RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 KCNQ5Q9NR82 932 aa20.53■□□□□ 0.88
NF1-211ENST00000487476 CYP2E1P05181 493 aaPredicted RBP20.53■□□□□ 0.88
NF1-211ENST00000487476 PRELPP51888 382 aa20.53■□□□□ 0.88
NF1-211ENST00000487476 TBC1D9Q6ZT07 1266 aa20.53■□□□□ 0.88
NF1-211ENST00000487476 IL1R1P14778 569 aa20.52■□□□□ 0.88
NF1-211ENST00000487476 CHAF1AQ13111 956 aaPredicted RBP20.52■□□□□ 0.88
NF1-211ENST00000487476 ARHGAP27Q6ZUM4 889 aa20.52■□□□□ 0.88
NF1-211ENST00000487476 IPO9Q96P70 1041 aaKnown RBP20.52■□□□□ 0.88
NF1-211ENST00000487476 PAG1Q9NWQ8 432 aa20.52■□□□□ 0.88
NF1-211ENST00000487476 COA1Q9GZY4 146 aa20.52■□□□□ 0.88
NF1-211ENST00000487476 COL4A5P29400 1685 aa20.5■□□□□ 0.87
NF1-211ENST00000487476 G3V3G9 751 aa20.5■□□□□ 0.87
NF1-211ENST00000487476 ECE2O60344 883 aa20.5■□□□□ 0.87
NF1-211ENST00000487476 CHGBP05060 677 aa20.5■□□□□ 0.87
NF1-211ENST00000487476 DCAF8Q5TAQ9 597 aa20.5■□□□□ 0.87
NF1-211ENST00000487476 LARGE2Q8N3Y3 721 aa20.5■□□□□ 0.87
NF1-211ENST00000487476 PIH1D3Q9NQM4 214 aaKnown RBP20.5■□□□□ 0.87
NF1-211ENST00000487476 DENND2AQ9ULE3 1009 aa20.5■□□□□ 0.87
NF1-211ENST00000487476 IARSP41252 1262 aaKnown RBP20.5■□□□□ 0.87
NF1-211ENST00000487476 AKAP11Q9UKA4 1901 aa20.49■□□□□ 0.87
NF1-211ENST00000487476 FER1L6Q2WGJ9 1857 aa20.49■□□□□ 0.87
NF1-211ENST00000487476 CNTROBQ8N137 903 aa20.49■□□□□ 0.87
NF1-211ENST00000487476 EVI5LQ96CN4 794 aa20.49■□□□□ 0.87
NF1-211ENST00000487476 ARFGEF1Q9Y6D6 1849 aa20.49■□□□□ 0.87
NF1-211ENST00000487476 YDJCA8MPS7 323 aa20.48■□□□□ 0.87
NF1-211ENST00000487476 SEMA3EO15041 775 aa20.48■□□□□ 0.87
NF1-211ENST00000487476 GTF2IP78347 998 aa20.48■□□□□ 0.87
NF1-211ENST00000487476 SLFNL1Q499Z3 407 aa20.48■□□□□ 0.87
NF1-211ENST00000487476 GPR162Q16538 588 aa20.47■□□□□ 0.87
NF1-211ENST00000487476 LTBP3Q9NS15 1303 aa20.47■□□□□ 0.87
NF1-211ENST00000487476 PODNQ7Z5L7 613 aa20.47■□□□□ 0.87
NF1-211ENST00000487476 FBXW7Q969H0 707 aa20.47■□□□□ 0.87
NF1-211ENST00000487476 FSD1Q9BTV5 496 aa20.47■□□□□ 0.87
NF1-211ENST00000487476 MXD3Q9BW11 206 aa20.47■□□□□ 0.87
NF1-211ENST00000487476 GRIK5Q16478 980 aa20.46■□□□□ 0.87
NF1-211ENST00000487476 KBTBD3Q8NAB2 608 aa20.46■□□□□ 0.87
NF1-211ENST00000487476 ABCF2Q9UG63 623 aa20.46■□□□□ 0.87
NF1-211ENST00000487476 CHD4Q14839 1912 aa20.46■□□□□ 0.87
NF1-211ENST00000487476 NBR1Q14596 966 aa20.46■□□□□ 0.87
NF1-211ENST00000487476 TTLL5Q6EMB2 1281 aa20.45■□□□□ 0.86
NF1-211ENST00000487476 VPS33BQ9H267 617 aa20.45■□□□□ 0.86
NF1-211ENST00000487476 IDH1O75874 414 aaKnown RBP20.44■□□□□ 0.86
NF1-211ENST00000487476 ZBTB22O15209 634 aa20.44■□□□□ 0.86
NF1-211ENST00000487476 NIM1KQ8IY84 436 aa20.44■□□□□ 0.86
NF1-211ENST00000487476 PDS5AQ29RF7 1337 aaKnown RBP20.44■□□□□ 0.86
NF1-211ENST00000487476 RAD17O75943 681 aa20.43■□□□□ 0.86
NF1-211ENST00000487476 PRDX5P30044 214 aa20.43■□□□□ 0.86
NF1-211ENST00000487476 C8orf34Q49A92 452 aa20.43■□□□□ 0.86
NF1-211ENST00000487476 LRP2BPQ9P2M1 347 aa20.43■□□□□ 0.86
NF1-211ENST00000487476 FAM205AQ6ZU69 1335 aa20.43■□□□□ 0.86
NF1-211ENST00000487476 DEKP35659 375 aaKnown RBP20.43■□□□□ 0.86
NF1-211ENST00000487476 TTF1Q15361 905 aaPredicted RBP20.43■□□□□ 0.86
NF1-211ENST00000487476 MFSD14BQ5SR56 506 aa20.43■□□□□ 0.86
NF1-211ENST00000487476 CERS5Q8N5B7 392 aa20.43■□□□□ 0.86
NF1-211ENST00000487476 WDR66Q8TBY9 1149 aa20.43■□□□□ 0.86
NF1-211ENST00000487476 CHMLP26374 656 aa20.42■□□□□ 0.86
NF1-211ENST00000487476 ZNRF3Q9ULT6 936 aa20.42■□□□□ 0.86
NF1-211ENST00000487476 JDP2Q8WYK2 163 aa20.42■□□□□ 0.86
NF1-211ENST00000487476 SCN9AQ15858 1988 aa20.42■□□□□ 0.86
NF1-211ENST00000487476 CDC45O75419 566 aa20.41■□□□□ 0.86
NF1-211ENST00000487476 ZNF384Q8TF68 577 aa20.41■□□□□ 0.86
NF1-211ENST00000487476 FAM227BQ96M60 508 aa20.41■□□□□ 0.86
NF1-211ENST00000487476 RAI14Q9P0K7 980 aa20.41■□□□□ 0.86
NF1-211ENST00000487476 USP17L3A6NCW0 530 aa20.41■□□□□ 0.86
NF1-211ENST00000487476 USP17L4A6NCW7 530 aa20.41■□□□□ 0.86
NF1-211ENST00000487476 LMNB1P20700 586 aa20.41■□□□□ 0.86
NF1-211ENST00000487476 DACT2Q5SW24 774 aa20.41■□□□□ 0.86
NF1-211ENST00000487476 SLC9C2Q5TAH2 1124 aa20.41■□□□□ 0.86
NF1-211ENST00000487476 USP17L1Q7RTZ2 530 aa20.41■□□□□ 0.86
NF1-211ENST00000487476 IL25Q9H293 177 aa20.41■□□□□ 0.86
NF1-211ENST00000487476 SALL1Q9NSC2 1324 aa20.4■□□□□ 0.86
NF1-211ENST00000487476 STRIP1Q5VSL9 837 aa20.4■□□□□ 0.86
NF1-211ENST00000487476 MYO5AQ9Y4I1 1855 aaKnown RBP20.4■□□□□ 0.86
NF1-211ENST00000487476 PSMD14O00487 310 aa20.39■□□□□ 0.86
NF1-211ENST00000487476 CXCL9Q07325 125 aa20.39■□□□□ 0.86
NF1-211ENST00000487476 NMIQ13287 307 aaPredicted RBP20.39■□□□□ 0.86
NF1-211ENST00000487476 CWC27Q6UX04 472 aaKnown RBP20.39■□□□□ 0.86
NF1-211ENST00000487476 MAGEB6Q8N7X4 407 aa20.39■□□□□ 0.86
NF1-211ENST00000487476 SEC62Q99442 399 aaKnown RBP20.39■□□□□ 0.86
NF1-211ENST00000487476 RNF113AO15541 343 aaKnown RBP20.39■□□□□ 0.85
NF1-211ENST00000487476 PDE6AP16499 860 aa20.39■□□□□ 0.85
NF1-211ENST00000487476 MAP3K12Q12852 859 aa20.39■□□□□ 0.85
NF1-211ENST00000487476 MYH13Q9UKX3 1938 aa20.39■□□□□ 0.85
NF1-211ENST00000487476 A0A0D9SFI3 127 aa20.38■□□□□ 0.85
NF1-211ENST00000487476 F8W031 263 aaPredicted RBP20.38■□□□□ 0.85
NF1-211ENST00000487476 LDHBP07195 334 aaKnown RBP20.38■□□□□ 0.85
NF1-211ENST00000487476 MECOMQ03112 1051 aa20.38■□□□□ 0.85
NF1-211ENST00000487476 DIAPH3Q9NSV4 1193 aa20.38■□□□□ 0.85
NF1-211ENST00000487476 SEC24BO95487 1268 aa20.38■□□□□ 0.85
NF1-211ENST00000487476 ADD2P35612 726 aa20.38■□□□□ 0.85
NF1-211ENST00000487476 TBC1D22AQ8WUA7 517 aa20.38■□□□□ 0.85
NF1-211ENST00000487476 NSUN4Q96CB9 384 aaKnown RBP20.38■□□□□ 0.85
NF1-211ENST00000487476 ZNF532Q9HCE3 1301 aa20.37■□□□□ 0.85
NF1-211ENST00000487476 TCRBV5S4A2TA0A5A2 114 aa20.37■□□□□ 0.85
NF1-211ENST00000487476 ADGRA1Q86SQ6 560 aa20.37■□□□□ 0.85
NF1-211ENST00000487476 ZGPATQ8N5A5 531 aaKnown RBP20.37■□□□□ 0.85
NF1-211ENST00000487476 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.37■□□□□ 0.855e-7■■■■■ 27.6
NF1-211ENST00000487476 RNF181Q9P0P0 153 aa20.37■□□□□ 0.85
NF1-211ENST00000487476 ZBTB12Q9Y330 459 aaPredicted RBP20.37■□□□□ 0.85
NF1-211ENST00000487476 FZD9O00144 591 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms