RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 IL16Q14005 1332 aa8.28□□□□□ -1.08
CTDSPL-208ENST00000486978 ECM2O94769 699 aaPredicted RBP8.27□□□□□ -1.09
CTDSPL-208ENST00000486978 SASH1O94885 1247 aa8.27□□□□□ -1.09
CTDSPL-208ENST00000486978 COL9A1P20849 921 aa8.27□□□□□ -1.09
CTDSPL-208ENST00000486978 CTGFP29279 349 aa8.27□□□□□ -1.09
CTDSPL-208ENST00000486978 ANKRD13DQ6ZTN6 518 aa8.27□□□□□ -1.09
CTDSPL-208ENST00000486978 NBPF11Q86T75 865 aa8.27□□□□□ -1.09
CTDSPL-208ENST00000486978 C8orf58Q8NAV2 365 aa8.27□□□□□ -1.09
CTDSPL-208ENST00000486978 TSR2Q969E8 191 aaKnown RBP8.27□□□□□ -1.09
CTDSPL-208ENST00000486978 SLC10A4Q96EP9 437 aa8.27□□□□□ -1.09
CTDSPL-208ENST00000486978 PCDHAC2Q9Y5I4 1007 aa8.27□□□□□ -1.09
CTDSPL-208ENST00000486978 TESPA1A2RU30 521 aaPredicted RBP8.26□□□□□ -1.09
CTDSPL-208ENST00000486978 PITPNM1O00562 1244 aa8.26□□□□□ -1.09
CTDSPL-208ENST00000486978 INHBEP58166 350 aa8.26□□□□□ -1.09
CTDSPL-208ENST00000486978 GOLGA2Q08379 1002 aa8.26□□□□□ -1.09
CTDSPL-208ENST00000486978 CCDC30Q5VVM6 783 aa8.26□□□□□ -1.09
CTDSPL-208ENST00000486978 ARMC9Q7Z3E5 817 aa8.26□□□□□ -1.09
CTDSPL-208ENST00000486978 FAM9BQ8IZU0 186 aa8.26□□□□□ -1.09
CTDSPL-208ENST00000486978 TSPYL6Q8N831 410 aa8.26□□□□□ -1.09
CTDSPL-208ENST00000486978 TRMT112Q9UI30 125 aaKnown RBP8.26□□□□□ -1.09
CTDSPL-208ENST00000486978 AOX1Q06278 1338 aa8.26□□□□□ -1.09
CTDSPL-208ENST00000486978 A0A1W2PPC1 479 aa8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 BCAMP50895 628 aa8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 MAP3K11Q16584 847 aa8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 WDR63Q8IWG1 891 aa8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 SPDYE1Q8NFV5 336 aaPredicted RBP8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 ZBED3Q96IU2 234 aaPredicted RBP8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 MS4A4AQ96JQ5 239 aa8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 GUCD1Q96NT3 240 aa8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 GDF15Q99988 308 aa8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 ISCA1Q9BUE6 129 aa8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 ZC3H12CQ9C0D7 883 aaKnown RBP8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 PHAXQ9H814 394 aaKnown RBP8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 SEC31BQ9NQW1 1179 aa8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 SALL2Q9Y467 1007 aaPredicted RBP8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 REV3LO60673 3130 aa8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 SH3TC1Q8TE82 1336 aa8.25□□□□□ -1.09
CTDSPL-208ENST00000486978 ATP5J2-PTCD1G3V325 749 aa8.24□□□□□ -1.09
CTDSPL-208ENST00000486978 USP2O75604 605 aaPredicted RBP8.24□□□□□ -1.09
CTDSPL-208ENST00000486978 DDX58O95786 925 aaKnown RBP8.24□□□□□ -1.09
CTDSPL-208ENST00000486978 ZBTB48P10074 688 aaPredicted RBP8.24□□□□□ -1.09
CTDSPL-208ENST00000486978 TRIM28Q13263 835 aaKnown RBP8.24□□□□□ -1.09
CTDSPL-208ENST00000486978 SF3B3Q15393 1217 aaKnown RBP8.24□□□□□ -1.09
CTDSPL-208ENST00000486978 TWISTNBQ3B726 338 aaPredicted RBP8.24□□□□□ -1.09
CTDSPL-208ENST00000486978 RIC3Q7Z5B4 369 aa8.24□□□□□ -1.09
CTDSPL-208ENST00000486978 FAM43AQ8N2R8 423 aa8.24□□□□□ -1.09
CTDSPL-208ENST00000486978 BRI3BPQ8WY22 251 aa8.24□□□□□ -1.09
CTDSPL-208ENST00000486978 EYA3Q99504 573 aa8.24□□□□□ -1.09
CTDSPL-208ENST00000486978 STK31Q9BXU1 1019 aa8.24□□□□□ -1.09
CTDSPL-208ENST00000486978 FANCIQ9NVI1 1328 aa8.24□□□□□ -1.09
CTDSPL-208ENST00000486978 ECM29Q5VYK3 1845 aa8.24□□□□□ -1.09
CTDSPL-208ENST00000486978 USP17L3A6NCW0 530 aa8.23□□□□□ -1.09
CTDSPL-208ENST00000486978 USP17L4A6NCW7 530 aa8.23□□□□□ -1.09
CTDSPL-208ENST00000486978 UFL1O94874 794 aa8.23□□□□□ -1.09
CTDSPL-208ENST00000486978 GJA8P48165 433 aa8.23□□□□□ -1.09
CTDSPL-208ENST00000486978 RTL5Q5HYW3 569 aaPredicted RBP8.23□□□□□ -1.09
CTDSPL-208ENST00000486978 DACT2Q5SW24 774 aa8.23□□□□□ -1.09
CTDSPL-208ENST00000486978 GPR153Q6NV75 609 aa8.23□□□□□ -1.09
CTDSPL-208ENST00000486978 POTEHQ6S545 545 aa8.23□□□□□ -1.09
CTDSPL-208ENST00000486978 USP17L1Q7RTZ2 530 aa8.23□□□□□ -1.09
CTDSPL-208ENST00000486978 TMC4Q7Z404 712 aa8.23□□□□□ -1.09
CTDSPL-208ENST00000486978 FAM89AQ96GI7 184 aa8.23□□□□□ -1.09
CTDSPL-208ENST00000486978 PODXL2Q9NZ53 605 aa8.23□□□□□ -1.09
CTDSPL-208ENST00000486978 SPEF2Q9C093 1822 aa8.23□□□□□ -1.09
CTDSPL-208ENST00000486978 TTC28Q96AY4 2481 aa8.23□□□□□ -1.09
CTDSPL-208ENST00000486978 CCL5P13501 91 aa8.22□□□□□ -1.09
CTDSPL-208ENST00000486978 NF2P35240 595 aa8.22□□□□□ -1.09
CTDSPL-208ENST00000486978 RPS8P62241 208 aaKnown RBP8.22□□□□□ -1.09
CTDSPL-208ENST00000486978 NBPF12Q5TAG4 269 aaPredicted RBP8.22□□□□□ -1.09
CTDSPL-208ENST00000486978 ZBTB38Q8NAP3 1195 aaPredicted RBP8.22□□□□□ -1.09
CTDSPL-208ENST00000486978 CCDC191Q8NCU4 936 aa8.22□□□□□ -1.09
CTDSPL-208ENST00000486978 MYD88Q99836 296 aa8.22□□□□□ -1.09
CTDSPL-208ENST00000486978 METTL22Q9BUU2 404 aaPredicted RBP8.22□□□□□ -1.09
CTDSPL-208ENST00000486978 NR2E3Q9Y5X4 410 aa8.22□□□□□ -1.09
CTDSPL-208ENST00000486978 MGAMO43451 1857 aa8.21□□□□□ -1.09
CTDSPL-208ENST00000486978 IRS4O14654 1257 aaPredicted RBP8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 PCCAP05165 728 aaPredicted RBP8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 HSP90B1P14625 803 aaKnown RBP8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 BMP8BP34820 402 aa8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 EXOSC9Q06265 439 aaKnown RBP8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 TAF1CQ15572 869 aaPredicted RBP8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 KSR2Q6VAB6 950 aa8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 TXNRD3Q86VQ6 643 aa8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 CDAN1Q8IWY9 1227 aa8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 HTATIP2Q9BUP3 242 aa8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 DEFB129Q9H1M3 183 aa8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 MYH16Q9H6N6 1097 aa8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 ELP3Q9H9T3 547 aa8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 CWC25Q9NXE8 425 aaPredicted RBP8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 GGA1Q9UJY5 639 aa8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 ZMYND8Q9ULU4 1186 aaPredicted RBP8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 MAP3K2Q9Y2U5 619 aa8.21□□□□□ -1.1
CTDSPL-208ENST00000486978 PI4KAP2A4QPH2 592 aa8.2□□□□□ -1.1
CTDSPL-208ENST00000486978 G3V3G9 751 aa8.2□□□□□ -1.1
CTDSPL-208ENST00000486978 EVI5O60447 810 aa8.2□□□□□ -1.1
CTDSPL-208ENST00000486978 VAMP4O75379 141 aa8.2□□□□□ -1.1
CTDSPL-208ENST00000486978 FARP2O94887 1054 aaPredicted RBP8.2□□□□□ -1.1
CTDSPL-208ENST00000486978 GJB1P08034 283 aa8.2□□□□□ -1.1
CTDSPL-208ENST00000486978 SYN1P17600 705 aa8.2□□□□□ -1.1
CTDSPL-208ENST00000486978 LACTBP83111 547 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms