ -0.39
SRSF4-205ENST00000497015 OPTNQ96CV9 577 aa12.61□□□□□ -0.39
SRSF4-205ENST00000497015 GREM2Q9H772 168 aa12.61□□□□□ -0.39
SRSF4-205ENST00000497015 ELP3Q9H9T3 547 aa12.61□□□□□ -0.39
SRSF4-205ENST00000497015 CACNA1FO60840 1977 aa12.61□□□□□ -0.39
SRSF4-205ENST00000497015 LAMA3Q16787 3333 aa12.6□□□□□ -0.39
SRSF4-205ENST00000497015 SNAP23O00161 211 aa12.6□□□□□ -0.39
SRSF4-205ENST00000497015 DLGAP5Q15398 846 aa12.6□□□□□ -0.39
SRSF4-205ENST00000497015 RIC3Q7Z5B4 369 aa12.6□□□□□ -0.39
SRSF4-205ENST00000497015 ANKRD13AQ8IZ07 590 aa12.6□□□□□ -0.39
SRSF4-205ENST00000497015 CCDC191Q8NCU4 936 aa12.6□□□□□ -0.39
SRSF4-205ENST00000497015 HYPKQ9NX55 129 aa12.6□□□□□ -0.39
SRSF4-205ENST00000497015 ZSWIM8A7E2V4 1837 aa12.6□□□□□ -0.39
SRSF4-205ENST00000497015 ZNF804BA4D1E1 1349 aa12.6□□□□□ -0.39
SRSF4-205ENST00000497015 IRS2Q9Y4H2 1338 aa12.6□□□□□ -0.39
SRSF4-205ENST00000497015 ABCB7O75027 752 aa12.59□□□□□ -0.39
SRSF4-205ENST00000497015 MNX1P50219 401 aaPredicted RBP12.59□□□□□ -0.39
SRSF4-205ENST00000497015 RASA3Q14644 834 aa12.59□□□□□ -0.39
SRSF4-205ENST00000497015 NEUROD2Q15784 382 aa12.59□□□□□ -0.39
SRSF4-205ENST00000497015 SUPT20HL1Q3ZLR7 823 aa12.59□□□□□ -0.39
SRSF4-205ENST00000497015 DUSP27Q5VZP5 1158 aa12.59□□□□□ -0.39
SRSF4-205ENST00000497015 CD209Q9NNX6 404 aa12.59□□□□□ -0.39
SRSF4-205ENST00000497015 LAS1LQ9Y4W2 734 aaKnown RBP12.59□□□□□ -0.39
SRSF4-205ENST00000497015 ZBTB7BO15156 539 aaPredicted RBP12.58□□□□□ -0.4
SRSF4-205ENST00000497015 HOXB7P09629 217 aa12.58□□□□□ -0.4
SRSF4-205ENST00000497015 IREB2P48200 963 aaKnown RBP12.58□□□□□ -0.4
SRSF4-205ENST00000497015 CTSWP56202 376 aa12.58□□□□□ -0.4
SRSF4-205ENST00000497015 LACTBP83111 547 aaPredicted RBP12.58□□□□□ -0.4
SRSF4-205ENST00000497015 TAF1CQ15572 869 aaPredicted RBP12.58□□□□□ -0.4
SRSF4-205ENST00000497015 CFAP100Q494V2 611 aa12.58□□□□□ -0.4
SRSF4-205ENST00000497015 TEPSINQ96N21 525 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 462.5 ms