RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 ABCC4O15439 1325 aa9.43□□□□□ -0.9
SSR1-206ENST00000479365 ELL2O00472 640 aaPredicted RBP9.43□□□□□ -0.9
SSR1-206ENST00000479365 TCERG1O14776 1098 aaKnown RBP9.43□□□□□ -0.9
SSR1-206ENST00000479365 PPEF1O14829 653 aaPredicted RBP9.43□□□□□ -0.9
SSR1-206ENST00000479365 ACTN4O43707 911 aaKnown RBP9.43□□□□□ -0.9
SSR1-206ENST00000479365 HCLS1P14317 486 aaPredicted RBP9.43□□□□□ -0.9
SSR1-206ENST00000479365 FUT2Q10981 343 aa9.43□□□□□ -0.9
SSR1-206ENST00000479365 C8orf58Q8NAV2 365 aa9.43□□□□□ -0.9
SSR1-206ENST00000479365 RETREG2Q8NC44 543 aa9.43□□□□□ -0.9
SSR1-206ENST00000479365 PLBD2Q8NHP8 589 aa9.43□□□□□ -0.9
SSR1-206ENST00000479365 SPIRE2Q8WWL2 714 aa9.43□□□□□ -0.9
SSR1-206ENST00000479365 RBM17Q96I25 401 aaKnown RBP9.43□□□□□ -0.9
SSR1-206ENST00000479365 NLRP3Q96P20 1036 aa9.43□□□□□ -0.9
SSR1-206ENST00000479365 ISCA1Q9BUE6 129 aa9.43□□□□□ -0.9
SSR1-206ENST00000479365 POLR3EQ9NVU0 708 aa9.43□□□□□ -0.9
SSR1-206ENST00000479365 DBF4Q9UBU7 674 aaPredicted RBP9.43□□□□□ -0.9
SSR1-206ENST00000479365 COL4A1P02462 1669 aa9.42□□□□□ -0.9
SSR1-206ENST00000479365 RNF123Q5XPI4 1314 aa9.42□□□□□ -0.9
SSR1-206ENST00000479365 ATP5J2-PTCD1G3V325 749 aa9.42□□□□□ -0.9
SSR1-206ENST00000479365 FZD9O00144 591 aa9.42□□□□□ -0.9
SSR1-206ENST00000479365 KDM4AO75164 1064 aa9.42□□□□□ -0.9
SSR1-206ENST00000479365 GNAI1P63096 354 aa9.42□□□□□ -0.9
SSR1-206ENST00000479365 PUS10Q3MIT2 529 aaKnown RBP9.42□□□□□ -0.9
SSR1-206ENST00000479365 HSP90AB3PQ58FF7 597 aa9.42□□□□□ -0.9
SSR1-206ENST00000479365 CC2D2BQ6DHV5 1058 aa9.42□□□□□ -0.9
SSR1-206ENST00000479365 BANK1Q8NDB2 785 aa9.42□□□□□ -0.9
SSR1-206ENST00000479365 HLA-CQ95604 372 aa9.42□□□□□ -0.9
SSR1-206ENST00000479365 PHAXQ9H814 394 aaKnown RBP9.42□□□□□ -0.9
SSR1-206ENST00000479365 TRMT112Q9UI30 125 aaKnown RBP9.42□□□□□ -0.9
SSR1-206ENST00000479365 LAMB2P55268 1798 aa9.42□□□□□ -0.9
SSR1-206ENST00000479365 SH3TC1Q8TE82 1336 aa9.41□□□□□ -0.9
SSR1-206ENST00000479365 ZEB1P37275 1124 aaPredicted RBP9.41□□□□□ -0.9
SSR1-206ENST00000479365 MYSM1Q5VVJ2 828 aa9.41□□□□□ -0.9
SSR1-206ENST00000479365 TSPYL6Q8N831 410 aa9.41□□□□□ -0.9
SSR1-206ENST00000479365 FAM89AQ96GI7 184 aa9.41□□□□□ -0.9
SSR1-206ENST00000479365 TBC1D2Q9BYX2 928 aa9.41□□□□□ -0.9
SSR1-206ENST00000479365 TAF1DQ9H5J8 278 aaPredicted RBP9.41□□□□□ -0.9
SSR1-206ENST00000479365 HYPKQ9NX55 129 aa9.41□□□□□ -0.9
SSR1-206ENST00000479365 ATP6V0A2Q9Y487 856 aa9.41□□□□□ -0.9
SSR1-206ENST00000479365 NYAP1Q6ZVC0 841 aa9.4□□□□□ -0.9
SSR1-206ENST00000479365 RGS22Q8NE09 1264 aa9.4□□□□□ -0.9
SSR1-206ENST00000479365 TSR2Q969E8 191 aaKnown RBP9.4□□□□□ -0.9
SSR1-206ENST00000479365 KLRG1Q96E93 195 aa9.4□□□□□ -0.9
SSR1-206ENST00000479365 PRR14Q9BWN1 585 aa9.4□□□□□ -0.9
SSR1-206ENST00000479365 SNRKQ9NRH2 765 aa9.4□□□□□ -0.9
SSR1-206ENST00000479365 LTBP1Q14766 1721 aa9.39□□□□□ -0.91
SSR1-206ENST00000479365 DDX60Q8IY21 1712 aaKnown RBP9.39□□□□□ -0.91
SSR1-206ENST00000479365 DUOX1Q9NRD9 1551 aa9.39□□□□□ -0.91
SSR1-206ENST00000479365 HOXA2O43364 376 aa9.39□□□□□ -0.91
SSR1-206ENST00000479365 CLK2P49760 499 aaKnown RBP9.39□□□□□ -0.91
SSR1-206ENST00000479365 COPS2P61201 443 aa9.39□□□□□ -0.91
SSR1-206ENST00000479365 CALD1Q05682 793 aaKnown RBP9.39□□□□□ -0.91
SSR1-206ENST00000479365 GRAPQ13588 217 aa9.39□□□□□ -0.91
SSR1-206ENST00000479365 AOC3Q16853 763 aa9.39□□□□□ -0.91
SSR1-206ENST00000479365 RTL5Q5HYW3 569 aaPredicted RBP9.39□□□□□ -0.91
SSR1-206ENST00000479365 BLOC1S3Q6QNY0 202 aa9.39□□□□□ -0.91
SSR1-206ENST00000479365 WWC1Q8IX03 1113 aa9.39□□□□□ -0.91
SSR1-206ENST00000479365 JMYQ8N9B5 988 aa9.39□□□□□ -0.91
SSR1-206ENST00000479365 GRAPLQ8TC17 118 aaPredicted RBP9.39□□□□□ -0.91
SSR1-206ENST00000479365 RTFDC1Q9BY42 306 aaPredicted RBP9.39□□□□□ -0.91
SSR1-206ENST00000479365 MRS2Q9HD23 443 aa9.39□□□□□ -0.91
SSR1-206ENST00000479365 PCDHB3Q9Y5E6 796 aa9.39□□□□□ -0.91
SSR1-206ENST00000479365 ADAMTSL1Q8N6G6 1762 aa9.39□□□□□ -0.91
SSR1-206ENST00000479365 IQCA1LA6NCM1 817 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 MOXD2PA6NHM9 499 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 PPIP5K2O43314 1243 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 BBOX1O75936 387 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 NDUFV2P19404 249 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 EPHX2P34913 555 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 RFC5P40937 340 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 GUCA2AQ02747 115 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 TRIM28Q13263 835 aaKnown RBP9.38□□□□□ -0.91
SSR1-206ENST00000479365 SF3B3Q15393 1217 aaKnown RBP9.38□□□□□ -0.91
SSR1-206ENST00000479365 CCDC27Q2M243 656 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 GRIPAP1Q4V328 841 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 LDHDQ86WU2 507 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 SP8Q8IXZ3 490 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 GPC2Q8N158 579 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 LARGE2Q8N3Y3 721 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 JDP2Q8WYK2 163 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 CELF1Q92879 486 aaKnown RBP9.38□□□□□ -0.91
SSR1-206ENST00000479365 MYD88Q99836 296 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 HACL1Q9UJ83 578 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 SCN4AP35499 1836 aa9.38□□□□□ -0.91
SSR1-206ENST00000479365 PASKQ96RG2 1323 aa9.37□□□□□ -0.91
SSR1-206ENST00000479365 TAF1P21675 1872 aa9.37□□□□□ -0.91
SSR1-206ENST00000479365 ITGBL1O95965 494 aaPredicted RBP9.37□□□□□ -0.91
SSR1-206ENST00000479365 EPS15P42566 896 aa9.37□□□□□ -0.91
SSR1-206ENST00000479365 SCNN1DP51172 638 aa9.37□□□□□ -0.91
SSR1-206ENST00000479365 EIF6P56537 245 aaKnown RBP9.37□□□□□ -0.91
SSR1-206ENST00000479365 IRF5Q13568 498 aa9.37□□□□□ -0.91
SSR1-206ENST00000479365 EAPPQ56P03 285 aaPredicted RBP9.37□□□□□ -0.91
SSR1-206ENST00000479365 DPP8Q6V1X1 898 aaPredicted RBP9.37□□□□□ -0.91
SSR1-206ENST00000479365 DDX46Q7L014 1031 aaKnown RBP9.37□□□□□ -0.91
SSR1-206ENST00000479365 RIC3Q7Z5B4 369 aa9.37□□□□□ -0.91
SSR1-206ENST00000479365 MPNDQ8N594 471 aa9.37□□□□□ -0.91
SSR1-206ENST00000479365 JARID2Q92833 1246 aaPredicted RBP9.37□□□□□ -0.91
SSR1-206ENST00000479365 GJA3Q9Y6H8 435 aa9.37□□□□□ -0.91
SSR1-206ENST00000479365 LRRC37AA6NMS7 1700 aa9.36□□□□□ -0.91
SSR1-206ENST00000479365 IRS4O14654 1257 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms