RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 CCDC61Q9Y6R9 512 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 SATB1Q01826 763 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 PPP1R7Q15435 360 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 IQCA1Q86XH1 822 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 ZNF444Q8N0Y2 327 aaPredicted RBP9.92□□□□□ -0.82
GABRE-209ENST00000486255 SPAG5Q96R06 1193 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 ZNF219Q9P2Y4 722 aaPredicted RBP9.92□□□□□ -0.82
GABRE-209ENST00000486255 TLDC2A0PJX2 215 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 MAP2K2P36507 400 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 CHMP4BP1P59074 171 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 MAP7Q14244 749 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 HS1BP3Q53T59 392 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 CCDC25Q86WR0 208 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 VPS52Q8N1B4 723 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 TSPYL2Q9H2G4 693 aaPredicted RBP9.92□□□□□ -0.82
GABRE-209ENST00000486255 NKIRAS1Q9NYS0 192 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 SPG7Q9UQ90 795 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 AFMP43652 599 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 TNNC1P63316 161 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 LRCH2Q5VUJ6 765 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 ZNF354CQ86Y25 554 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 CCDC170Q8IYT3 715 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 WHAMMQ8TF30 809 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 BICD1Q96G01 975 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 NKTRP30414 1462 aaKnown RBP9.91□□□□□ -0.82
GABRE-209ENST00000486255 SKAP1Q86WV1 359 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 NUF2Q9BZD4 464 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 DNAJC25Q9H1X3 360 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 RNF41Q9H4P4 317 aaPredicted RBP9.91□□□□□ -0.82
GABRE-209ENST00000486255 GUCA1BQ9UMX6 200 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 PLA2R1Q13018 1463 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 CRACR2BQ8N4Y2 399 aaPredicted RBP9.91□□□□□ -0.82
GABRE-209ENST00000486255 ABCF2Q9UG63 623 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 USP16Q9Y5T5 823 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 MRVI1Q9Y6F6 885 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 GLI2P10070 1586 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 INSRP06213 1382 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 PIK3C2GO75747 1445 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 STAT6P42226 847 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 TTF1Q15361 905 aaPredicted RBP9.91□□□□□ -0.82
GABRE-209ENST00000486255 HSP90AA4PQ58FG1 418 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 PHLDB2Q86SQ0 1253 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 JAKMIP2Q96AA8 810 aa9.91□□□□□ -0.82
GABRE-209ENST00000486255 TUBBP07437 444 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 IARSP41252 1262 aaKnown RBP9.9□□□□□ -0.82
GABRE-209ENST00000486255 TBC1D9Q6ZT07 1266 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 ARHGEF2Q92974 986 aaKnown RBP9.9□□□□□ -0.82
GABRE-209ENST00000486255 KDM5AP29375 1690 aaKnown RBP9.9□□□□□ -0.82
GABRE-209ENST00000486255 TBCAO75347 108 aaKnown RBP9.9□□□□□ -0.82
GABRE-209ENST00000486255 EEF2P13639 858 aaKnown RBP9.9□□□□□ -0.82
GABRE-209ENST00000486255 U2AF2P26368 475 aaKnown RBP eCLIP9.9□□□□□ -0.826e-7■■■■□ 20.7
GABRE-209ENST00000486255 HPDP32754 393 aaPredicted RBP9.9□□□□□ -0.82
GABRE-209ENST00000486255 ZC3H6P61129 1189 aaKnown RBP9.9□□□□□ -0.82
GABRE-209ENST00000486255 GBP5Q96PP8 586 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 LZTFL1Q9NQ48 299 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 YTHDC2Q9H6S0 1430 aaKnown RBP9.9□□□□□ -0.82
GABRE-209ENST00000486255 SH3BP5O60239 455 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 GIGYF1O75420 1035 aaPredicted RBP9.9□□□□□ -0.82
GABRE-209ENST00000486255 STMN1P16949 149 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 ARHGAP25P42331 645 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 METAP2P50579 478 aaKnown RBP eCLIP9.9□□□□□ -0.82
GABRE-209ENST00000486255 ZNF131P52739 623 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 HSPA2P54652 639 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 KIAA1524Q8TCG1 905 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 SBNO2Q9Y2G9 1366 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 RNF10Q8N5U6 811 aaKnown RBP9.9□□□□□ -0.82
GABRE-209ENST00000486255 EVI5LQ96CN4 794 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 ERO1AQ96HE7 468 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 SLC26A6Q9BXS9 759 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 PRDM11Q9NQV5 511 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 WWC3Q9ULE0 1092 aa9.9□□□□□ -0.82
GABRE-209ENST00000486255 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.9□□□□□ -0.82
GABRE-209ENST00000486255 UBA7P41226 1012 aa9.9□□□□□ -0.83
GABRE-209ENST00000486255 GABPB1Q06547 395 aaPredicted RBP9.9□□□□□ -0.83
GABRE-209ENST00000486255 SPAG1Q07617 926 aa9.9□□□□□ -0.83
GABRE-209ENST00000486255 TMEM67Q5HYA8 995 aa9.9□□□□□ -0.83
GABRE-209ENST00000486255 LRPPRCP42704 1394 aaKnown RBP9.89□□□□□ -0.83
GABRE-209ENST00000486255 FLIIQ13045 1269 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 SH2D4BQ5SQS7 431 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 ZNF530Q6P9A1 599 aaPredicted RBP9.89□□□□□ -0.83
GABRE-209ENST00000486255 TXNDC16Q9P2K2 825 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 GCKP35557 465 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 EVCP57679 992 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 ZNF365Q70YC5 407 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 BANK1Q8NDB2 785 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 TXNDC9O14530 226 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 NDUFAB1O14561 156 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 CCDC38Q502W7 563 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 CAVIN4Q5BKX8 364 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 MYCBPQ99417 103 aaPredicted RBP9.89□□□□□ -0.83
GABRE-209ENST00000486255 ORC3Q9UBD5 711 aaPredicted RBP9.89□□□□□ -0.83
GABRE-209ENST00000486255 RTL1A6NKG5 1358 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 MAP3K12Q12852 859 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 TRPC3Q13507 836 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 WHAMMP3Q1A5X7 153 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 TBC1D32Q96NH3 1257 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 BEGAINQ9BUH8 593 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 USH1CQ9Y6N9 552 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 FAM169AQ9Y6X4 670 aa9.89□□□□□ -0.83
GABRE-209ENST00000486255 CLTCL1P53675 1640 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms