RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 C11orf16Q9NQ32 467 aa9.08□□□□□ -0.96
CHD6-209ENST00000482596 KIF7Q2M1P5 1343 aa9.07□□□□□ -0.96
CHD6-209ENST00000482596 FAM86C2PA6NEL3 165 aa9.07□□□□□ -0.96
CHD6-209ENST00000482596 GTF2E1P29083 439 aaPredicted RBP9.07□□□□□ -0.96
CHD6-209ENST00000482596 EIF4A2Q14240 407 aaKnown RBP9.07□□□□□ -0.96
CHD6-209ENST00000482596 ARHGEF6Q15052 776 aa9.07□□□□□ -0.96
CHD6-209ENST00000482596 TMEM31Q5JXX7 168 aa9.07□□□□□ -0.96
CHD6-209ENST00000482596 DPP8Q6V1X1 898 aaPredicted RBP9.07□□□□□ -0.96
CHD6-209ENST00000482596 WNK4Q96J92 1243 aa9.07□□□□□ -0.96
CHD6-209ENST00000482596 CLMNQ96JQ2 1002 aa9.07□□□□□ -0.96
CHD6-209ENST00000482596 CRAMP1Q96RY5 1269 aa9.07□□□□□ -0.96
CHD6-209ENST00000482596 UNC93B1Q9H1C4 597 aa9.07□□□□□ -0.96
CHD6-209ENST00000482596 DBNDD1Q9H9R9 158 aa9.07□□□□□ -0.96
CHD6-209ENST00000482596 ATP6V0A2Q9Y487 856 aa9.07□□□□□ -0.96
CHD6-209ENST00000482596 PCDHGA4Q9Y5G9 962 aa9.07□□□□□ -0.96
CHD6-209ENST00000482596 XIRP2A4UGR9 3374 aa9.06□□□□□ -0.96
CHD6-209ENST00000482596 RPS12P25398 132 aaKnown RBP9.06□□□□□ -0.96
CHD6-209ENST00000482596 GRK4P32298 578 aa9.06□□□□□ -0.96
CHD6-209ENST00000482596 GJA5P36382 358 aa9.06□□□□□ -0.96
CHD6-209ENST00000482596 MDM2Q00987 491 aaPredicted RBP9.06□□□□□ -0.96
CHD6-209ENST00000482596 CLEC4GQ6UXB4 293 aa9.06□□□□□ -0.96
CHD6-209ENST00000482596 KHSRPQ92945 711 aaKnown RBP eCLIP9.06□□□□□ -0.966e-7■■■□□ 17.9
CHD6-209ENST00000482596 RBM17Q96I25 401 aaKnown RBP9.06□□□□□ -0.96
CHD6-209ENST00000482596 POTEB3A0JP26 581 aa9.05□□□□□ -0.96
CHD6-209ENST00000482596 CTGFP29279 349 aa9.05□□□□□ -0.96
CHD6-209ENST00000482596 NHLH1Q02575 133 aa9.05□□□□□ -0.96
CHD6-209ENST00000482596 AMOTQ4VCS5 1084 aa9.05□□□□□ -0.96
CHD6-209ENST00000482596 PPP1R15BQ5SWA1 713 aa9.05□□□□□ -0.96
CHD6-209ENST00000482596 POTEBQ6S5H4 581 aa9.05□□□□□ -0.96
CHD6-209ENST00000482596 ATXN2LQ8WWM7 1075 aaKnown RBP9.05□□□□□ -0.96
CHD6-209ENST00000482596 SLC10A4Q96EP9 437 aa9.05□□□□□ -0.96
CHD6-209ENST00000482596 ZNF496Q96IT1 587 aaPredicted RBP9.05□□□□□ -0.96
CHD6-209ENST00000482596 LARP6Q9BRS8 491 aaKnown RBP9.05□□□□□ -0.96
CHD6-209ENST00000482596 ANGEL1Q9UNK9 670 aaKnown RBP9.05□□□□□ -0.96
CHD6-209ENST00000482596 RIPOR2Q9Y4F9 1068 aa9.05□□□□□ -0.96
CHD6-209ENST00000482596 KMT2BQ9UMN6 2715 aaPredicted RBP9.05□□□□□ -0.96
CHD6-209ENST00000482596 REV3LO60673 3130 aa9.05□□□□□ -0.96
CHD6-209ENST00000482596 C5orf42Q9H799 3197 aa9.04□□□□□ -0.96
CHD6-209ENST00000482596 TFRCP02786 760 aaKnown RBP9.04□□□□□ -0.96
CHD6-209ENST00000482596 ZBTB48P10074 688 aaPredicted RBP9.04□□□□□ -0.96
CHD6-209ENST00000482596 FOXK2Q01167 660 aa9.04□□□□□ -0.96
CHD6-209ENST00000482596 OTUD7BQ6GQQ9 843 aa9.04□□□□□ -0.96
CHD6-209ENST00000482596 ARMC9Q7Z3E5 817 aa9.04□□□□□ -0.96
CHD6-209ENST00000482596 PPM1EQ8WY54 764 aa9.04□□□□□ -0.96
CHD6-209ENST00000482596 ROCK2O75116 1388 aaKnown RBP9.03□□□□□ -0.96
CHD6-209ENST00000482596 CHD8Q9HCK8 2581 aa9.03□□□□□ -0.96
CHD6-209ENST00000482596 NUDT7P0C024 238 aa9.03□□□□□ -0.96
CHD6-209ENST00000482596 LACTBP83111 547 aaPredicted RBP9.03□□□□□ -0.96
CHD6-209ENST00000482596 TAF1CQ15572 869 aaPredicted RBP9.03□□□□□ -0.96
CHD6-209ENST00000482596 VARS2Q5ST30 1063 aaKnown RBP9.03□□□□□ -0.96
CHD6-209ENST00000482596 NPM2Q86SE8 214 aaKnown RBP9.03□□□□□ -0.96
CHD6-209ENST00000482596 AEBP1Q8IUX7 1158 aa9.03□□□□□ -0.96
CHD6-209ENST00000482596 PTCD2Q8WV60 388 aaKnown RBP9.03□□□□□ -0.96
CHD6-209ENST00000482596 THEGQ9P2T0 379 aa9.03□□□□□ -0.96
CHD6-209ENST00000482596 BIN2Q9UBW5 565 aaPredicted RBP9.03□□□□□ -0.96
CHD6-209ENST00000482596 TIMELESSQ9UNS1 1208 aa9.03□□□□□ -0.96
CHD6-209ENST00000482596 ZNF652Q9Y2D9 606 aa9.03□□□□□ -0.96
CHD6-209ENST00000482596 DDX60Q8IY21 1712 aaKnown RBP9.02□□□□□ -0.96
CHD6-209ENST00000482596 TESPA1A2RU30 521 aaPredicted RBP9.02□□□□□ -0.97
CHD6-209ENST00000482596 NBPF26B4DH59 902 aa9.02□□□□□ -0.97
CHD6-209ENST00000482596 NF2P35240 595 aa9.02□□□□□ -0.97
CHD6-209ENST00000482596 ZNF280AP59817 542 aaPredicted RBP9.02□□□□□ -0.97
CHD6-209ENST00000482596 HLFQ16534 295 aa9.02□□□□□ -0.97
CHD6-209ENST00000482596 NBPF9Q3BBW0 867 aa9.02□□□□□ -0.97
CHD6-209ENST00000482596 NECAB2Q7Z6G3 386 aa9.02□□□□□ -0.97
CHD6-209ENST00000482596 DDX27Q96GQ7 796 aaKnown RBP9.02□□□□□ -0.97
CHD6-209ENST00000482596 DEFB118Q96PH6 123 aa9.02□□□□□ -0.97
CHD6-209ENST00000482596 TMX4Q9H1E5 349 aaPredicted RBP9.02□□□□□ -0.97
CHD6-209ENST00000482596 SRRDQ9UH36 339 aa9.02□□□□□ -0.97
CHD6-209ENST00000482596 EPG5Q9HCE0 2579 aa9.02□□□□□ -0.97
CHD6-209ENST00000482596 ABCC4O15439 1325 aa9.02□□□□□ -0.97
CHD6-209ENST00000482596 HEG1Q9ULI3 1381 aa9.01□□□□□ -0.97
CHD6-209ENST00000482596 ZNF316A6NFI3 1004 aaPredicted RBP9.01□□□□□ -0.97
CHD6-209ENST00000482596 RNMTO43148 476 aaKnown RBP9.01□□□□□ -0.97
CHD6-209ENST00000482596 ECE2O60344 883 aa9.01□□□□□ -0.97
CHD6-209ENST00000482596 TBC1D12O60347 775 aa9.01□□□□□ -0.97
CHD6-209ENST00000482596 GPR37L1O60883 481 aa9.01□□□□□ -0.97
CHD6-209ENST00000482596 PRMT2P55345 433 aa9.01□□□□□ -0.97
CHD6-209ENST00000482596 MRPS5P82675 430 aaKnown RBP9.01□□□□□ -0.97
CHD6-209ENST00000482596 DDX60LQ5H9U9 1706 aaKnown RBP9.01□□□□□ -0.97
CHD6-209ENST00000482596 RAET1EQ8TD07 263 aa9.01□□□□□ -0.97
CHD6-209ENST00000482596 PHOX2BQ99453 314 aa9.01□□□□□ -0.97
CHD6-209ENST00000482596 ZFYVE28Q9HCC9 887 aa9.01□□□□□ -0.97
CHD6-209ENST00000482596 FAM205AQ6ZU69 1335 aa9.01□□□□□ -0.97
CHD6-209ENST00000482596 DNAH12Q6ZR08 3092 aa9□□□□□ -0.97
CHD6-209ENST00000482596 VIL1P09327 827 aaKnown RBP9□□□□□ -0.97
CHD6-209ENST00000482596 OSBPP22059 807 aa9□□□□□ -0.97
CHD6-209ENST00000482596 UBXN2AP68543 259 aa9□□□□□ -0.97
CHD6-209ENST00000482596 KIF22Q14807 665 aa9□□□□□ -0.97
CHD6-209ENST00000482596 TRIM47Q96LD4 638 aa9□□□□□ -0.97
CHD6-209ENST00000482596 MYOZ2Q9NPC6 264 aa9□□□□□ -0.97
CHD6-209ENST00000482596 LAMB2P55268 1798 aa8.99□□□□□ -0.97
CHD6-209ENST00000482596 SMIM22K7EJ46 135 aa8.99□□□□□ -0.97
CHD6-209ENST00000482596 MFSD10Q14728 455 aa8.99□□□□□ -0.97
CHD6-209ENST00000482596 GRIN2CQ14957 1233 aa8.99□□□□□ -0.97
CHD6-209ENST00000482596 POTEEQ6S8J3 1075 aa8.99□□□□□ -0.97
CHD6-209ENST00000482596 SP8Q8IXZ3 490 aa8.99□□□□□ -0.97
CHD6-209ENST00000482596 FAM43AQ8N2R8 423 aa8.99□□□□□ -0.97
CHD6-209ENST00000482596 BRI3BPQ8WY22 251 aa8.99□□□□□ -0.97
CHD6-209ENST00000482596 POLKQ9UBT6 870 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms