RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 PROSER3Q2NL68 480 aa13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 ZNF530Q6P9A1 599 aaPredicted RBP13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 FUT8Q9BYC5 575 aa13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 VPS18Q9P253 973 aa13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 DNAI1Q9UI46 699 aa13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 ADAMTS7Q9UKP4 1686 aa13.39□□□□□ -0.27
SEC61A1-205ENST00000483956 IQCB1Q15051 598 aa13.38□□□□□ -0.27
SEC61A1-205ENST00000483956 AMOTQ4VCS5 1084 aa13.38□□□□□ -0.27
SEC61A1-205ENST00000483956 PLEKHO1Q53GL0 409 aaPredicted RBP13.38□□□□□ -0.27
SEC61A1-205ENST00000483956 ZNF589Q86UQ0 364 aaPredicted RBP13.38□□□□□ -0.27
SEC61A1-205ENST00000483956 BICD2Q8TD16 824 aa13.38□□□□□ -0.27
SEC61A1-205ENST00000483956 CEP89Q96ST8 783 aa13.38□□□□□ -0.27
SEC61A1-205ENST00000483956 TLR7Q9NYK1 1049 aaKnown RBP13.38□□□□□ -0.27
SEC61A1-205ENST00000483956 C11orf57Q6ZUT1 292 aaPredicted RBP13.38□□□□□ -0.27
SEC61A1-205ENST00000483956 HOMER1Q86YM7 354 aa13.38□□□□□ -0.27
SEC61A1-205ENST00000483956 TCEANC2Q96MN5 208 aa13.38□□□□□ -0.27
SEC61A1-205ENST00000483956 CCDC8Q9H0W5 538 aaPredicted RBP13.38□□□□□ -0.27
SEC61A1-205ENST00000483956 CFAP45Q9UL16 551 aa13.38□□□□□ -0.27
SEC61A1-205ENST00000483956 PXDNQ92626 1479 aa13.37□□□□□ -0.27
SEC61A1-205ENST00000483956 RNMTO43148 476 aaKnown RBP13.37□□□□□ -0.27
SEC61A1-205ENST00000483956 TTLL5Q6EMB2 1281 aa13.37□□□□□ -0.27
SEC61A1-205ENST00000483956 BOLA2Q9H3K6 86 aa13.37□□□□□ -0.27
SEC61A1-205ENST00000483956 ARFGAP3Q9NP61 516 aa13.37□□□□□ -0.27
SEC61A1-205ENST00000483956 CTAGE5O15320 804 aa13.37□□□□□ -0.27
SEC61A1-205ENST00000483956 DDX58O95786 925 aaKnown RBP13.37□□□□□ -0.27
SEC61A1-205ENST00000483956 PLEKHA4Q9H4M7 779 aa13.37□□□□□ -0.27
SEC61A1-205ENST00000483956 CAMTA1Q9Y6Y1 1673 aa13.37□□□□□ -0.27
SEC61A1-205ENST00000483956 EFCAB8A8MWE9 144 aa13.37□□□□□ -0.27
SEC61A1-205ENST00000483956 URI1O94763 535 aaPredicted RBP13.37□□□□□ -0.27
SEC61A1-205ENST00000483956 CPP00450 1065 aa13.37□□□□□ -0.27
SEC61A1-205ENST00000483956 BRF1Q92994 677 aa13.37□□□□□ -0.27
SEC61A1-205ENST00000483956 FANCGO15287 622 aa13.36□□□□□ -0.27
SEC61A1-205ENST00000483956 MPRIPQ6WCQ1 1025 aa13.36□□□□□ -0.27
SEC61A1-205ENST00000483956 CEP120Q8N960 986 aa13.36□□□□□ -0.27
SEC61A1-205ENST00000483956 LLPHQ9BRT6 129 aaKnown RBP13.36□□□□□ -0.27
SEC61A1-205ENST00000483956 JAK2O60674 1132 aa13.36□□□□□ -0.27
SEC61A1-205ENST00000483956 STK3Q13188 491 aa13.36□□□□□ -0.27
SEC61A1-205ENST00000483956 GRIPAP1Q4V328 841 aa13.36□□□□□ -0.27
SEC61A1-205ENST00000483956 SMARCC2Q8TAQ2 1214 aa13.36□□□□□ -0.27
SEC61A1-205ENST00000483956 RNF217Q8TC41 542 aa13.36□□□□□ -0.27
SEC61A1-205ENST00000483956 NEK1Q96PY6 1258 aa13.36□□□□□ -0.27
SEC61A1-205ENST00000483956 COL15A1P39059 1388 aa13.35□□□□□ -0.27
SEC61A1-205ENST00000483956 GOLIM4O00461 696 aa13.35□□□□□ -0.27
SEC61A1-205ENST00000483956 RPS6KA5O75582 802 aa13.35□□□□□ -0.27
SEC61A1-205ENST00000483956 ETF1P62495 437 aaKnown RBP13.35□□□□□ -0.27
SEC61A1-205ENST00000483956 GNL2Q13823 731 aaKnown RBP13.35□□□□□ -0.27
SEC61A1-205ENST00000483956 STX1AQ16623 288 aa13.35□□□□□ -0.27
SEC61A1-205ENST00000483956 HSP90AB3PQ58FF7 597 aa13.35□□□□□ -0.27
SEC61A1-205ENST00000483956 MICALL1Q8N3F8 863 aa13.35□□□□□ -0.27
SEC61A1-205ENST00000483956 DDX21Q9NR30 783 aaKnown RBP eCLIP13.35□□□□□ -0.27
SEC61A1-205ENST00000483956 U3KPZ7 1027 aaPredicted RBP13.35□□□□□ -0.27
SEC61A1-205ENST00000483956 A0A087WWV3 80 aa13.35□□□□□ -0.27
SEC61A1-205ENST00000483956 ATP5JP18859 108 aa13.35□□□□□ -0.27
SEC61A1-205ENST00000483956 NAA16Q6N069 864 aaPredicted RBP13.35□□□□□ -0.27
SEC61A1-205ENST00000483956 SGSM3Q96HU1 749 aa13.35□□□□□ -0.27
SEC61A1-205ENST00000483956 TPM1P09493 284 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 TADA2BQ86TJ2 420 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 EFCAB13Q8IY85 973 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 KCNH5Q8NCM2 988 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 PDE11AQ9HCR9 933 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 PSDA5PKW4 1024 aaPredicted RBP13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 H3BQV1 296 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 SMC2O95347 1197 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 ADD1P35611 737 aaKnown RBP13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 MNAT1P51948 309 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 C1orf141Q5JVX7 400 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 IFFO2Q5TF58 517 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 ATL3Q6DD88 541 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 RCOR1Q9UKL0 485 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 IGKV5-2P06315 115 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 PPP2R5AQ15172 486 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 LONRF2Q1L5Z9 754 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 LRRC31Q6UY01 552 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 PARD6BQ9BYG5 372 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 PHF8Q9UPP1 1060 aa13.34□□□□□ -0.27
SEC61A1-205ENST00000483956 LAMA4Q16363 1823 aa13.33□□□□□ -0.27
SEC61A1-205ENST00000483956 SETD1BQ9UPS6 1966 aaKnown RBP13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 CCDC196A0A1B0GTZ2 297 aa13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 BECN2A8MW95 431 aa13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 IRF6O14896 467 aa13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 KCNA6P17658 529 aa13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 GSDMDP57764 484 aa13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 LRRFIP1Q32MZ4 808 aaKnown RBP13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 Q6ZUG5 572 aa13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 KAT2BQ92831 832 aa13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 COPRSQ9NQ92 184 aa13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 PHLPP2Q6ZVD8 1323 aa13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 ZNF609O15014 1411 aa13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 PFKFB2O60825 505 aa13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 N4BP1O75113 896 aaKnown RBP13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 PDIA6Q15084 440 aa13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 ZRSR1Q15695 479 aaKnown RBP13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 ARMCX5Q6P1M9 558 aa13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 NBPF11Q86T75 865 aa13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 GPR161Q8N6U8 529 aaKnown RBP13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 MKRN1Q9UHC7 482 aaKnown RBP13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 PARP3Q9Y6F1 533 aa13.33□□□□□ -0.28
SEC61A1-205ENST00000483956 LRCH2Q5VUJ6 765 aa13.32□□□□□ -0.28
SEC61A1-205ENST00000483956 C14orf37Q86TY3 774 aa13.32□□□□□ -0.28
SEC61A1-205ENST00000483956 RPAINQ86UA6 219 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms