RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 APOBRQ0VD83 1088 aa15.93■□□□□ 0.14
NPHP4-207ENST00000470763 SMARCC2Q8TAQ2 1214 aa15.93■□□□□ 0.14
NPHP4-207ENST00000470763 DPF2Q92785 391 aa15.93■□□□□ 0.14
NPHP4-207ENST00000470763 H3BQF6 201 aa15.93■□□□□ 0.14
NPHP4-207ENST00000470763 KCNQ3O43525 872 aa15.93■□□□□ 0.14
NPHP4-207ENST00000470763 KCNJ6P48051 423 aa15.93■□□□□ 0.14
NPHP4-207ENST00000470763 SRRTQ9BXP5 876 aaKnown RBP15.93■□□□□ 0.14
NPHP4-207ENST00000470763 ARFGAP3Q9NP61 516 aa15.93■□□□□ 0.14
NPHP4-207ENST00000470763 CYP21A2P08686 494 aa15.93■□□□□ 0.14
NPHP4-207ENST00000470763 MEX3CQ5U5Q3 659 aaKnown RBP15.93■□□□□ 0.14
NPHP4-207ENST00000470763 USHBP1Q8N6Y0 703 aa15.93■□□□□ 0.14
NPHP4-207ENST00000470763 WDR24Q96S15 920 aa15.93■□□□□ 0.14
NPHP4-207ENST00000470763 PARD6BQ9BYG5 372 aa15.93■□□□□ 0.14
NPHP4-207ENST00000470763 ZSWIM4Q9H7M6 989 aa15.93■□□□□ 0.14
NPHP4-207ENST00000470763 SNRKQ9NRH2 765 aa15.93■□□□□ 0.14
NPHP4-207ENST00000470763 TUBB4AP04350 444 aa15.92■□□□□ 0.14
NPHP4-207ENST00000470763 G3BP1Q13283 466 aaKnown RBP eCLIP15.92■□□□□ 0.14
NPHP4-207ENST00000470763 MTX1Q13505 466 aa15.92■□□□□ 0.14
NPHP4-207ENST00000470763 KRT32Q14532 448 aa15.92■□□□□ 0.14
NPHP4-207ENST00000470763 NCAPHQ15003 741 aa15.92■□□□□ 0.14
NPHP4-207ENST00000470763 OTUD7BQ6GQQ9 843 aa15.92■□□□□ 0.14
NPHP4-207ENST00000470763 NAA16Q6N069 864 aaPredicted RBP15.92■□□□□ 0.14
NPHP4-207ENST00000470763 AK7Q96M32 723 aa15.92■□□□□ 0.14
NPHP4-207ENST00000470763 RRP15Q9Y3B9 282 aaKnown RBP15.92■□□□□ 0.14
NPHP4-207ENST00000470763 LRRC37A3O60309 1634 aa15.92■□□□□ 0.14
NPHP4-207ENST00000470763 DHX16O60231 1041 aaKnown RBP15.92■□□□□ 0.14
NPHP4-207ENST00000470763 SF3A1Q15459 793 aaKnown RBP15.92■□□□□ 0.14
NPHP4-207ENST00000470763 TSGA10IPQ3SY00 556 aa15.92■□□□□ 0.14
NPHP4-207ENST00000470763 SRLQ86TD4 932 aa15.92■□□□□ 0.14
NPHP4-207ENST00000470763 CWC15Q9P013 229 aaKnown RBP15.92■□□□□ 0.14
NPHP4-207ENST00000470763 VWA3AA6NCI4 1184 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 CASQ1P31415 396 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 GNG11P61952 73 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 FUT8Q9BYC5 575 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 MAP3K2Q9Y2U5 619 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 CCP110O43303 1012 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 ATP8B1O43520 1251 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 SLC3A2P08195 630 aaKnown RBP15.91■□□□□ 0.14
NPHP4-207ENST00000470763 TPM1P09493 284 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 PPP2R3AQ06190 1150 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 FBXO18Q8NFZ0 1043 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 USP6P35125 1406 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 SBNO1A3KN83 1393 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 USP31Q70CQ4 1352 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 POLR3DP05423 398 aaPredicted RBP15.91■□□□□ 0.14
NPHP4-207ENST00000470763 NOP2P46087 812 aaKnown RBP15.91■□□□□ 0.14
NPHP4-207ENST00000470763 CFAP100Q494V2 611 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 GOLGA5Q8TBA6 731 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 EFCC1Q9HA90 598 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 ATG3Q9NT62 314 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 NEDD4P46934 1319 aa15.91■□□□□ 0.14
NPHP4-207ENST00000470763 TMEM232C9JQI7 657 aa15.9■□□□□ 0.14
NPHP4-207ENST00000470763 SERPINC1P01008 464 aa15.9■□□□□ 0.14
NPHP4-207ENST00000470763 UBASH3AP57075 661 aa15.9■□□□□ 0.14
NPHP4-207ENST00000470763 HSP90AA4PQ58FG1 418 aa15.9■□□□□ 0.14
NPHP4-207ENST00000470763 STOX1Q6ZVD7 989 aa15.9■□□□□ 0.14
NPHP4-207ENST00000470763 GPR161Q8N6U8 529 aaKnown RBP15.9■□□□□ 0.14
NPHP4-207ENST00000470763 CLIC4Q9Y696 253 aa15.9■□□□□ 0.14
NPHP4-207ENST00000470763 PFKFB2O60825 505 aa15.9■□□□□ 0.14
NPHP4-207ENST00000470763 ALDH1L1O75891 902 aa15.9■□□□□ 0.14
NPHP4-207ENST00000470763 TEFQ10587 303 aa15.9■□□□□ 0.14
NPHP4-207ENST00000470763 STK38Q15208 465 aa15.9■□□□□ 0.14
NPHP4-207ENST00000470763 ADALQ6DHV7 355 aa15.9■□□□□ 0.14
NPHP4-207ENST00000470763 COL22A1Q8NFW1 1626 aaPredicted RBP15.9■□□□□ 0.14
NPHP4-207ENST00000470763 KIF1AQ12756 1690 aa15.9■□□□□ 0.14
NPHP4-207ENST00000470763 CHST3Q7LGC8 479 aa15.89■□□□□ 0.13
NPHP4-207ENST00000470763 SUCLG2Q96I99 432 aa15.89■□□□□ 0.13
NPHP4-207ENST00000470763 BICC1Q9H694 974 aaKnown RBP15.89■□□□□ 0.13
NPHP4-207ENST00000470763 PPP2R2CQ9Y2T4 447 aa15.89■□□□□ 0.13
NPHP4-207ENST00000470763 EIF4A1P60842 406 aaKnown RBP15.89■□□□□ 0.13
NPHP4-207ENST00000470763 PSME1Q06323 249 aa15.89■□□□□ 0.13
NPHP4-207ENST00000470763 USPL1Q5W0Q7 1092 aa15.89■□□□□ 0.13
NPHP4-207ENST00000470763 CHMP4CQ96CF2 233 aa15.89■□□□□ 0.13
NPHP4-207ENST00000470763 HSD3B7Q9H2F3 369 aa15.89■□□□□ 0.13
NPHP4-207ENST00000470763 VPS18Q9P253 973 aa15.89■□□□□ 0.13
NPHP4-207ENST00000470763 NLRP12P59046 1061 aa15.89■□□□□ 0.13
NPHP4-207ENST00000470763 MCM6Q14566 821 aa15.89■□□□□ 0.13
NPHP4-207ENST00000470763 LONRF2Q1L5Z9 754 aa15.89■□□□□ 0.13
NPHP4-207ENST00000470763 EXOC4Q96A65 974 aa15.89■□□□□ 0.13
NPHP4-207ENST00000470763 BPIFA3Q9BQP9 254 aa15.89■□□□□ 0.13
NPHP4-207ENST00000470763 TAOK2Q9UL54 1235 aa15.89■□□□□ 0.13
NPHP4-207ENST00000470763 PHF8Q9UPP1 1060 aa15.89■□□□□ 0.13
NPHP4-207ENST00000470763 FOXR1Q6PIV2 292 aa15.88■□□□□ 0.13
NPHP4-207ENST00000470763 LLPHQ9BRT6 129 aaKnown RBP15.88■□□□□ 0.13
NPHP4-207ENST00000470763 LGR6Q9HBX8 967 aa15.88■□□□□ 0.13
NPHP4-207ENST00000470763 CCDC9Q9Y3X0 531 aaKnown RBP15.88■□□□□ 0.13
NPHP4-207ENST00000470763 ACTN2P35609 894 aa15.88■□□□□ 0.13
NPHP4-207ENST00000470763 PROSER3Q2NL68 480 aa15.88■□□□□ 0.13
NPHP4-207ENST00000470763 ZNF202O95125 648 aa15.87■□□□□ 0.13
NPHP4-207ENST00000470763 ADAMTS2O95450 1211 aa15.87■□□□□ 0.13
NPHP4-207ENST00000470763 MAP3K9P80192 1104 aa15.87■□□□□ 0.13
NPHP4-207ENST00000470763 DHX58Q96C10 678 aa15.87■□□□□ 0.13
NPHP4-207ENST00000470763 C8orf37Q96NL8 207 aa15.87■□□□□ 0.13
NPHP4-207ENST00000470763 MRFAP1Q9Y605 127 aa15.87■□□□□ 0.13
NPHP4-207ENST00000470763 AFF2P51816 1311 aa15.87■□□□□ 0.13
NPHP4-207ENST00000470763 ANKARQ7Z5J8 1434 aa15.87■□□□□ 0.13
NPHP4-207ENST00000470763 ZSCAN12O43309 604 aa15.87■□□□□ 0.13
NPHP4-207ENST00000470763 TOP1P11387 765 aaKnown RBP15.87■□□□□ 0.13
NPHP4-207ENST00000470763 RSRC2Q7L4I2 434 aaKnown RBP15.87■□□□□ 0.13
NPHP4-207ENST00000470763 LINC00301Q8NCQ3 95 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms