RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 IARSP41252 1262 aaKnown RBP15.17■□□□□ 0.02
SNX17-208ENST00000493711 PDE1AP54750 535 aa15.17■□□□□ 0.02
SNX17-208ENST00000493711 C16orf71Q8IYS4 520 aaPredicted RBP15.17■□□□□ 0.02
SNX17-208ENST00000493711 BCL11AQ9H165 835 aa15.17■□□□□ 0.02
SNX17-208ENST00000493711 SLX4Q8IY92 1834 aa15.17■□□□□ 0.02
SNX17-208ENST00000493711 PDS5AQ29RF7 1337 aaKnown RBP15.17■□□□□ 0.02
SNX17-208ENST00000493711 SALL3Q9BXA9 1300 aa15.17■□□□□ 0.02
SNX17-208ENST00000493711 NFKBIEO00221 500 aa15.16■□□□□ 0.02
SNX17-208ENST00000493711 IGSF3O75054 1194 aa15.16■□□□□ 0.02
SNX17-208ENST00000493711 FRAT2O75474 233 aaPredicted RBP15.16■□□□□ 0.02
SNX17-208ENST00000493711 IL1R1P14778 569 aa15.16■□□□□ 0.02
SNX17-208ENST00000493711 ADORA1P30542 326 aa15.16■□□□□ 0.02
SNX17-208ENST00000493711 GYG1P46976 350 aa15.16■□□□□ 0.02
SNX17-208ENST00000493711 BCAMP50895 628 aa15.16■□□□□ 0.02
SNX17-208ENST00000493711 PLEKHM2Q8IWE5 1019 aa15.16■□□□□ 0.02
SNX17-208ENST00000493711 RASEFQ8IZ41 740 aa15.16■□□□□ 0.02
SNX17-208ENST00000493711 LARGE2Q8N3Y3 721 aa15.16■□□□□ 0.02
SNX17-208ENST00000493711 JDP2Q8WYK2 163 aa15.16■□□□□ 0.02
SNX17-208ENST00000493711 GPBP1L1Q9HC44 474 aaPredicted RBP15.16■□□□□ 0.02
SNX17-208ENST00000493711 TLR7Q9NYK1 1049 aaKnown RBP15.16■□□□□ 0.02
SNX17-208ENST00000493711 DENND2AQ9ULE3 1009 aa15.16■□□□□ 0.02
SNX17-208ENST00000493711 RIMBP2O15034 1052 aa15.15■□□□□ 0.02
SNX17-208ENST00000493711 LMNB1P20700 586 aa15.15■□□□□ 0.02
SNX17-208ENST00000493711 AOC3Q16853 763 aa15.15■□□□□ 0.02
SNX17-208ENST00000493711 SLC51AQ86UW1 340 aa15.15■□□□□ 0.02
SNX17-208ENST00000493711 NIM1KQ8IY84 436 aa15.15■□□□□ 0.02
SNX17-208ENST00000493711 TDRD7Q8NHU6 1098 aaKnown RBP15.15■□□□□ 0.02
SNX17-208ENST00000493711 CD209Q9NNX6 404 aa15.15■□□□□ 0.02
SNX17-208ENST00000493711 ZNF277Q9NRM2 450 aaPredicted RBP15.15■□□□□ 0.02
SNX17-208ENST00000493711 WTIPA6NIX2 430 aaPredicted RBP15.14■□□□□ 0.01
SNX17-208ENST00000493711 PDE4AP27815 886 aa15.14■□□□□ 0.01
SNX17-208ENST00000493711 PHKA1P46020 1223 aa15.14■□□□□ 0.01
SNX17-208ENST00000493711 TXNRD3Q86VQ6 643 aa15.14■□□□□ 0.01
SNX17-208ENST00000493711 TICAM2Q86XR7 235 aa15.14■□□□□ 0.01
SNX17-208ENST00000493711 KLRK1P26718 216 aa15.13■□□□□ 0.01
SNX17-208ENST00000493711 TTF1Q15361 905 aaPredicted RBP15.13■□□□□ 0.01
SNX17-208ENST00000493711 SPATA5Q8NB90 893 aa15.13■□□□□ 0.01
SNX17-208ENST00000493711 WDR66Q8TBY9 1149 aa15.13■□□□□ 0.01
SNX17-208ENST00000493711 OTUD7AQ8TE49 926 aaPredicted RBP15.13■□□□□ 0.01
SNX17-208ENST00000493711 TBC1D22AQ8WUA7 517 aa15.13■□□□□ 0.01
SNX17-208ENST00000493711 GPR101Q96P66 508 aaPredicted RBP15.13■□□□□ 0.01
SNX17-208ENST00000493711 DUOX1Q9NRD9 1551 aa15.13■□□□□ 0.01
SNX17-208ENST00000493711 ZNRF3Q9ULT6 936 aa15.13■□□□□ 0.01
SNX17-208ENST00000493711 GALR2O43603 387 aaPredicted RBP15.12■□□□□ 0.01
SNX17-208ENST00000493711 ECE2O60344 883 aa15.12■□□□□ 0.01
SNX17-208ENST00000493711 LRRFIP1Q32MZ4 808 aaKnown RBP15.12■□□□□ 0.01
SNX17-208ENST00000493711 TMED8Q6PL24 325 aaPredicted RBP15.12■□□□□ 0.01
SNX17-208ENST00000493711 ZGPATQ8N5A5 531 aaKnown RBP15.12■□□□□ 0.01
SNX17-208ENST00000493711 PI4K2BQ8TCG2 481 aa15.12■□□□□ 0.01
SNX17-208ENST00000493711 HAUS7Q99871 368 aa15.12■□□□□ 0.01
SNX17-208ENST00000493711 BRCA1P38398 1863 aaKnown RBP15.12■□□□□ 0.01
SNX17-208ENST00000493711 LTBP1Q14766 1721 aa15.12■□□□□ 0.01
SNX17-208ENST00000493711 RGS3P49796 1198 aa15.11■□□□□ 0.01
SNX17-208ENST00000493711 RASSF7Q02833 373 aa15.11■□□□□ 0.01
SNX17-208ENST00000493711 RASGRF1Q13972 1273 aa15.11■□□□□ 0.01
SNX17-208ENST00000493711 DOK7Q18PE1 504 aa15.11■□□□□ 0.01
SNX17-208ENST00000493711 STRIP1Q5VSL9 837 aa15.11■□□□□ 0.01
SNX17-208ENST00000493711 SPTY2D1Q68D10 685 aaPredicted RBP15.11■□□□□ 0.01
SNX17-208ENST00000493711 HMG20BQ9P0W2 317 aa15.11■□□□□ 0.01
SNX17-208ENST00000493711 FAM205AQ6ZU69 1335 aa15.11■□□□□ 0.01
SNX17-208ENST00000493711 TAF1P21675 1872 aa15.1■□□□□ 0.01
SNX17-208ENST00000493711 USP17L3A6NCW0 530 aa15.1■□□□□ 0.01
SNX17-208ENST00000493711 USP17L4A6NCW7 530 aa15.1■□□□□ 0.01
SNX17-208ENST00000493711 MCAMP43121 646 aa15.1■□□□□ 0.01
SNX17-208ENST00000493711 VASPP50552 380 aaPredicted RBP15.1■□□□□ 0.01
SNX17-208ENST00000493711 FKBP1AP62942 108 aaKnown RBP15.1■□□□□ 0.01
SNX17-208ENST00000493711 TNIP1Q15025 636 aa15.1■□□□□ 0.01
SNX17-208ENST00000493711 TTC22Q5TAA0 569 aa15.1■□□□□ 0.01
SNX17-208ENST00000493711 USP17L1Q7RTZ2 530 aa15.1■□□□□ 0.01
SNX17-208ENST00000493711 BOLA2Q9H3K6 86 aa15.1■□□□□ 0.01
SNX17-208ENST00000493711 DBNDD1Q9H9R9 158 aa15.1■□□□□ 0.01
SNX17-208ENST00000493711 SUGT1Q9Y2Z0 365 aa15.1■□□□□ 0.01
SNX17-208ENST00000493711 SALL1Q9NSC2 1324 aa15.1■□□□□ 0.01
SNX17-208ENST00000493711 ZC3H4Q9UPT8 1303 aaKnown RBP15.1■□□□□ 0.01
SNX17-208ENST00000493711 SPEF2Q9C093 1822 aa15.09■□□□□ 0.01
SNX17-208ENST00000493711 ARFGEF1Q9Y6D6 1849 aa15.09■□□□□ 0.01
SNX17-208ENST00000493711 POTEIP0CG38 1075 aa15.09■□□□□ 0.01
SNX17-208ENST00000493711 MMP14P50281 582 aa15.09■□□□□ 0.01
SNX17-208ENST00000493711 EIF6P56537 245 aaKnown RBP15.09■□□□□ 0.01
SNX17-208ENST00000493711 BMP2KLQ5H9B9 411 aa15.09■□□□□ 0.01
SNX17-208ENST00000493711 TTLL5Q6EMB2 1281 aa15.09■□□□□ 0.01
SNX17-208ENST00000493711 CNTROBQ8N137 903 aa15.09■□□□□ 0.01
SNX17-208ENST00000493711 ZNF526Q8TF50 670 aaPredicted RBP15.09■□□□□ 0.01
SNX17-208ENST00000493711 EVI5LQ96CN4 794 aa15.09■□□□□ 0.01
SNX17-208ENST00000493711 PAG1Q9NWQ8 432 aa15.09■□□□□ 0.01
SNX17-208ENST00000493711 MYO3BQ8WXR4 1341 aa15.09■□□□□ 0.01
SNX17-208ENST00000493711 FZD9O00144 591 aa15.08■□□□□ 0
SNX17-208ENST00000493711 ZAP70P43403 619 aa15.08■□□□□ 0
SNX17-208ENST00000493711 GTF2IP78347 998 aa15.08■□□□□ 0
SNX17-208ENST00000493711 ZSCAN25Q6NSZ9 544 aa15.08■□□□□ 0
SNX17-208ENST00000493711 DNAJC2Q99543 621 aaKnown RBP15.08■□□□□ 0
SNX17-208ENST00000493711 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.08■□□□□ 0
SNX17-208ENST00000493711 RNF181Q9P0P0 153 aa15.08■□□□□ 0
SNX17-208ENST00000493711 IQSEC3Q9UPP2 1182 aaPredicted RBP15.08■□□□□ 0
SNX17-208ENST00000493711 ARAP2Q8WZ64 1704 aa15.07■□□□□ 0
SNX17-208ENST00000493711 CHAF1AQ13111 956 aaPredicted RBP15.07■□□□□ 0
SNX17-208ENST00000493711 SCARF1Q14162 830 aa15.07■□□□□ 0
SNX17-208ENST00000493711 C9orf131Q5VYM1 1079 aa15.07■□□□□ 0
SNX17-208ENST00000493711 TSHZ3Q63HK5 1081 aa15.07■□□□□ 0
SNX17-208ENST00000493711 CIAPIN1Q6FI81 312 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms