RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 KDM5BQ9UGL1 1544 aa19.96■□□□□ 0.79
NPHP4-209ENST00000489180 ZCRB1Q8TBF4 217 aaKnown RBP19.96■□□□□ 0.79
NPHP4-209ENST00000489180 CARD14Q9BXL6 1004 aa19.96■□□□□ 0.79
NPHP4-209ENST00000489180 COMMD10Q9Y6G5 202 aa19.96■□□□□ 0.79
NPHP4-209ENST00000489180 GPATCH8Q9UKJ3 1502 aaKnown RBP19.96■□□□□ 0.79
NPHP4-209ENST00000489180 KIF4AO95239 1232 aa19.96■□□□□ 0.79
NPHP4-209ENST00000489180 ZEB2O60315 1214 aa19.96■□□□□ 0.79
NPHP4-209ENST00000489180 RFC4P35249 363 aa19.96■□□□□ 0.79
NPHP4-209ENST00000489180 GTF2A1P52655 376 aaPredicted RBP19.96■□□□□ 0.79
NPHP4-209ENST00000489180 RASAL2Q9UJF2 1139 aa19.96■□□□□ 0.79
NPHP4-209ENST00000489180 U2AF2P26368 475 aaKnown RBP eCLIP19.95■□□□□ 0.78
NPHP4-209ENST00000489180 SYNCQ9H7C4 482 aa19.95■□□□□ 0.78
NPHP4-209ENST00000489180 SOS1Q07889 1333 aaPredicted RBP19.95■□□□□ 0.78
NPHP4-209ENST00000489180 NFATC2IPQ8NCF5 419 aa19.95■□□□□ 0.78
NPHP4-209ENST00000489180 LINS1Q8NG48 757 aa19.95■□□□□ 0.78
NPHP4-209ENST00000489180 TTC16Q8NEE8 873 aa19.95■□□□□ 0.78
NPHP4-209ENST00000489180 NGLY1Q96IV0 654 aa19.95■□□□□ 0.78
NPHP4-209ENST00000489180 ZBTB7BO15156 539 aaPredicted RBP19.95■□□□□ 0.78
NPHP4-209ENST00000489180 C6orf163Q5TEZ5 329 aa19.95■□□□□ 0.78
NPHP4-209ENST00000489180 MSL1Q68DK7 614 aa19.95■□□□□ 0.78
NPHP4-209ENST00000489180 PPP1R9BQ96SB3 815 aa19.95■□□□□ 0.78
NPHP4-209ENST00000489180 CCT6AP40227 531 aaKnown RBP19.94■□□□□ 0.78
NPHP4-209ENST00000489180 G2E3Q7L622 706 aa19.94■□□□□ 0.78
NPHP4-209ENST00000489180 DCAF8L1A6NGE4 600 aa19.94■□□□□ 0.78
NPHP4-209ENST00000489180 NSRP1Q9H0G5 558 aaKnown RBP19.94■□□□□ 0.78
NPHP4-209ENST00000489180 ATP6V1AP38606 617 aa19.94■□□□□ 0.78
NPHP4-209ENST00000489180 FAM173BQ6P4H8 233 aa19.94■□□□□ 0.78
NPHP4-209ENST00000489180 TUBB4AP04350 444 aa19.93■□□□□ 0.78
NPHP4-209ENST00000489180 NEK11Q8NG66 645 aa19.93■□□□□ 0.78
NPHP4-209ENST00000489180 MXRA7P84157 204 aa19.93■□□□□ 0.78
NPHP4-209ENST00000489180 BRAPQ7Z569 592 aa19.93■□□□□ 0.78
NPHP4-209ENST00000489180 BAG1Q99933 345 aaPredicted RBP19.93■□□□□ 0.78
NPHP4-209ENST00000489180 PLVAPQ9BX97 442 aa19.93■□□□□ 0.78
NPHP4-209ENST00000489180 C6orf50Q9HD87 102 aa19.93■□□□□ 0.78
NPHP4-209ENST00000489180 RTL9Q8NET4 1388 aa19.93■□□□□ 0.78
NPHP4-209ENST00000489180 TNNI2P48788 182 aa19.93■□□□□ 0.78
NPHP4-209ENST00000489180 GNAQP50148 359 aa19.93■□□□□ 0.78
NPHP4-209ENST00000489180 GSTA5Q7RTV2 222 aa19.93■□□□□ 0.78
NPHP4-209ENST00000489180 JAG2Q9Y219 1238 aa19.92■□□□□ 0.78
NPHP4-209ENST00000489180 NIP7Q9Y221 180 aaKnown RBP eCLIP19.92■□□□□ 0.78
NPHP4-209ENST00000489180 GRIPAP1Q4V328 841 aa19.92■□□□□ 0.78
NPHP4-209ENST00000489180 TESK2Q96S53 571 aa19.92■□□□□ 0.78
NPHP4-209ENST00000489180 ZNF174Q15697 407 aa19.92■□□□□ 0.78
NPHP4-209ENST00000489180 CCDC6Q16204 474 aa19.92■□□□□ 0.78
NPHP4-209ENST00000489180 NBPF11Q86T75 865 aa19.92■□□□□ 0.78
NPHP4-209ENST00000489180 CTNND2Q9UQB3 1225 aa19.92■□□□□ 0.78
NPHP4-209ENST00000489180 EEF2P13639 858 aaKnown RBP19.92■□□□□ 0.78
NPHP4-209ENST00000489180 PLS1Q14651 629 aa19.92■□□□□ 0.78
NPHP4-209ENST00000489180 SMARCC2Q8TAQ2 1214 aa19.92■□□□□ 0.78
NPHP4-209ENST00000489180 IQCGQ9H095 443 aaKnown RBP19.92■□□□□ 0.78
NPHP4-209ENST00000489180 GTPBP4Q9BZE4 634 aaKnown RBP19.91■□□□□ 0.78
NPHP4-209ENST00000489180 MCM9Q9NXL9 1143 aa19.91■□□□□ 0.78
NPHP4-209ENST00000489180 VWA3AA6NCI4 1184 aa19.91■□□□□ 0.78
NPHP4-209ENST00000489180 EVCP57679 992 aa19.91■□□□□ 0.78
NPHP4-209ENST00000489180 KRT79Q5XKE5 535 aa19.91■□□□□ 0.78
NPHP4-209ENST00000489180 OGFRQ9NZT2 677 aa19.91■□□□□ 0.78
NPHP4-209ENST00000489180 MYL5Q02045 173 aa19.91■□□□□ 0.78
NPHP4-209ENST00000489180 AKNAD1Q5T1N1 836 aa19.91■□□□□ 0.78
NPHP4-209ENST00000489180 CCDC121Q6ZUS5 278 aa19.91■□□□□ 0.78
NPHP4-209ENST00000489180 LUC7L2Q9Y383 392 aaKnown RBP19.91■□□□□ 0.78
NPHP4-209ENST00000489180 TLDC2A0PJX2 215 aa19.91■□□□□ 0.78
NPHP4-209ENST00000489180 BICDL2A1A5D9 508 aa19.91■□□□□ 0.78
NPHP4-209ENST00000489180 RPS6KB1P23443 525 aa19.91■□□□□ 0.78
NPHP4-209ENST00000489180 CCDC50Q8IVM0 306 aa19.91■□□□□ 0.78
NPHP4-209ENST00000489180 DENND4BO75064 1496 aaPredicted RBP19.91■□□□□ 0.78
NPHP4-209ENST00000489180 FAM160A1Q05DH4 1040 aa19.9■□□□□ 0.78
NPHP4-209ENST00000489180 TSNARE1Q96NA8 513 aa19.9■□□□□ 0.78
NPHP4-209ENST00000489180 RRP36Q96EU6 259 aaKnown RBP19.9■□□□□ 0.78
NPHP4-209ENST00000489180 AKR1B15C9JRZ8 316 aaPredicted RBP19.9■□□□□ 0.78
NPHP4-209ENST00000489180 ST5P78524 1137 aa19.9■□□□□ 0.78
NPHP4-209ENST00000489180 CCDC122Q5T0U0 273 aa19.9■□□□□ 0.78
NPHP4-209ENST00000489180 CEP57Q86XR8 500 aa19.9■□□□□ 0.78
NPHP4-209ENST00000489180 PPP2R3AQ06190 1150 aa19.89■□□□□ 0.78
NPHP4-209ENST00000489180 LMBR1Q8WVP7 490 aa19.89■□□□□ 0.78
NPHP4-209ENST00000489180 SLC27A2O14975 620 aa19.89■□□□□ 0.77
NPHP4-209ENST00000489180 SETDB2Q96T68 719 aa19.89■□□□□ 0.77
NPHP4-209ENST00000489180 NCOA5Q9HCD5 579 aaKnown RBP19.89■□□□□ 0.77
NPHP4-209ENST00000489180 SNX14Q9Y5W7 946 aa19.89■□□□□ 0.77
NPHP4-209ENST00000489180 ELP1O95163 1332 aa19.89■□□□□ 0.77
NPHP4-209ENST00000489180 MAP3K5Q99683 1374 aa19.89■□□□□ 0.77
NPHP4-209ENST00000489180 GADD45BO75293 160 aaPredicted RBP19.89■□□□□ 0.77
NPHP4-209ENST00000489180 CCDC25Q86WR0 208 aa19.89■□□□□ 0.77
NPHP4-209ENST00000489180 EBAG9O00559 213 aa19.89■□□□□ 0.77
NPHP4-209ENST00000489180 CALML3P27482 149 aa19.89■□□□□ 0.77
NPHP4-209ENST00000489180 DTHD1Q6ZMT9 781 aa19.89■□□□□ 0.77
NPHP4-209ENST00000489180 RIOK3O14730 519 aaKnown RBP19.89■□□□□ 0.77
NPHP4-209ENST00000489180 C10orf67Q8IYJ2 551 aa19.89■□□□□ 0.77
NPHP4-209ENST00000489180 EYA1Q99502 592 aa19.89■□□□□ 0.77
NPHP4-209ENST00000489180 OTUD6BQ8N6M0 293 aa19.88■□□□□ 0.77
NPHP4-209ENST00000489180 RAD50Q92878 1312 aa19.88■□□□□ 0.77
NPHP4-209ENST00000489180 CABLES1Q8TDN4 633 aa19.88■□□□□ 0.77
NPHP4-209ENST00000489180 GNAT2P19087 354 aa19.88■□□□□ 0.77
NPHP4-209ENST00000489180 ANKS4BQ8N8V4 417 aa19.88■□□□□ 0.77
NPHP4-209ENST00000489180 CCDC77Q9BR77 488 aa19.88■□□□□ 0.77
NPHP4-209ENST00000489180 PIK3C2GO75747 1445 aa19.88■□□□□ 0.77
NPHP4-209ENST00000489180 NUP160Q12769 1436 aa19.88■□□□□ 0.77
NPHP4-209ENST00000489180 NCKAP5LQ9HCH0 1330 aa19.88■□□□□ 0.77
NPHP4-209ENST00000489180 IRS4O14654 1257 aaPredicted RBP19.88■□□□□ 0.77
NPHP4-209ENST00000489180 PRPHP41219 470 aa19.88■□□□□ 0.77
NPHP4-209ENST00000489180 KLHDC4Q8TBB5 520 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms